| Definition | Deinococcus geothermalis DSM 11300, complete genome. |
|---|---|
| Accession | NC_008025 |
| Length | 2,467,205 |
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The map label for this gene is 94986205
Identifier: 94986205
GI number: 94986205
Start: 2216320
End: 2218014
Strand: Reverse
Name: 94986205
Synonym: Dgeo_2106
Alternate gene names: NA
Gene position: 2218014-2216320 (Counterclockwise)
Preceding gene: 94986206
Following gene: 94986204
Centisome position: 89.9
GC content: 66.67
Gene sequence:
>1695_bases ATGCTCGTCTCCCACCGAGTTCAGGATCTCCTCTCGCGGGAGCGCGTGCTCCTTGCGGATCTCCAAGCCTTTCTGGAAAC GCAGGGAGCACCGCCTGAGGCCATCGAGCACGCTCGGCAGGCGGTCCGGTCGCTGGACGAGAGCTTCCTGCTGGTGGTGG TGGGTGAGTTCAACGCGGGCAAAAGCAGCTTCGTGAACGCGCTGTTAGGGGCTGCGGTCTTGCCGGAAGGGGTGACGCCC ACCACCGACCGCATCTATGTCCTCTTGCACGGCGACAAGCCCGGCCAGCTGGAACCCACCCGCGACCCCTTCGTGAGCCG CTTGACCTACCCCTTGCCCAGTTTGGAAGGGGTCGCCCTGGTGGATACGCCCGGCACGAACGCCATCATCCGCCAGCACC AGGCCTTGACGGAGGGCTTCTTGCCGCGGGCCGATCTGCTGCTGTTCCTGACCTCGGCGGATCGGCCTTTTACCGAGTCC GAGCGGCAGTTTCTCGCGTTGGCTGCTCGCTGGGGCCGTAGTGTGATCATGGTCGTCAACAAGGCCGACCTGCTGGAAAC GCCCGAGCAGCGCGAGCAGGTGCGCGAGTTTGTGGAAAAGGGAGCGCGAGGTGTGCTGGGTCTGACCCCACCGGTCTTTC TGCTCAGTGCGCGGGGGGAGCAGCGGGGTGGAGACCCTGGTTTCGCGGCTCTGCGGGATGCCCTGCGCACGCGGCTTTCG GAGACAGAACGCACCCGCCTGAAACTGACCTCGCCGCTGGGGACTGCGGCCGAGATTTTGGGCGGCGAGGAGACCCGCGC GGAGGCGGCCCGCCAAACGCTGACCGAGGACCTGGCGATCCTGCGTGACCTGGAGGCGCAGCGGGCACGCCACCGCGAAA CCATGCTGGGTGAACTCGACGGGCAGCTCAACCGCCTTGGTCGTCTGCTCAGTGAGTTTGAGGTCCGTGCTGACCGGTTT ATCGACAGCACGCTGCGCTTTGGTAATCTGCGCGGCCTGCTGAACAGCCGCGACTTGGAAGAAAAGTTCCGGCGTGAGGC GGTCGCAGACCTGCCCGAAGCGATTGATCGGCAGTTTGGCAGCATGATCGACCGTTTTGTGGAGGCCAACCTGCACTTTT GGGAGGACGTGCAGGCCTTTCTGATTCGCCGTCAGCCACAGGGCGAGGTGGCGCGGACCCGCTTTTCCTACGACCGAGAA GCGCTGCTGGCGGGCATTGCGGGAAGCGCTCGCCAGCACCTGGAGACCACCACCGAGCACGAACTCGCTCGCCAGCTCTC CCGCGACGCCGAGGACGCCCTCAAGGGAGCGGTGGGCGGTCTGGCTGGGGGCCTGGGCATCGGCGCGGGCATCGGCGTGT TGGTCGGCGCTTCGGCGGTGGACTTTACCGGTGGGATTCTGGCGGGCCTCACGCTGGGCAGCCTGGGCCTGTTCGTGCTG CCCAACAAGCGGCTCCAGGCGCACCGGCAACTGCGCCAGAAGATCGCCGATCTGCGGGAAGCCCTCGAACGCATCGTGCG CCGGGAGTACGAACGCGAGCAGGAACGCGCCGATGCCCGCTTGCGCGACGCGATCAGCCCCTATACCCGTTTTACCGAGC AGGAACGGGTCCGGCTGGAGGCGGCGCAGAAGCGGGCCGCCGAACTCCGTGCCCGCCTGGACCGCTTGCAGGCCGAGGTC AAGGCCCTGGCCTGA
Upstream 100 bases:
>100_bases ACGGTCTACCCGCTGAACCTGGGCCGGGTTGCAGTGCCCTAACCCCTCTATCCATTCAAATCTCAAAAAGGAGCGGGCGT GGAGGCTCTACACTGCCTCT
Downstream 100 bases:
>100_bases GGCCCCGCCCCCGGTTTGACAAGCGCGGGCGCATCGTCTACCCTTGTCCGTGCAGTCTTTTCGCCTGTCCGGTGGAGGCT GCCGCACGAGCCCGCCAGTG
Product: dynamin
Products: NA
Alternate protein names: GTPase; Dynamin; GTPase Dynamin-Related; GTPases
Number of amino acids: Translated: 564; Mature: 564
Protein sequence:
>564_residues MLVSHRVQDLLSRERVLLADLQAFLETQGAPPEAIEHARQAVRSLDESFLLVVVGEFNAGKSSFVNALLGAAVLPEGVTP TTDRIYVLLHGDKPGQLEPTRDPFVSRLTYPLPSLEGVALVDTPGTNAIIRQHQALTEGFLPRADLLLFLTSADRPFTES ERQFLALAARWGRSVIMVVNKADLLETPEQREQVREFVEKGARGVLGLTPPVFLLSARGEQRGGDPGFAALRDALRTRLS ETERTRLKLTSPLGTAAEILGGEETRAEAARQTLTEDLAILRDLEAQRARHRETMLGELDGQLNRLGRLLSEFEVRADRF IDSTLRFGNLRGLLNSRDLEEKFRREAVADLPEAIDRQFGSMIDRFVEANLHFWEDVQAFLIRRQPQGEVARTRFSYDRE ALLAGIAGSARQHLETTTEHELARQLSRDAEDALKGAVGGLAGGLGIGAGIGVLVGASAVDFTGGILAGLTLGSLGLFVL PNKRLQAHRQLRQKIADLREALERIVRREYEREQERADARLRDAISPYTRFTEQERVRLEAAQKRAAELRARLDRLQAEV KALA
Sequences:
>Translated_564_residues MLVSHRVQDLLSRERVLLADLQAFLETQGAPPEAIEHARQAVRSLDESFLLVVVGEFNAGKSSFVNALLGAAVLPEGVTP TTDRIYVLLHGDKPGQLEPTRDPFVSRLTYPLPSLEGVALVDTPGTNAIIRQHQALTEGFLPRADLLLFLTSADRPFTES ERQFLALAARWGRSVIMVVNKADLLETPEQREQVREFVEKGARGVLGLTPPVFLLSARGEQRGGDPGFAALRDALRTRLS ETERTRLKLTSPLGTAAEILGGEETRAEAARQTLTEDLAILRDLEAQRARHRETMLGELDGQLNRLGRLLSEFEVRADRF IDSTLRFGNLRGLLNSRDLEEKFRREAVADLPEAIDRQFGSMIDRFVEANLHFWEDVQAFLIRRQPQGEVARTRFSYDRE ALLAGIAGSARQHLETTTEHELARQLSRDAEDALKGAVGGLAGGLGIGAGIGVLVGASAVDFTGGILAGLTLGSLGLFVL PNKRLQAHRQLRQKIADLREALERIVRREYEREQERADARLRDAISPYTRFTEQERVRLEAAQKRAAELRARLDRLQAEV KALA >Mature_564_residues MLVSHRVQDLLSRERVLLADLQAFLETQGAPPEAIEHARQAVRSLDESFLLVVVGEFNAGKSSFVNALLGAAVLPEGVTP TTDRIYVLLHGDKPGQLEPTRDPFVSRLTYPLPSLEGVALVDTPGTNAIIRQHQALTEGFLPRADLLLFLTSADRPFTES ERQFLALAARWGRSVIMVVNKADLLETPEQREQVREFVEKGARGVLGLTPPVFLLSARGEQRGGDPGFAALRDALRTRLS ETERTRLKLTSPLGTAAEILGGEETRAEAARQTLTEDLAILRDLEAQRARHRETMLGELDGQLNRLGRLLSEFEVRADRF IDSTLRFGNLRGLLNSRDLEEKFRREAVADLPEAIDRQFGSMIDRFVEANLHFWEDVQAFLIRRQPQGEVARTRFSYDRE ALLAGIAGSARQHLETTTEHELARQLSRDAEDALKGAVGGLAGGLGIGAGIGVLVGASAVDFTGGILAGLTLGSLGLFVL PNKRLQAHRQLRQKIADLREALERIVRREYEREQERADARLRDAISPYTRFTEQERVRLEAAQKRAAELRARLDRLQAEV KALA
Specific function: Unknown
COG id: COG0699
COG function: function code R; Predicted GTPases (dynamin-related)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 62590; Mature: 62590
