Click here to switch to the map view.

The map label for this gene is 104779418

Identifier: 104779418

GI number: 104779418

Start: 104835

End: 105152

Strand: Reverse

Name: 104779418

Synonym: PSEEN0111

Alternate gene names: NA

Gene position: 105152-104835 (Counterclockwise)

Preceding gene: 104779419

Following gene: 104779417

Centisome position: 1.79

GC content: 65.09

Gene sequence:

>318_bases
ATGTCCCGTAATCATCTGTTTGGCGCCGCCCTGTTGCTGGTCTTCACCGGCGCAGCCAATGCCACCAGCTTCGTCGTCAC
CACCGATGCCGTGGTGGGCGCCGTCGCCGCCACCACCGATGCCACCTCCGACATTTCCTCGTCGTTCCGTGACGACAAGA
TCGTCCAGGCCGCCCGCGACGATGCCGCCAGCTTCGTTGGCAGCGAAGGCGCGATTCGCGGCGCCAAGCTGGAAAGCGCA
TTTGTGCACATCCGCCAGCAACTGCCTGAGCTGCAAGCCAGCGACGCCCAACTGGCACGCGCCATCCTCGCGCTCTGA

Upstream 100 bases:

>100_bases
TACGCTTGTCCTACACGCCGGGTAGAAAACGTACCGTGACGAACCCAGCGAGCGTCCGATAAACAGATTCACCCAGCCCC
TGTGCAGGAGTCCCTCGACC

Downstream 100 bases:

>100_bases
AAACCCGGCTGCAAAAACCGGATTCACTGGCCCTGCCCAGGGAATCCGGAGTAGCCTTCGCCGCCTGAGATCATCGCCCC
CAGAAAGCCCATGCGTTATC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 105; Mature: 104

Protein sequence:

>105_residues
MSRNHLFGAALLLVFTGAANATSFVVTTDAVVGAVAATTDATSDISSSFRDDKIVQAARDDAASFVGSEGAIRGAKLESA
FVHIRQQLPELQASDAQLARAILAL

Sequences:

>Translated_105_residues
MSRNHLFGAALLLVFTGAANATSFVVTTDAVVGAVAATTDATSDISSSFRDDKIVQAARDDAASFVGSEGAIRGAKLESA
FVHIRQQLPELQASDAQLARAILAL
>Mature_104_residues
SRNHLFGAALLLVFTGAANATSFVVTTDAVVGAVAATTDATSDISSSFRDDKIVQAARDDAASFVGSEGAIRGAKLESAF
VHIRQQLPELQASDAQLARAILAL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10848; Mature: 10717

Theoretical pI: Translated: 4.96; Mature: 4.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRNHLFGAALLLVFTGAANATSFVVTTDAVVGAVAATTDATSDISSSFRDDKIVQAARD
CCCCHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHCCCCHHHHHHHHCHHHHHHHHHH
DAASFVGSEGAIRGAKLESAFVHIRQQLPELQASDAQLARAILAL
HHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCC
>Mature Secondary Structure 
SRNHLFGAALLLVFTGAANATSFVVTTDAVVGAVAATTDATSDISSSFRDDKIVQAARD
CCCHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHCCCCHHHHHHHHCHHHHHHHHHH
DAASFVGSEGAIRGAKLESAFVHIRQQLPELQASDAQLARAILAL
HHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA