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The map label for this gene is ytjP [H]

Identifier: 104779465

GI number: 104779465

Start: 177598

End: 179328

Strand: Reverse

Name: ytjP [H]

Synonym: PSEEN0172

Alternate gene names: 104779465

Gene position: 179328-177598 (Counterclockwise)

Preceding gene: 104779466

Following gene: 104779464

Centisome position: 3.05

GC content: 63.37

Gene sequence:

>1731_bases
ATGCCATTTTCCAAGCTTTCCGCCGCTTCCGTGATGCTGGCCAGCCTGGCGATGTTCTCGATTCCGGCCCACGCCAACCT
CTCCCAGCAACAGTCCGCCGCCATCATCAAGGCCTACGACGGCAGCAACCCGGCCGACTTCAAGCAGTTCCTCGGCAAAC
TCGCCAGCAGCGACCTGGCCAAGGCCGACAAGCTCGATGACACCCTCAAGCTGTACCTGGCCGGCAAGCCGCTGAGCGCC
GAGCAGCAGGACGAGGTCAACCGCCTGCTGGGCCTGTACACCCGGATCAAGTACGGCGAGGCCGCCAAGCAGACCCTGCG
CGAACTGGTGGAGATCCCGACGGTGCGCAAAGAGGGCGTGCCGCAGCACGAGAACCCGGAATTCCTCAAGATCGCCGACA
AGATCAAGGCCCTGGCCGAAGGCTTCGGCCTGCAGTTCCGCAATGTCGACAACCGTGTTTACGAGATCTCCCTCGGCGAA
GGCAAGGAAGTGATCGGCATCCACGCCCACGCCGACGTGGTGCCGGTGACCCCGGAAAACTGGAAACTCAAGGACGGCAC
CAAACTCGATCCGTTCAAGGTCACCCTGGTGGGTGACCGCATGTACGGCCGTGGCACCGAGGACGACAAGAACGGCATCG
TCGTCGCGCTCTACGCGTTGAAAGTGGCCAAGGACGAAAAACTGCCCCTGGCCCGCCAGTTCAAGCTGCTGGTGGACACC
ACCGAGGAAACCACCGGCGACGCGATCCCCTATTATTTCGCACGCAACGCCACCCCCGACTACAACCTGGCGCTGGACGG
CGGCTACCCGGTGGTGATCGCCGAGAAAGGCTACGGCACCGTCATGGCGACCTTCACCAAACGCGCCGGTACCGGCCAAG
GCGCCGAAGTGGTGAAGCTGACCGGTGGCCTGGCCACCAACCAGATCCCCGGCAGCTCGGTGGCAACGCTGATCGCTGAC
AAACCAGCTGACGTGGCCAAGGCCCTGGAGAAAGCTGGTGCCGAGTACGTCAAGCAACACAACGGCGACTTCAGCATCGA
CGCCAAGGCTGATGGCCAGCAGGTGCTGCTGACCGTGACCGGCGTGTCGGCGCACTCCTCCGAGCCTGAGTCCGGGGTCA
ACCCGGTGGCGCGCATGCTCGACTTCCTCAACGGTGTGCAGAAGCAAGTGCCGCTCAAGCACAACCACATCACCGACGCC
GCCCGCTACGCCGCTGATAACTGGGGCCTGGACTACCTGGGCAACAAGCTCGGTGTGGGCTTCAAGGATGACTTCATGGG
CCCGCTGACCACCTCGCTGACCTTCGTCGGCCTGGATGACAAAGCGCTGAAGCTGGCGGTGAACCTGCGTATTCCCAAAG
GCAAGTCGCTCGAGACGCTCAAGTCCGAGATCTCCGACAAGCTCGGTGACTGGGCGCGTACCAGCCACACTTCGGTGGCC
TTCGACTACACCCTCGACGAGCCGATGTATCGCAACCCCGAGGGCGAGTGGGTCAAGGCCCTGCTGGCCGTGGCCAGCGA
GAACCTGGGCATGAAGCACGCGTTCGGTACCTCCGCCGGTGCCACCTCGGTGCACGACCTGCCCAACGGCGTGCAGTTCG
GCCTGGCCATGCCGGACGTGAAGTACACCGGGCACAACGACAACGAGTTCAAGACCGTGGAGCAGTTCATGCTCGACCTG
CAGATCGTCAGCGAGATGGTGGCGCGGATCGGTCAGATGCCGAAGCTCTGA

Upstream 100 bases:

>100_bases
TGCCACCTCTCCCAAGGAGGCGTGCATTGGTGTTAGCGTGGGCATCTTCCCGTTTGCGTAAACGGGCACCTCCCACTCTT
GCAAAGGAATGCGCACGCCC

Downstream 100 bases:

>100_bases
AAGCGCCTCCCTGTAGGAGCGGCTTCAGCCGCGAAACAAACGACGCGATGGATAGCACCGGCTGCGCCGGTGTTCGCGGC
TGAAGCCGCTCCTACTGGGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 576; Mature: 575

Protein sequence:

>576_residues
MPFSKLSAASVMLASLAMFSIPAHANLSQQQSAAIIKAYDGSNPADFKQFLGKLASSDLAKADKLDDTLKLYLAGKPLSA
EQQDEVNRLLGLYTRIKYGEAAKQTLRELVEIPTVRKEGVPQHENPEFLKIADKIKALAEGFGLQFRNVDNRVYEISLGE
GKEVIGIHAHADVVPVTPENWKLKDGTKLDPFKVTLVGDRMYGRGTEDDKNGIVVALYALKVAKDEKLPLARQFKLLVDT
TEETTGDAIPYYFARNATPDYNLALDGGYPVVIAEKGYGTVMATFTKRAGTGQGAEVVKLTGGLATNQIPGSSVATLIAD
KPADVAKALEKAGAEYVKQHNGDFSIDAKADGQQVLLTVTGVSAHSSEPESGVNPVARMLDFLNGVQKQVPLKHNHITDA
ARYAADNWGLDYLGNKLGVGFKDDFMGPLTTSLTFVGLDDKALKLAVNLRIPKGKSLETLKSEISDKLGDWARTSHTSVA
FDYTLDEPMYRNPEGEWVKALLAVASENLGMKHAFGTSAGATSVHDLPNGVQFGLAMPDVKYTGHNDNEFKTVEQFMLDL
QIVSEMVARIGQMPKL

Sequences:

>Translated_576_residues
MPFSKLSAASVMLASLAMFSIPAHANLSQQQSAAIIKAYDGSNPADFKQFLGKLASSDLAKADKLDDTLKLYLAGKPLSA
EQQDEVNRLLGLYTRIKYGEAAKQTLRELVEIPTVRKEGVPQHENPEFLKIADKIKALAEGFGLQFRNVDNRVYEISLGE
GKEVIGIHAHADVVPVTPENWKLKDGTKLDPFKVTLVGDRMYGRGTEDDKNGIVVALYALKVAKDEKLPLARQFKLLVDT
TEETTGDAIPYYFARNATPDYNLALDGGYPVVIAEKGYGTVMATFTKRAGTGQGAEVVKLTGGLATNQIPGSSVATLIAD
KPADVAKALEKAGAEYVKQHNGDFSIDAKADGQQVLLTVTGVSAHSSEPESGVNPVARMLDFLNGVQKQVPLKHNHITDA
ARYAADNWGLDYLGNKLGVGFKDDFMGPLTTSLTFVGLDDKALKLAVNLRIPKGKSLETLKSEISDKLGDWARTSHTSVA
FDYTLDEPMYRNPEGEWVKALLAVASENLGMKHAFGTSAGATSVHDLPNGVQFGLAMPDVKYTGHNDNEFKTVEQFMLDL
QIVSEMVARIGQMPKL
>Mature_575_residues
PFSKLSAASVMLASLAMFSIPAHANLSQQQSAAIIKAYDGSNPADFKQFLGKLASSDLAKADKLDDTLKLYLAGKPLSAE
QQDEVNRLLGLYTRIKYGEAAKQTLRELVEIPTVRKEGVPQHENPEFLKIADKIKALAEGFGLQFRNVDNRVYEISLGEG
KEVIGIHAHADVVPVTPENWKLKDGTKLDPFKVTLVGDRMYGRGTEDDKNGIVVALYALKVAKDEKLPLARQFKLLVDTT
EETTGDAIPYYFARNATPDYNLALDGGYPVVIAEKGYGTVMATFTKRAGTGQGAEVVKLTGGLATNQIPGSSVATLIADK
PADVAKALEKAGAEYVKQHNGDFSIDAKADGQQVLLTVTGVSAHSSEPESGVNPVARMLDFLNGVQKQVPLKHNHITDAA
RYAADNWGLDYLGNKLGVGFKDDFMGPLTTSLTFVGLDDKALKLAVNLRIPKGKSLETLKSEISDKLGDWARTSHTSVAF
DYTLDEPMYRNPEGEWVKALLAVASENLGMKHAFGTSAGATSVHDLPNGVQFGLAMPDVKYTGHNDNEFKTVEQFMLDLQ
IVSEMVARIGQMPKL

Specific function: Unknown

COG id: COG0624

COG function: function code E; Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M20A family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001261
- InterPro:   IPR010964
- InterPro:   IPR002933
- InterPro:   IPR011650 [H]

Pfam domain/function: PF01546 Peptidase_M20 [H]

EC number: NA

Molecular weight: Translated: 62432; Mature: 62301

Theoretical pI: Translated: 6.12; Mature: 6.12

Prosite motif: PS00758 ARGE_DAPE_CPG2_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPFSKLSAASVMLASLAMFSIPAHANLSQQQSAAIIKAYDGSNPADFKQFLGKLASSDLA
CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHH
KADKLDDTLKLYLAGKPLSAEQQDEVNRLLGLYTRIKYGEAAKQTLRELVEIPTVRKEGV
HHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHCCC
PQHENPEFLKIADKIKALAEGFGLQFRNVDNRVYEISLGEGKEVIGIHAHADVVPVTPEN
CCCCCCHHHHHHHHHHHHHHHCCCEEECCCCEEEEEECCCCCEEEEEEECCCEEECCCCC
WKLKDGTKLDPFKVTLVGDRMYGRGTEDDKNGIVVALYALKVAKDEKLPLARQFKLLVDT
EEECCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEEEEEEECCCCCCCCHHHHEEEEEEC
TEETTGDAIPYYFARNATPDYNLALDGGYPVVIAEKGYGTVMATFTKRAGTGQGAEVVKL
CCCCCCCCCCEEEECCCCCCCEEEECCCEEEEEEECCCCEEEEEEHHCCCCCCCCEEEEE
TGGLATNQIPGSSVATLIADKPADVAKALEKAGAEYVKQHNGDFSIDAKADGQQVLLTVT
ECCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCEEEEEEE
GVSAHSSEPESGVNPVARMLDFLNGVQKQVPLKHNHITDAARYAADNWGLDYLGNKLGVG
ECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCHHHCCCCCCCC
FKDDFMGPLTTSLTFVGLDDKALKLAVNLRIPKGKSLETLKSEISDKLGDWARTSHTSVA
CCHHCCCCHHHCEEEEECCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCEEE
FDYTLDEPMYRNPEGEWVKALLAVASENLGMKHAFGTSAGATSVHDLPNGVQFGLAMPDV
EEEECCCCCCCCCCHHHHHHHHHHHHCCCCCEECCCCCCCCCCHHCCCCCCEECEECCCE
KYTGHNDNEFKTVEQFMLDLQIVSEMVARIGQMPKL
EECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
PFSKLSAASVMLASLAMFSIPAHANLSQQQSAAIIKAYDGSNPADFKQFLGKLASSDLA
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHH
KADKLDDTLKLYLAGKPLSAEQQDEVNRLLGLYTRIKYGEAAKQTLRELVEIPTVRKEGV
HHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHCCC
PQHENPEFLKIADKIKALAEGFGLQFRNVDNRVYEISLGEGKEVIGIHAHADVVPVTPEN
CCCCCCHHHHHHHHHHHHHHHCCCEEECCCCEEEEEECCCCCEEEEEEECCCEEECCCCC
WKLKDGTKLDPFKVTLVGDRMYGRGTEDDKNGIVVALYALKVAKDEKLPLARQFKLLVDT
EEECCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEEEEEEECCCCCCCCHHHHEEEEEEC
TEETTGDAIPYYFARNATPDYNLALDGGYPVVIAEKGYGTVMATFTKRAGTGQGAEVVKL
CCCCCCCCCCEEEECCCCCCCEEEECCCEEEEEEECCCCEEEEEEHHCCCCCCCCEEEEE
TGGLATNQIPGSSVATLIADKPADVAKALEKAGAEYVKQHNGDFSIDAKADGQQVLLTVT
ECCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCEEEEEEE
GVSAHSSEPESGVNPVARMLDFLNGVQKQVPLKHNHITDAARYAADNWGLDYLGNKLGVG
ECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCHHHCCCCCCCC
FKDDFMGPLTTSLTFVGLDDKALKLAVNLRIPKGKSLETLKSEISDKLGDWARTSHTSVA
CCHHCCCCHHHCEEEEECCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCEEE
FDYTLDEPMYRNPEGEWVKALLAVASENLGMKHAFGTSAGATSVHDLPNGVQFGLAMPDV
EEEECCCCCCCCCCHHHHHHHHHHHHCCCCCEECCCCCCCCCCHHCCCCCCEECEECCCE
KYTGHNDNEFKTVEQFMLDLQIVSEMVARIGQMPKL
EECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]