Theoretical pI: Translated: 6.46; Mature: 6.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVSHRVQDLLSRERVLLADLQAFLETQGAPPEAIEHARQAVRSLDESFLLVVVGEFNAG CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCC KSSFVNALLGAAVLPEGVTPTTDRIYVLLHGDKPGQLEPTRDPFVSRLTYPLPSLEGVAL HHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHCCCCCCCCCEEE VDTPGTNAIIRQHQALTEGFLPRADLLLFLTSADRPFTESERQFLALAARWGRSVIMVVN EECCCCHHHHHHHHHHHHCCCCHHHHHEEEECCCCCCCHHHHHHHHHHHHHCCEEEEEEE KADLLETPEQREQVREFVEKGARGVLGLTPPVFLLSARGEQRGGDPGFAALRDALRTRLS CHHHHCCCHHHHHHHHHHHHCCCCCCCCCCHHHHEECCCCCCCCCCCHHHHHHHHHHHHH ETERTRLKLTSPLGTAAEILGGEETRAEAARQTLTEDLAILRDLEAQRARHRETMLGELD HHHHHHEEECCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GQLNRLGRLLSEFEVRADRFIDSTLRFGNLRGLLNSRDLEEKFRREAVADLPEAIDRQFG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH SMIDRFVEANLHFWEDVQAFLIRRQPQGEVARTRFSYDREALLAGIAGSARQHLETTTEH HHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH ELARQLSRDAEDALKGAVGGLAGGLGIGAGIGVLVGASAVDFTGGILAGLTLGSLGLFVL HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHCCEEEC PNKRLQAHRQLRQKIADLREALERIVRREYEREQERADARLRDAISPYTRFTEQERVRLE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAQKRAAELRARLDRLQAEVKALA HHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MLVSHRVQDLLSRERVLLADLQAFLETQGAPPEAIEHARQAVRSLDESFLLVVVGEFNAG CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCC KSSFVNALLGAAVLPEGVTPTTDRIYVLLHGDKPGQLEPTRDPFVSRLTYPLPSLEGVAL HHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHCCCCCCCCCEEE VDTPGTNAIIRQHQALTEGFLPRADLLLFLTSADRPFTESERQFLALAARWGRSVIMVVN EECCCCHHHHHHHHHHHHCCCCHHHHHEEEECCCCCCCHHHHHHHHHHHHHCCEEEEEEE KADLLETPEQREQVREFVEKGARGVLGLTPPVFLLSARGEQRGGDPGFAALRDALRTRLS CHHHHCCCHHHHHHHHHHHHCCCCCCCCCCHHHHEECCCCCCCCCCCHHHHHHHHHHHHH ETERTRLKLTSPLGTAAEILGGEETRAEAARQTLTEDLAILRDLEAQRARHRETMLGELD HHHHHHEEECCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GQLNRLGRLLSEFEVRADRFIDSTLRFGNLRGLLNSRDLEEKFRREAVADLPEAIDRQFG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH SMIDRFVEANLHFWEDVQAFLIRRQPQGEVARTRFSYDREALLAGIAGSARQHLETTTEH HHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH ELARQLSRDAEDALKGAVGGLAGGLGIGAGIGVLVGASAVDFTGGILAGLTLGSLGLFVL HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHCCEEEC PNKRLQAHRQLRQKIADLREALERIVRREYEREQERADARLRDAISPYTRFTEQERVRLE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAQKRAAELRARLDRLQAEVKALA HHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA