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The map label for this gene is ytcJ [H]

Identifier: 94986297

GI number: 94986297

Start: 2317532

End: 2319037

Strand: Reverse

Name: ytcJ [H]

Synonym: Dgeo_2198

Alternate gene names: 94986297

Gene position: 2319037-2317532 (Counterclockwise)

Preceding gene: 94986301

Following gene: 94986296

Centisome position: 93.99

GC content: 69.79

Gene sequence:

>1506_bases
ATGACCGCATCCGCAGCTCTGACTGTGATTCAGGCATCTACGCTCACACTTGACGACACGCAGCCCCGGGTAGAGGCGGT
CCTCGTCGGTGGGGGACGGGTGCTGGCGCGGGGATCGCGAGAGGAGGTGGCGGCCCTCGCTCCCCGCGCCCGCGTGCTGG
ATCACCGCGACCTGATTCTGACCCCCGGGCTGGCCGAGGCACACATTCACCTGGTCGCCTACGGCTTTTCGCTCTCGCAG
CTCAACCTGCATGGAGCGCGCAGCGTGACCGAGGTGCAGGCCAAGGTGGCGCAGCGCGCCCTGCAGACGCCCCCCGGCAC
CTGGATTCGGGGGGGCGGCTTTTTGCTCAGCGAACTGGGGTTGGGCGGCTATCCCAGCGCGGCCCTGCTGGACGAGGTGA
GCCCCCACCATCCGGTTCTGCTGTACTCTCGCGACCTGCACCTGAGCTGGGCCAACTCGCTGGCACTGCGTCTGGCCGGG
ATCACAGAGGCCACGGCCGACCCACAGGGCGGGAAGATTGTGCATCCCCTCGGCACCCTGCTCGAAGGCGCCAGCGAGCT
GGTCACACGCGTGATGCCTGTGCCTGGCGAGGCCGAATACCTGGCGGCGGCGCAGGCTGGGGCAGATGATCTTGCCGCGC
GGGGCTACGTCAGTGCACACACGATGGCCTTTGAGGCCCCAGAGGCGCCGCGGGCCCTCCAGACACTGGCTGCCCGCGGA
GAACTGCCGCTGAGGATCTGGGCCTGCTTGCCGCACGAGCGCCTGGCGCACGCCCGCGAGCTGGGCCTGGCCCTCAATCC
AGGTGGTCTCTTCCAGTGGGGCGGTGTCAAGTTCTTTGCGGACGGGGCGCTGGGGAGCCGTACCGCCTGGCTGCACGCGC
CGGGCTTTGCGGACGGCTCCGGCACGGGGATGCCCCTCGATCCCCCGGACCTGATCCGCGAACGGGGCGCCGAGGTGCTG
CGCCTGGGTCTGACCCCCGTCACCCATGCCATCGGAGACCGTGCAAACCATGAGGTGCTGAACGCCTATGACGCCCTGCG
TCCCCTCGCCGCCGAGAGAGGCGTACGGCTGCGGATCGAACACGCCCAGCACCTTGATCCCAAAGATCTTCCCCGTTTCC
AGGGCCTCACGGTGAGCGTGCAGCCAATCCACCTGCAGGCCGACGGGGCGATGATCCGTGAGCTGCTGCCGCATCTCGCG
AAGACCAGCTACGCTTTCCGTTCGCTCAAGGCCGCCGGGGCGATCCTGGCGTTTGGTTCGGACGCTCCGGTGGCGCCGCC
CGAGTACCGCGCCACCTTTGCCGCTGCCCTGACCCGCCGCGATGACGAGGGGCAGCCTCTCGCGCCCGGCGAGGCCCTGA
CAGAGGAGGAGATTCTCTGGGCCCATACCCGCGGCCCTGCCCTGGCGGCGGGCTGGGCGGACGAGGGCATCATCCGCCCA
GGGGCGCGAGCCGCCTTCACCCTCTGGGACCGCATCGGGGGGCACGCGCAGGCGCTGGTGTTGTAG

Upstream 100 bases:

>100_bases
CGAGGATGCGTGGCATGAGGAGAGCTTAGCAATGCTGTGAGAAAAGACGGTACAAAATTTCACGCGTTCTTCAGCAAGGA
TAAGTGATTAAGCTGGAGGG

Downstream 100 bases:

>100_bases
GGCGACCAAGCAGCGCGCCGAGGGGGCAACTGGGGCACCTGTCCCTCAGCGCGTTTCGGTTCTGTCTGCCTGTTCCGGGA
ATGAAGCGTTTTCCAGGCGA

Product: amidohydrolase 3

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 501; Mature: 500

Protein sequence:

>501_residues
MTASAALTVIQASTLTLDDTQPRVEAVLVGGGRVLARGSREEVAALAPRARVLDHRDLILTPGLAEAHIHLVAYGFSLSQ
LNLHGARSVTEVQAKVAQRALQTPPGTWIRGGGFLLSELGLGGYPSAALLDEVSPHHPVLLYSRDLHLSWANSLALRLAG
ITEATADPQGGKIVHPLGTLLEGASELVTRVMPVPGEAEYLAAAQAGADDLAARGYVSAHTMAFEAPEAPRALQTLAARG
ELPLRIWACLPHERLAHARELGLALNPGGLFQWGGVKFFADGALGSRTAWLHAPGFADGSGTGMPLDPPDLIRERGAEVL
RLGLTPVTHAIGDRANHEVLNAYDALRPLAAERGVRLRIEHAQHLDPKDLPRFQGLTVSVQPIHLQADGAMIRELLPHLA
KTSYAFRSLKAAGAILAFGSDAPVAPPEYRATFAAALTRRDDEGQPLAPGEALTEEEILWAHTRGPALAAGWADEGIIRP
GARAAFTLWDRIGGHAQALVL

Sequences:

>Translated_501_residues
MTASAALTVIQASTLTLDDTQPRVEAVLVGGGRVLARGSREEVAALAPRARVLDHRDLILTPGLAEAHIHLVAYGFSLSQ
LNLHGARSVTEVQAKVAQRALQTPPGTWIRGGGFLLSELGLGGYPSAALLDEVSPHHPVLLYSRDLHLSWANSLALRLAG
ITEATADPQGGKIVHPLGTLLEGASELVTRVMPVPGEAEYLAAAQAGADDLAARGYVSAHTMAFEAPEAPRALQTLAARG
ELPLRIWACLPHERLAHARELGLALNPGGLFQWGGVKFFADGALGSRTAWLHAPGFADGSGTGMPLDPPDLIRERGAEVL
RLGLTPVTHAIGDRANHEVLNAYDALRPLAAERGVRLRIEHAQHLDPKDLPRFQGLTVSVQPIHLQADGAMIRELLPHLA
KTSYAFRSLKAAGAILAFGSDAPVAPPEYRATFAAALTRRDDEGQPLAPGEALTEEEILWAHTRGPALAAGWADEGIIRP
GARAAFTLWDRIGGHAQALVL
>Mature_500_residues
TASAALTVIQASTLTLDDTQPRVEAVLVGGGRVLARGSREEVAALAPRARVLDHRDLILTPGLAEAHIHLVAYGFSLSQL
NLHGARSVTEVQAKVAQRALQTPPGTWIRGGGFLLSELGLGGYPSAALLDEVSPHHPVLLYSRDLHLSWANSLALRLAGI
TEATADPQGGKIVHPLGTLLEGASELVTRVMPVPGEAEYLAAAQAGADDLAARGYVSAHTMAFEAPEAPRALQTLAARGE
LPLRIWACLPHERLAHARELGLALNPGGLFQWGGVKFFADGALGSRTAWLHAPGFADGSGTGMPLDPPDLIRERGAEVLR
LGLTPVTHAIGDRANHEVLNAYDALRPLAAERGVRLRIEHAQHLDPKDLPRFQGLTVSVQPIHLQADGAMIRELLPHLAK
TSYAFRSLKAAGAILAFGSDAPVAPPEYRATFAAALTRRDDEGQPLAPGEALTEEEILWAHTRGPALAAGWADEGIIRPG
ARAAFTLWDRIGGHAQALVL

Specific function: Unknown

COG id: COG1574

COG function: function code R; Predicted metal-dependent hydrolase with the TIM-barrel fold

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013108
- InterPro:   IPR011059 [H]

Pfam domain/function: PF07969 Amidohydro_3 [H]

EC number: NA

Molecular weight: Translated: 53099; Mature: 52968

Theoretical pI: Translated: 6.60; Mature: 6.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTASAALTVIQASTLTLDDTQPRVEAVLVGGGRVLARGSREEVAALAPRARVLDHRDLIL
CCCCCEEEEEEEEEEEECCCCCCEEEEEEECCEEEECCCHHHHHHHCCHHHHCCCCCEEE
TPGLAEAHIHLVAYGFSLSQLNLHGARSVTEVQAKVAQRALQTPPGTWIRGGGFLLSELG
ECCCCHHEEEEEEECCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCEEECCCHHHHHCC
LGGYPSAALLDEVSPHHPVLLYSRDLHLSWANSLALRLAGITEATADPQGGKIVHPLGTL
CCCCCCHHHHHCCCCCCCEEEEECCEEEEHHHCEEEEEECCCCCCCCCCCCEEECHHHHH
LEGASELVTRVMPVPGEAEYLAAAQAGADDLAARGYVSAHTMAFEAPEAPRALQTLAARG
HHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHCCCEEEEEEEECCCCCHHHHHHHHHCC
ELPLRIWACLPHERLAHARELGLALNPGGLFQWGGVKFFADGALGSRTAWLHAPGFADGS
CCCEEEEEECCHHHHHHHHHCCCEECCCCEEEECCEEEEECCCCCCCEEEEECCCCCCCC
GTGMPLDPPDLIRERGAEVLRLGLTPVTHAIGDRANHEVLNAYDALRPLAAERGVRLRIE
CCCCCCCCHHHHHHCCCCEEEECCCHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCEEEEC
HAQHLDPKDLPRFQGLTVSVQPIHLQADGAMIRELLPHLAKTSYAFRSLKAAGAILAFGS
CCCCCCHHCCCCCCCCEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECC
DAPVAPPEYRATFAAALTRRDDEGQPLAPGEALTEEEILWAHTRGPALAAGWADEGIIRP
CCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEECCCCCCCCCC
GARAAFTLWDRIGGHAQALVL
CCHHHHHHHHHCCCCEEEEEC
>Mature Secondary Structure 
TASAALTVIQASTLTLDDTQPRVEAVLVGGGRVLARGSREEVAALAPRARVLDHRDLIL
CCCCEEEEEEEEEEEECCCCCCEEEEEEECCEEEECCCHHHHHHHCCHHHHCCCCCEEE
TPGLAEAHIHLVAYGFSLSQLNLHGARSVTEVQAKVAQRALQTPPGTWIRGGGFLLSELG
ECCCCHHEEEEEEECCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCEEECCCHHHHHCC
LGGYPSAALLDEVSPHHPVLLYSRDLHLSWANSLALRLAGITEATADPQGGKIVHPLGTL
CCCCCCHHHHHCCCCCCCEEEEECCEEEEHHHCEEEEEECCCCCCCCCCCCEEECHHHHH
LEGASELVTRVMPVPGEAEYLAAAQAGADDLAARGYVSAHTMAFEAPEAPRALQTLAARG
HHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHCCCEEEEEEEECCCCCHHHHHHHHHCC
ELPLRIWACLPHERLAHARELGLALNPGGLFQWGGVKFFADGALGSRTAWLHAPGFADGS
CCCEEEEEECCHHHHHHHHHCCCEECCCCEEEECCEEEEECCCCCCCEEEEECCCCCCCC
GTGMPLDPPDLIRERGAEVLRLGLTPVTHAIGDRANHEVLNAYDALRPLAAERGVRLRIE
CCCCCCCCHHHHHHCCCCEEEECCCHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCEEEEC
HAQHLDPKDLPRFQGLTVSVQPIHLQADGAMIRELLPHLAKTSYAFRSLKAAGAILAFGS
CCCCCCHHCCCCCCCCEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECC
DAPVAPPEYRATFAAALTRRDDEGQPLAPGEALTEEEILWAHTRGPALAAGWADEGIIRP
CCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEECCCCCCCCCC
GARAAFTLWDRIGGHAQALVL
CCHHHHHHHHHCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]