| Definition | Deinococcus geothermalis DSM 11300, complete genome. |
|---|---|
| Accession | NC_008025 |
| Length | 2,467,205 |
Click here to switch to the map view.
The map label for this gene is 94986283
Identifier: 94986283
GI number: 94986283
Start: 2304045
End: 2304494
Strand: Reverse
Name: 94986283
Synonym: Dgeo_2184
Alternate gene names: NA
Gene position: 2304494-2304045 (Counterclockwise)
Preceding gene: 94986286
Following gene: 94986281
Centisome position: 93.41
GC content: 69.56
Gene sequence:
>450_bases ATGCTCCAGCCGCTGACCCGCGTTTTTGTCTACGGCACCCTGATGCCCGGTGAGCGCAATGCAGGGGTGGCCGCTCAGGG TGGCCCCTTCCAGGCGCAACCGGCCCGCCTGGCGGGCTTCCGGCTGCTGCACCTCAGGCCAGAAGGGTATCCGGGGATTT TGCCCGGCGCGGCGGACGAGGCGGTGCAGGGGTATGTCCTTACGTATGCAGCAAGCGACTGGGAGCGGGCCCTTTCCTTC CTCGACGCCCTGGAGGGTGTCCACGAGACGCCGCCGCTCTACACCCGCGAGCGCGTGACGGTCACGCTGGAAAACGGAGA GAGTGTCCCCGCCTGGGTGTATGTGTACGCCCACCGCGCCCGCCTGACCCAGCCCGGCGTTCTTGCGGTGCCCGGCAACG ACTGGCGCCGTGTTCCCGACCGCAGGCGCCCCCGCCCCGGTGAACGCTAA
Upstream 100 bases:
>100_bases GTGTGTGCGGTGTCTCTCGTTCCCTGCGGGCGCTCCTGGGCGCTGAGCGGCTTCCCCCTCTGAGCCTCTTTCCTGAAGGG AAGGCGCTAGGCTGGGCGCT
Downstream 100 bases:
>100_bases TTCAGCATCCGCCCGCTTTTCTCGCCCATCAGCGCCTCGGCCTTTTTCAGATGGTCTTGCAGGGTGCCGTACCAGTCGTC ACTCTCGGGGGTGTATTCCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 149; Mature: 149
Protein sequence:
>149_residues MLQPLTRVFVYGTLMPGERNAGVAAQGGPFQAQPARLAGFRLLHLRPEGYPGILPGAADEAVQGYVLTYAASDWERALSF LDALEGVHETPPLYTRERVTVTLENGESVPAWVYVYAHRARLTQPGVLAVPGNDWRRVPDRRRPRPGER
Sequences:
>Translated_149_residues MLQPLTRVFVYGTLMPGERNAGVAAQGGPFQAQPARLAGFRLLHLRPEGYPGILPGAADEAVQGYVLTYAASDWERALSF LDALEGVHETPPLYTRERVTVTLENGESVPAWVYVYAHRARLTQPGVLAVPGNDWRRVPDRRRPRPGER >Mature_149_residues MLQPLTRVFVYGTLMPGERNAGVAAQGGPFQAQPARLAGFRLLHLRPEGYPGILPGAADEAVQGYVLTYAASDWERALSF LDALEGVHETPPLYTRERVTVTLENGESVPAWVYVYAHRARLTQPGVLAVPGNDWRRVPDRRRPRPGER
Specific function: Unknown
COG id: COG2105
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16517; Mature: 16517
Theoretical pI: Translated: 9.38; Mature: 9.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLQPLTRVFVYGTLMPGERNAGVAAQGGPFQAQPARLAGFRLLHLRPEGYPGILPGAADE CCCHHEEEEEEEEECCCCCCCCEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCH AVQGYVLTYAASDWERALSFLDALEGVHETPPLYTRERVTVTLENGESVPAWVYVYAHRA HCCCEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCEEEEEEEECC RLTQPGVLAVPGNDWRRVPDRRRPRPGER CCCCCCEEEECCCCHHCCCCCCCCCCCCC >Mature Secondary Structure MLQPLTRVFVYGTLMPGERNAGVAAQGGPFQAQPARLAGFRLLHLRPEGYPGILPGAADE CCCHHEEEEEEEEECCCCCCCCEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCH AVQGYVLTYAASDWERALSFLDALEGVHETPPLYTRERVTVTLENGESVPAWVYVYAHRA HCCCEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCEEEEEEEECC RLTQPGVLAVPGNDWRRVPDRRRPRPGER CCCCCCEEEECCCCHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA