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The map label for this gene is 104779334

Identifier: 104779334

GI number: 104779334

Start: 22181

End: 22489

Strand: Reverse

Name: 104779334

Synonym: PSEEN0021

Alternate gene names: NA

Gene position: 22489-22181 (Counterclockwise)

Preceding gene: 104779335

Following gene: 104779331

Centisome position: 0.38

GC content: 64.08

Gene sequence:

>309_bases
ATGCGTGAATCGCTGGAGAAAATGCTGGCCAAGGGTGTGGATAACCCGCTGCTGCGGTTCGGGCTGGGCAAGGCCTGGCT
GGACGAGGGCAATGGCGCTGAAGCGGCGGTGCACCTGGCGGCTTGTGTGCGGCAGGATCCGAAGTACTCGGCGGCGTGGA
AGCTGCTGGGGAAGGCGTATCAGCTCAGCGGCGATCTGGCTGGCGCGCGCACGGCCTGGGAAGAGGGGATCGTCGCGGCG
CAGGCCCATGGCGACAAGCAGGCCGAGAAAGAGATGACCGTTTTCCTCAAGAAGCTCAACAAGGCTTGA

Upstream 100 bases:

>100_bases
CGGGCGACCATGTGATCCTGTTCGTTGTGGATAAAAAGCAGATTCGAGACGTGGAGAAACTGTTCCACGTGGGCCTGAGT
TTCTTCTAGGGAGAGACGTG

Downstream 100 bases:

>100_bases
GATCGCCGGGGCTGCTATGCAGCCCATCGCGACACAAGGCCGCTCCCACATTGATCGACATATGCAGGGCCTCTGTGGGA
GCGGCCTTGCGTCGCGAAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 102; Mature: 102

Protein sequence:

>102_residues
MRESLEKMLAKGVDNPLLRFGLGKAWLDEGNGAEAAVHLAACVRQDPKYSAAWKLLGKAYQLSGDLAGARTAWEEGIVAA
QAHGDKQAEKEMTVFLKKLNKA

Sequences:

>Translated_102_residues
MRESLEKMLAKGVDNPLLRFGLGKAWLDEGNGAEAAVHLAACVRQDPKYSAAWKLLGKAYQLSGDLAGARTAWEEGIVAA
QAHGDKQAEKEMTVFLKKLNKA
>Mature_102_residues
MRESLEKMLAKGVDNPLLRFGLGKAWLDEGNGAEAAVHLAACVRQDPKYSAAWKLLGKAYQLSGDLAGARTAWEEGIVAA
QAHGDKQAEKEMTVFLKKLNKA

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 TPR repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11054; Mature: 11054

Theoretical pI: Translated: 9.13; Mature: 9.13

Prosite motif: PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRESLEKMLAKGVDNPLLRFGLGKAWLDEGNGAEAAVHLAACVRQDPKYSAAWKLLGKAY
CHHHHHHHHHCCCCCHHHHHHCCHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHH
QLSGDLAGARTAWEEGIVAAQAHGDKQAEKEMTVFLKKLNKA
HHCCCCCCHHHHHHHCCCHHCCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRESLEKMLAKGVDNPLLRFGLGKAWLDEGNGAEAAVHLAACVRQDPKYSAAWKLLGKAY
CHHHHHHHHHCCCCCHHHHHHCCHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHH
QLSGDLAGARTAWEEGIVAAQAHGDKQAEKEMTVFLKKLNKA
HHCCCCCCHHHHHHHCCCHHCCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]