| Definition | Deinococcus geothermalis DSM 11300, complete genome. |
|---|---|
| Accession | NC_008025 |
| Length | 2,467,205 |
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The map label for this gene is 94986332
Identifier: 94986332
GI number: 94986332
Start: 2354095
End: 2354850
Strand: Reverse
Name: 94986332
Synonym: Dgeo_2233
Alternate gene names: NA
Gene position: 2354850-2354095 (Counterclockwise)
Preceding gene: 94986335
Following gene: 94986331
Centisome position: 95.45
GC content: 68.12
Gene sequence:
>756_bases ATGAAGGTGTACGGTCTAAAGGTTGCCGCTCTGGTGCCGCTCCTTGCCGCTGCTGCCCTCGCCGCCCCGACTGGCACGGA TGTGGAGCGGGCCGCGACGCGCACAGCCGAAGTGTTGGGGGGTGTTCTCCGCAACTGTCCAGCAAGTTTTACCAGCATCG GCAGCGCACAGAAAAGGTGTGTAGGCACGAGCAACCCAGTGGAGCAGGCGCGCGTGCAGTTGGGGAAGGCGCTGAGTGCC GATCTGTACGGGGTGTGGCGCAGCCGTGACGGGCAGCGCAGCGTCTACAACTGGCTGCGGACGCCAGGAGGCTACGTGTA TCTCCGCCTGCAACCCGATCCGGAAGGTCGCGCCCAGACCCTGGTCTATCTGGATCTCCCCCCGAGCCGTACCCCCACGA GAACCGCTCCGGACAATGGCGTGTCGCCAACGCGTCCAGCACCTTCCCCAGCACCTTCCCCCCGGCCGCCAGCTGCGCAG TCGCTGGCCCCAGTGCCGTTCACGCGGACCTTGCAGGTCACCACTCCACGGATGAACGGTGCGGACGTCCGGGCGGTTCA GAACCGGCTGATCGCCCTCACGCGCCCCAGCAGCGGCGGGCAGGGGGACGGGTGGTACGGCCCGGTGACAGCCGCCACCG TCCGTGCGTTTCAGGCTGCCAATGCCCTGCCCGTCACGGGCCGTGTGGACCGCGCCACCTGGAATGCACTCTTTGGGGCC GCTGCCCGGCCGTTCTCCGCCGAGCGCATTCGCTGA
Upstream 100 bases:
>100_bases GGGCGTCATGAGAGCGTTAGGGTAGCGCAGCGCCGCTTCCAGTAAGGCCCTGTCAGCGGCGCCTCAGCCTCCGCCCGCCA CCGCGTGCTAGCAAGGTGGC
Downstream 100 bases:
>100_bases TGTCTGTGGTGTGTCAAGAAAAGCTCCCGCAGCGAGGCCCGGGAGCGAGAGACCCGACTTCACCCGGCTGGGTTGCATTG TGGAACCTCTTCAAAGGAGG
Product: peptidoglycan binding domain-containing protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 251; Mature: 251
Protein sequence:
>251_residues MKVYGLKVAALVPLLAAAALAAPTGTDVERAATRTAEVLGGVLRNCPASFTSIGSAQKRCVGTSNPVEQARVQLGKALSA DLYGVWRSRDGQRSVYNWLRTPGGYVYLRLQPDPEGRAQTLVYLDLPPSRTPTRTAPDNGVSPTRPAPSPAPSPRPPAAQ SLAPVPFTRTLQVTTPRMNGADVRAVQNRLIALTRPSSGGQGDGWYGPVTAATVRAFQAANALPVTGRVDRATWNALFGA AARPFSAERIR
Sequences:
>Translated_251_residues MKVYGLKVAALVPLLAAAALAAPTGTDVERAATRTAEVLGGVLRNCPASFTSIGSAQKRCVGTSNPVEQARVQLGKALSA DLYGVWRSRDGQRSVYNWLRTPGGYVYLRLQPDPEGRAQTLVYLDLPPSRTPTRTAPDNGVSPTRPAPSPAPSPRPPAAQ SLAPVPFTRTLQVTTPRMNGADVRAVQNRLIALTRPSSGGQGDGWYGPVTAATVRAFQAANALPVTGRVDRATWNALFGA AARPFSAERIR >Mature_251_residues MKVYGLKVAALVPLLAAAALAAPTGTDVERAATRTAEVLGGVLRNCPASFTSIGSAQKRCVGTSNPVEQARVQLGKALSA DLYGVWRSRDGQRSVYNWLRTPGGYVYLRLQPDPEGRAQTLVYLDLPPSRTPTRTAPDNGVSPTRPAPSPAPSPRPPAAQ SLAPVPFTRTLQVTTPRMNGADVRAVQNRLIALTRPSSGGQGDGWYGPVTAATVRAFQAANALPVTGRVDRATWNALFGA AARPFSAERIR
Specific function: Unknown
COG id: COG3409
COG function: function code M; Putative peptidoglycan-binding domain-containing protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26550; Mature: 26550
Theoretical pI: Translated: 11.58; Mature: 11.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVYGLKVAALVPLLAAAALAAPTGTDVERAATRTAEVLGGVLRNCPASFTSIGSAQKRC CEEEHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH VGTSNPVEQARVQLGKALSADLYGVWRSRDGQRSVYNWLRTPGGYVYLRLQPDPEGRAQT CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCEE LVYLDLPPSRTPTRTAPDNGVSPTRPAPSPAPSPRPPAAQSLAPVPFTRTLQVTTPRMNG EEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCEEEEEECCCCCC ADVRAVQNRLIALTRPSSGGQGDGWYGPVTAATVRAFQAANALPVTGRVDRATWNALFGA HHHHHHHHCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH AARPFSAERIR CCCCCCCCCCC >Mature Secondary Structure MKVYGLKVAALVPLLAAAALAAPTGTDVERAATRTAEVLGGVLRNCPASFTSIGSAQKRC CEEEHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH VGTSNPVEQARVQLGKALSADLYGVWRSRDGQRSVYNWLRTPGGYVYLRLQPDPEGRAQT CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCEE LVYLDLPPSRTPTRTAPDNGVSPTRPAPSPAPSPRPPAAQSLAPVPFTRTLQVTTPRMNG EEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCEEEEEECCCCCC ADVRAVQNRLIALTRPSSGGQGDGWYGPVTAATVRAFQAANALPVTGRVDRATWNALFGA HHHHHHHHCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH AARPFSAERIR CCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA