Definition Deinococcus geothermalis DSM 11300, complete genome.
Accession NC_008025
Length 2,467,205

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The map label for this gene is 94986336

Identifier: 94986336

GI number: 94986336

Start: 2357628

End: 2357987

Strand: Reverse

Name: 94986336

Synonym: Dgeo_2237

Alternate gene names: NA

Gene position: 2357987-2357628 (Counterclockwise)

Preceding gene: 94986337

Following gene: 94986335

Centisome position: 95.57

GC content: 64.72

Gene sequence:

>360_bases
GTGTCGGCGGGCGCAGGCCTTGTGCAGCGGGAGGACGGTCCTGTCGAGGCCATTCACCCTGGGGCCCCCGTGTGGTTCGA
GCCCAGCAAGCAGCACTGGGACGACGTGGCCCTGACCTCCGCCAGGACACACATCACCGTTCAGGAATCTCAAGCTGGCA
GGGCCGTAAACTGGCTGGAACACGTCAGTGACAAACAGAACCAGGGCTACTCAGGGGCGCATCTCTCGCGCATCCGCTCA
GGAGACCTACGGCATGACGCCTACGGCCCACACCTCACCACAAGCCAATCCCTTTCCTCTGCCAGGCGAAGCCGACCTTG
CCCGCTTGGCCAGGTTGCTGCGCGCCCACACGCCCTATGA

Upstream 100 bases:

>100_bases
GACGGGTTCACCGGCACCGTCTGCATAGATCCTGATCCGCTCTGCACCGCCCAGGACTCGCACGGCCGGGCACACGCCGC
TTCTCGGCCAGGTCCTCATC

Downstream 100 bases:

>100_bases
CGGCAGTTTTGAGCTGCGTCTACCCGGTGTGCACGCCGTCCGGCGGTCCCGAACGAACACCGAGTTGGTCCACGGGTTCT
ATCATCCCTCGCTGTGCATT

Product: hypothetical protein

Products: NA

Alternate protein names: Cupin 2 Domain-Containing Protein; Cupin 2 Conserved Barrel Domain-Containing Protein; Transcriptional Regulator; Cupin 2 Barrel; Cupin Family Protein; ABC-2 Type Transporter; Cupin Region; Cupin Domain-Containing Protein

Number of amino acids: Translated: 119; Mature: 118

Protein sequence:

>119_residues
MSAGAGLVQREDGPVEAIHPGAPVWFEPSKQHWDDVALTSARTHITVQESQAGRAVNWLEHVSDKQNQGYSGAHLSRIRS
GDLRHDAYGPHLTTSQSLSSARRSRPCPLGQVAARPHAL

Sequences:

>Translated_119_residues
MSAGAGLVQREDGPVEAIHPGAPVWFEPSKQHWDDVALTSARTHITVQESQAGRAVNWLEHVSDKQNQGYSGAHLSRIRS
GDLRHDAYGPHLTTSQSLSSARRSRPCPLGQVAARPHAL
>Mature_118_residues
SAGAGLVQREDGPVEAIHPGAPVWFEPSKQHWDDVALTSARTHITVQESQAGRAVNWLEHVSDKQNQGYSGAHLSRIRSG
DLRHDAYGPHLTTSQSLSSARRSRPCPLGQVAARPHAL

Specific function: Unknown

COG id: COG1917

COG function: function code S; Uncharacterized conserved protein, contains double-stranded beta-helix domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12920; Mature: 12789

Theoretical pI: Translated: 8.56; Mature: 8.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAGAGLVQREDGPVEAIHPGAPVWFEPSKQHWDDVALTSARTHITVQESQAGRAVNWLE
CCCCCCCEECCCCCEEEECCCCCEEECCCCCCCCCEEECCCCEEEEEECCCCCCHHHHHH
HVSDKQNQGYSGAHLSRIRSGDLRHDAYGPHLTTSQSLSSARRSRPCPLGQVAARPHAL
HHHCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SAGAGLVQREDGPVEAIHPGAPVWFEPSKQHWDDVALTSARTHITVQESQAGRAVNWLE
CCCCCCEECCCCCEEEECCCCCEEECCCCCCCCCEEECCCCEEEEEECCCCCCHHHHHH
HVSDKQNQGYSGAHLSRIRSGDLRHDAYGPHLTTSQSLSSARRSRPCPLGQVAARPHAL
HHHCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA