| Definition | Deinococcus geothermalis DSM 11300, complete genome. |
|---|---|
| Accession | NC_008025 |
| Length | 2,467,205 |
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The map label for this gene is 94986311
Identifier: 94986311
GI number: 94986311
Start: 2332553
End: 2332789
Strand: Reverse
Name: 94986311
Synonym: Dgeo_2212
Alternate gene names: NA
Gene position: 2332789-2332553 (Counterclockwise)
Preceding gene: 94986312
Following gene: 94986310
Centisome position: 94.55
GC content: 63.29
Gene sequence:
>237_bases ATGCCTCATGTCATTACCAGTCCCTGCATCGGTGTGAAGGATCAGGCCTGCACCGAAGTCTGCCCCGTGGAGTGCATCTA CGATGGCGGCGACCAGTTCGTGATTCACCCCGACGAGTGCATCGACTGCGGCGCCTGCGTGCCCGCCTGCCCGGTGAGCG CGATCTTCCCGGAGGAAGACGTCCCCGCGGGCGAGGAAGAGTTCACCCTCAAGAACCGCGCCTTCTTCGGGCTGTAA
Upstream 100 bases:
>100_bases CCTGCACTCGGATTTTTGGCGTCTACGCCGGCAAAATACGGTCTAAGTTTTGAGGGATCTGGCCTTGTCACACCTGGGGG GGGTGTGCATACTGTGCCCC
Downstream 100 bases:
>100_bases CGCCCTTTGCCTGTCCCCGGCCCCGGCTGCCGGGGCGCTCTTTGCTTTGGTCCCTTGCCCCACGCCTGCTTCGCCGCTAG GATGGCGAGGCTGGCGTGCT
Product: 4Fe-4S ferredoxin, iron-sulfur binding
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 78; Mature: 77
Protein sequence:
>78_residues MPHVITSPCIGVKDQACTEVCPVECIYDGGDQFVIHPDECIDCGACVPACPVSAIFPEEDVPAGEEEFTLKNRAFFGL
Sequences:
>Translated_78_residues MPHVITSPCIGVKDQACTEVCPVECIYDGGDQFVIHPDECIDCGACVPACPVSAIFPEEDVPAGEEEFTLKNRAFFGL >Mature_77_residues PHVITSPCIGVKDQACTEVCPVECIYDGGDQFVIHPDECIDCGACVPACPVSAIFPEEDVPAGEEEFTLKNRAFFGL
Specific function: Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions [H]
COG id: COG1146
COG function: function code C; Ferredoxin
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001450 - InterPro: IPR017896 - InterPro: IPR017900 - InterPro: IPR000813 [H]
Pfam domain/function: PF00037 Fer4 [H]
EC number: NA
Molecular weight: Translated: 8376; Mature: 8244
Theoretical pI: Translated: 3.81; Mature: 3.81
Prosite motif: PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
10.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 11.5 %Cys+Met (Translated Protein) 10.4 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 10.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPHVITSPCIGVKDQACTEVCPVECIYDGGDQFVIHPDECIDCGACVPACPVSAIFPEED CCCCCCCCCCCCCCCCCCCCCCEEEEEECCCEEEECCHHHCCCCCCCCCCCCCCCCCCCC VPAGEEEFTLKNRAFFGL CCCCCCCEEECCEEECCC >Mature Secondary Structure PHVITSPCIGVKDQACTEVCPVECIYDGGDQFVIHPDECIDCGACVPACPVSAIFPEED CCCCCCCCCCCCCCCCCCCCCEEEEEECCCEEEECCHHHCCCCCCCCCCCCCCCCCCCC VPAGEEEFTLKNRAFFGL CCCCCCCEEECCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7225412; 11681700; 6313685 [H]