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The map label for this gene is soxA [H]

Identifier: 104779489

GI number: 104779489

Start: 209956

End: 211347

Strand: Reverse

Name: soxA [H]

Synonym: PSEEN0201

Alternate gene names: 104779489

Gene position: 211347-209956 (Counterclockwise)

Preceding gene: 104779490

Following gene: 104779488

Centisome position: 3.59

GC content: 67.74

Gene sequence:

>1392_bases
ATGGCCCGCCAGATCCTGCTCAATGCCTTCAACATGAACTGCATCGGGCACATCAACCATGGCCTGTGGACCCACCCACG
GGACACCTCGACCCAGTACAAGACCCTGGAATACTGGACCGACCTCGCCCGCCTGCTGGAGCGCGGGCTGTTCGACGGCC
TGTTCATCGCCGACATCGTCGGCACCTACGACGTCTACGGGCAGTCGGTGGACGTGCCGTTGAAAGAGGCCATCCAGCTG
CCGGTCAACGACCCGCTGCTGCTCGTCTCGGCCATGGCTGCGGTGACGAAACACCTGGGCTTCGGCCTCACCGCCAACCT
GACCTACGAGGCGCCCTACCTGTTCGCCCGGCGCCTCTCCACCCTCGACCACCTGAGCAACGGCCGGGTCGGCTGGAACA
TCGTCACCGGCTACCTCGACAGCGCCGCCCGGGCCATGGGCCTGGAGCAGCAACCTGAGCACGACCGCCGCTACGACCAG
GCCGACGAGTACCTGCAGGTGCTGTACAAGCTGCTCGAAGGCAGCTGGGACGACGACGCCGTGGTCGCCGATCGCGAACA
ACGCGTGTATGCGCGCCCGGACAAAGTGCACAAGGTCGAGCACCACGGCGAGTTCTACAAGGTCGAGGGCTATCACCTGT
GCGAACCCTCGCCCCAGCGCACCCCGGTGCTGTTCCAGGCGGGCAGTTCGGCGCGCGGCCTGGCGTTCGCCGGCAATCAC
GCCGAGTGCGTGTTCATCAGCGGCCAGGACAAGCCGTCCACCCGCGCCCAGGTCGACAAGGTGCGCGCAGCGGCCAAGGC
GGCCGGGCGTGATCCCCAGGCGGTGAAGGTGTTCATGGGCCTCACCGTGATCGTCGCCCCGACCGAGGAGCAGGCCCGCG
CCAAGCATGCCGAGTACCTGCGCCACGCCAGTGCCGAGGCAGGCGTGGCGCACTTCGCCAGCTCCACCGGCATCGACTTC
TCGCGCTACGAACTGGACGAGCCCATCGGCTTCGCCAAGGGTAACGCCATCCAGTCTGCCACCCGCCAGCTACAGGACAG
CGCCTGGACCCGCCGTCGCCTGCTCGAACAGCACGCCCTGGGCGGGCGCTACGTGACCCTGGTCGGCGCCCCGGAACAAG
TAGCCGAGCAGTTGATTGCCTGGATCGACGAAACCGGCCTGGATGGCTTCAACCTGGCGCGCACCGTCACCCCGGAGAGC
TACGAGGACTTCATCGACCTGGTGATCCCCGAACTGCAGCGCCGCGGCCGCTACAAGACCGCCTACGCCGAGGGCAGCCT
GCGCCAGAAGCTGTTCGCCACGCCCCACGCCCACCTGCCCGCCGACCATCCCGGCGCCGCCTACCGCAACCCACCTGTCC
CTGCCCCGACTGGAGCCCTGCACCATGCTTGA

Upstream 100 bases:

>100_bases
CTCGGGTGCACACCCTGCACGACCCGGTGCGCTGGAAGTACCACGCCATCGGCAACTACTACCTCAACGACGAGAAGCCA
CCGCGCCGGGGGACCATCTG

Downstream 100 bases:

>100_bases
GAAACTGTTCCGGCCCGTCGCGGCCATCGCCCTGGGCCTCGGCCTGTCCGCCGCCGCCTTCGCCGCCGAGCCACTGAAGA
TCGGCACCACTGCCGCGTTC

Product: monooxygenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 463; Mature: 462

Protein sequence:

>463_residues
MARQILLNAFNMNCIGHINHGLWTHPRDTSTQYKTLEYWTDLARLLERGLFDGLFIADIVGTYDVYGQSVDVPLKEAIQL
PVNDPLLLVSAMAAVTKHLGFGLTANLTYEAPYLFARRLSTLDHLSNGRVGWNIVTGYLDSAARAMGLEQQPEHDRRYDQ
ADEYLQVLYKLLEGSWDDDAVVADREQRVYARPDKVHKVEHHGEFYKVEGYHLCEPSPQRTPVLFQAGSSARGLAFAGNH
AECVFISGQDKPSTRAQVDKVRAAAKAAGRDPQAVKVFMGLTVIVAPTEEQARAKHAEYLRHASAEAGVAHFASSTGIDF
SRYELDEPIGFAKGNAIQSATRQLQDSAWTRRRLLEQHALGGRYVTLVGAPEQVAEQLIAWIDETGLDGFNLARTVTPES
YEDFIDLVIPELQRRGRYKTAYAEGSLRQKLFATPHAHLPADHPGAAYRNPPVPAPTGALHHA

Sequences:

>Translated_463_residues
MARQILLNAFNMNCIGHINHGLWTHPRDTSTQYKTLEYWTDLARLLERGLFDGLFIADIVGTYDVYGQSVDVPLKEAIQL
PVNDPLLLVSAMAAVTKHLGFGLTANLTYEAPYLFARRLSTLDHLSNGRVGWNIVTGYLDSAARAMGLEQQPEHDRRYDQ
ADEYLQVLYKLLEGSWDDDAVVADREQRVYARPDKVHKVEHHGEFYKVEGYHLCEPSPQRTPVLFQAGSSARGLAFAGNH
AECVFISGQDKPSTRAQVDKVRAAAKAAGRDPQAVKVFMGLTVIVAPTEEQARAKHAEYLRHASAEAGVAHFASSTGIDF
SRYELDEPIGFAKGNAIQSATRQLQDSAWTRRRLLEQHALGGRYVTLVGAPEQVAEQLIAWIDETGLDGFNLARTVTPES
YEDFIDLVIPELQRRGRYKTAYAEGSLRQKLFATPHAHLPADHPGAAYRNPPVPAPTGALHHA
>Mature_462_residues
ARQILLNAFNMNCIGHINHGLWTHPRDTSTQYKTLEYWTDLARLLERGLFDGLFIADIVGTYDVYGQSVDVPLKEAIQLP
VNDPLLLVSAMAAVTKHLGFGLTANLTYEAPYLFARRLSTLDHLSNGRVGWNIVTGYLDSAARAMGLEQQPEHDRRYDQA
DEYLQVLYKLLEGSWDDDAVVADREQRVYARPDKVHKVEHHGEFYKVEGYHLCEPSPQRTPVLFQAGSSARGLAFAGNHA
ECVFISGQDKPSTRAQVDKVRAAAKAAGRDPQAVKVFMGLTVIVAPTEEQARAKHAEYLRHASAEAGVAHFASSTGIDFS
RYELDEPIGFAKGNAIQSATRQLQDSAWTRRRLLEQHALGGRYVTLVGAPEQVAEQLIAWIDETGLDGFNLARTVTPESY
EDFIDLVIPELQRRGRYKTAYAEGSLRQKLFATPHAHLPADHPGAAYRNPPVPAPTGALHHA

Specific function: Part of a pathway to remove covalently bound sulfur from dibenzothiophene (DBT) without breaking carbon-carbon bonds. This enzyme metabolizes DBT-sulfone (DBTO2 or DBT 5,5-dioxide) to 2- hydroxybiphenyl (2-HBP) [H]

COG id: COG2141

COG function: function code C; Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ntaA/snaA/soxA(dszA) monooxygenase family [H]

Homologues:

Organism=Escherichia coli, GI1787247, Length=230, Percent_Identity=30.4347826086957, Blast_Score=78, Evalue=1e-15,
Organism=Escherichia coli, GI1787166, Length=226, Percent_Identity=27.4336283185841, Blast_Score=68, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011251
- InterPro:   IPR016048
- InterPro:   IPR016215 [H]

Pfam domain/function: PF00296 Bac_luciferase [H]

EC number: NA

Molecular weight: Translated: 51401; Mature: 51270

Theoretical pI: Translated: 6.60; Mature: 6.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARQILLNAFNMNCIGHINHGLWTHPRDTSTQYKTLEYWTDLARLLERGLFDGLFIADIV
CCHHHEEHHHCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
GTYDVYGQSVDVPLKEAIQLPVNDPLLLVSAMAAVTKHLGFGLTANLTYEAPYLFARRLS
HHHHHCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHH
TLDHLSNGRVGWNIVTGYLDSAARAMGLEQQPEHDRRYDQADEYLQVLYKLLEGSWDDDA
HHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC
VVADREQRVYARPDKVHKVEHHGEFYKVEGYHLCEPSPQRTPVLFQAGSSARGLAFAGNH
EEECCCCHHCCCCHHHHHHHHCCCEEEECCEEECCCCCCCCCEEEECCCCCCCEEEECCC
AECVFISGQDKPSTRAQVDKVRAAAKAAGRDPQAVKVFMGLTVIVAPTEEQARAKHAEYL
CEEEEECCCCCCCHHHHHHHHHHHHHHCCCCHHHEEEEECEEEEEECCHHHHHHHHHHHH
RHASAEAGVAHFASSTGIDFSRYELDEPIGFAKGNAIQSATRQLQDSAWTRRRLLEQHAL
HHCCCHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
GGRYVTLVGAPEQVAEQLIAWIDETGLDGFNLARTVTPESYEDFIDLVIPELQRRGRYKT
CCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHHHHHHHHHCCCCEE
AYAEGSLRQKLFATPHAHLPADHPGAAYRNPPVPAPTGALHHA
ECCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
ARQILLNAFNMNCIGHINHGLWTHPRDTSTQYKTLEYWTDLARLLERGLFDGLFIADIV
CHHHEEHHHCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
GTYDVYGQSVDVPLKEAIQLPVNDPLLLVSAMAAVTKHLGFGLTANLTYEAPYLFARRLS
HHHHHCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHH
TLDHLSNGRVGWNIVTGYLDSAARAMGLEQQPEHDRRYDQADEYLQVLYKLLEGSWDDDA
HHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC
VVADREQRVYARPDKVHKVEHHGEFYKVEGYHLCEPSPQRTPVLFQAGSSARGLAFAGNH
EEECCCCHHCCCCHHHHHHHHCCCEEEECCEEECCCCCCCCCEEEECCCCCCCEEEECCC
AECVFISGQDKPSTRAQVDKVRAAAKAAGRDPQAVKVFMGLTVIVAPTEEQARAKHAEYL
CEEEEECCCCCCCHHHHHHHHHHHHHHCCCCHHHEEEEECEEEEEECCHHHHHHHHHHHH
RHASAEAGVAHFASSTGIDFSRYELDEPIGFAKGNAIQSATRQLQDSAWTRRRLLEQHAL
HHCCCHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
GGRYVTLVGAPEQVAEQLIAWIDETGLDGFNLARTVTPESYEDFIDLVIPELQRRGRYKT
CCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHHHHHHHHHCCCCEE
AYAEGSLRQKLFATPHAHLPADHPGAAYRNPPVPAPTGALHHA
ECCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7961424; 7574582 [H]