| Definition | Deinococcus geothermalis DSM 11300, complete genome. |
|---|---|
| Accession | NC_008025 |
| Length | 2,467,205 |
Click here to switch to the map view.
The map label for this gene is 94986207
Identifier: 94986207
GI number: 94986207
Start: 2218386
End: 2219477
Strand: Reverse
Name: 94986207
Synonym: Dgeo_2108
Alternate gene names: NA
Gene position: 2219477-2218386 (Counterclockwise)
Preceding gene: 94986208
Following gene: 94986206
Centisome position: 89.96
GC content: 62.09
Gene sequence:
>1092_bases ATGTCGAATTCGCAGATTCTGGGGGAGCGCGCCCGTATTCTGGCAGATCAGCTCCTCGCTGTGCCCACCACCGTCTATCA GCAGCGCAGCTTGCAAGCTGCGCTGCACCTGTTCCTCGATACGGGGACCAAAACCGCCCTGCACCGTGCGCCGCTGGTCA GCAAGAGTGCGGTGAGCCGCTTGTTGAACAATTATGACTGGGATACAGCGGCCTGCTGGGCGTTGCTCCAGCGCAGCCAG TGGGAGGCCCTGCTGCTCGCCGCACGACGCAAGCGTCGTGCCTGCCTCCGGTTGAGCGTGGACCTGACCAGCATCGAGAA GACGGGCAAGCAATTGCCCTTCGTCCGCGTCTACAACGAAGTCCACGGCATTCATCTGGTCGTGCTGTTTGCCGAATACC GGGGGCTGAAATTCCCGGTGGGGTATCGGGTCTACCGGGGAAAGGGCACAGCAACCCCCGTGTCGCTCGCCCTGGAATTG CTGGGGGAGGTGCCCGACGCCATTCGGAAGCGCTTTCGAATCCGTGTGCTGGCGGACAGCGGCTTTGAAGCCGCTGTCTT CCTGGATGGGGTTCGTACCCTGGGCTTCGAGTTCGTCGTCGGCGTCCGAGCGACTCGGCGTACCACCCATCCCGGTCAAG TGACGGTGGCGGACTGCGAACATGGGGCCTGGCTGGAATTGCAGAACTGGCCGCATGACACCCTGACCCTCGCCCGAGTT GAGCGGGGAGAGCGGACCTTTTTCTCGGTCGCCTCAGAGTTGATGACGGGAGACGAAGTGGCCGCCGAGGGGGGCAAGCG GTGGAACATCGAGTCCTTTTTCAAGGAGGGCAAGCACCAGTTTAGTCTCCAGCAGTTCGCCTTGCGAACTGCCCGCGGCT TAGACCGCTGGGTGCTGCTGGTGTTTCTCGCCTTCACCTTAACGATGCTGCACCGCTCGCCTGACCTCTCGCTTGAAGAG GCCGCAGGGCTGGCCTTGACCCTGGCCCTCCCTTTCCTCCGCTTGAACGTCATCTTCGCCCGCCTCGCCACAGACGAGGA ATTTCTGCGCCAGCACGGCTATTCACTCAAAATTGCAAGGTGCAACTCCTGA
Upstream 100 bases:
>100_bases AATCCGGGTGATGATGCAGCCAATGGCGAGAGTTGGGTATTCTCAGGAGTTGCACCTGAATAGGTAGCGAAGAAGCGCTC CCAGACGCGAGAATCTGGGG
Downstream 100 bases:
>100_bases GGTATTGGTTGAGTATCGCGATTATTACTACGAGCAAAGCCCCGTCGGCTCGACGCCGACGCTCCCGCCAACGGCTGGCA GTGACGCCAATCTCCTCTCT
Product: transposase, IS4
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 363; Mature: 362
Protein sequence:
>363_residues MSNSQILGERARILADQLLAVPTTVYQQRSLQAALHLFLDTGTKTALHRAPLVSKSAVSRLLNNYDWDTAACWALLQRSQ WEALLLAARRKRRACLRLSVDLTSIEKTGKQLPFVRVYNEVHGIHLVVLFAEYRGLKFPVGYRVYRGKGTATPVSLALEL LGEVPDAIRKRFRIRVLADSGFEAAVFLDGVRTLGFEFVVGVRATRRTTHPGQVTVADCEHGAWLELQNWPHDTLTLARV ERGERTFFSVASELMTGDEVAAEGGKRWNIESFFKEGKHQFSLQQFALRTARGLDRWVLLVFLAFTLTMLHRSPDLSLEE AAGLALTLALPFLRLNVIFARLATDEEFLRQHGYSLKIARCNS
Sequences:
>Translated_363_residues MSNSQILGERARILADQLLAVPTTVYQQRSLQAALHLFLDTGTKTALHRAPLVSKSAVSRLLNNYDWDTAACWALLQRSQ WEALLLAARRKRRACLRLSVDLTSIEKTGKQLPFVRVYNEVHGIHLVVLFAEYRGLKFPVGYRVYRGKGTATPVSLALEL LGEVPDAIRKRFRIRVLADSGFEAAVFLDGVRTLGFEFVVGVRATRRTTHPGQVTVADCEHGAWLELQNWPHDTLTLARV ERGERTFFSVASELMTGDEVAAEGGKRWNIESFFKEGKHQFSLQQFALRTARGLDRWVLLVFLAFTLTMLHRSPDLSLEE AAGLALTLALPFLRLNVIFARLATDEEFLRQHGYSLKIARCNS >Mature_362_residues SNSQILGERARILADQLLAVPTTVYQQRSLQAALHLFLDTGTKTALHRAPLVSKSAVSRLLNNYDWDTAACWALLQRSQW EALLLAARRKRRACLRLSVDLTSIEKTGKQLPFVRVYNEVHGIHLVVLFAEYRGLKFPVGYRVYRGKGTATPVSLALELL GEVPDAIRKRFRIRVLADSGFEAAVFLDGVRTLGFEFVVGVRATRRTTHPGQVTVADCEHGAWLELQNWPHDTLTLARVE RGERTFFSVASELMTGDEVAAEGGKRWNIESFFKEGKHQFSLQQFALRTARGLDRWVLLVFLAFTLTMLHRSPDLSLEEA AGLALTLALPFLRLNVIFARLATDEEFLRQHGYSLKIARCNS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40903; Mature: 40772
Theoretical pI: Translated: 10.16; Mature: 10.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNSQILGERARILADQLLAVPTTVYQQRSLQAALHLFLDTGTKTALHRAPLVSKSAVSR CCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHH LLNNYDWDTAACWALLQRSQWEALLLAARRKRRACLRLSVDLTSIEKTGKQLPFVRVYNE HHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHEEEEEEHHHHHHCCCCCCHHHHHHH VHGIHLVVLFAEYRGLKFPVGYRVYRGKGTATPVSLALELLGEVPDAIRKRFRIRVLADS HCCEEEEEEEEHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCHHHHHHHEEEEEEECC GFEAAVFLDGVRTLGFEFVVGVRATRRTTHPGQVTVADCEHGAWLELQNWPHDTLTLARV CCCEEHHHHHHHHHHHHHHEECHHHCCCCCCCEEEEEECCCCCEEEECCCCCHHHHHHHH ERGERTFFSVASELMTGDEVAAEGGKRWNIESFFKEGKHQFSLQQFALRTARGLDRWVLL HCCCHHHHHHHHHHHCCCHHHHCCCCCCCHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHH VFLAFTLTMLHRSPDLSLEEAAGLALTLALPFLRLNVIFARLATDEEFLRQHGYSLKIAR HHHHHHHHHHHCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCEEEEEE CNS CCC >Mature Secondary Structure SNSQILGERARILADQLLAVPTTVYQQRSLQAALHLFLDTGTKTALHRAPLVSKSAVSR CCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHH LLNNYDWDTAACWALLQRSQWEALLLAARRKRRACLRLSVDLTSIEKTGKQLPFVRVYNE HHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHEEEEEEHHHHHHCCCCCCHHHHHHH VHGIHLVVLFAEYRGLKFPVGYRVYRGKGTATPVSLALELLGEVPDAIRKRFRIRVLADS HCCEEEEEEEEHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCHHHHHHHEEEEEEECC GFEAAVFLDGVRTLGFEFVVGVRATRRTTHPGQVTVADCEHGAWLELQNWPHDTLTLARV CCCEEHHHHHHHHHHHHHHEECHHHCCCCCCCEEEEEECCCCCEEEECCCCCHHHHHHHH ERGERTFFSVASELMTGDEVAAEGGKRWNIESFFKEGKHQFSLQQFALRTARGLDRWVLL HCCCHHHHHHHHHHHCCCHHHHCCCCCCCHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHH VFLAFTLTMLHRSPDLSLEEAAGLALTLALPFLRLNVIFARLATDEEFLRQHGYSLKIAR HHHHHHHHHHHCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCEEEEEE CNS CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA