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The map label for this gene is 94986113

Identifier: 94986113

GI number: 94986113

Start: 2124051

End: 2124377

Strand: Reverse

Name: 94986113

Synonym: Dgeo_2014

Alternate gene names: NA

Gene position: 2124377-2124051 (Counterclockwise)

Preceding gene: 94986114

Following gene: 94986112

Centisome position: 86.1

GC content: 63.61

Gene sequence:

>327_bases
ATGGCCTTTCTTTCCGAAGCTCAACTGGAAACGGCACTGCTGGAGCAGCTGGCAGGGCTTAGATATGGCTATGTCAGTGA
TGATGTCTTCGGCACCAACGGCCATCGGCCGGAGCGCGAAAGCCACGACGAGGTAGTGCTGCGCGGGCGGTTCGAGGATG
CCGTTGCCCGCCTGAACCCCGGCCTACCTGCGGAGGCGCGGCAGGACGCAATCCGCAAGGTCGCGCAGTCCGAGCTGCCC
GCGCTGCTTGAAATGCGCCACCCGCACAGTCTGGTTTCCAGCGATCTGCGCATCGCCGATGCTTTCCTCAAGGAGCGCGG
CCTGTGA

Upstream 100 bases:

>100_bases
ACTTCCTGGTCGCCCGTCGTAAACTGATGGCCGATATTATTCGGCGTGGATTCGAGACCCTGAAATAGGCTCAAAGGTAT
ACATTCAAGGGCGCTGACTG

Downstream 100 bases:

>100_bases
AAACGACATCCGGAATCATCATCTACGAAGGCGCCGAAGCCCGCGTCGAAGTTCGACTTGAACGCGAGACCGTCTGGCTG
AGCCTGCAGCAGCTGGCGGA

Product: type I restriction-modification system endonuclease

Products: NA

Alternate protein names: HsdR Family Type I Site-Specific Deoxyribonuclease; Type I Restriction System Endonuclease; Type I Restriction- System R Subunit; Type I Site-Specific Deoxyribonuclease HsdR Family Protein; Type I Site-Specific Deoxyribonuclease; Type I Site-Specific Deoxyribonuclease HsdR Family

Number of amino acids: Translated: 108; Mature: 107

Protein sequence:

>108_residues
MAFLSEAQLETALLEQLAGLRYGYVSDDVFGTNGHRPERESHDEVVLRGRFEDAVARLNPGLPAEARQDAIRKVAQSELP
ALLEMRHPHSLVSSDLRIADAFLKERGL

Sequences:

>Translated_108_residues
MAFLSEAQLETALLEQLAGLRYGYVSDDVFGTNGHRPERESHDEVVLRGRFEDAVARLNPGLPAEARQDAIRKVAQSELP
ALLEMRHPHSLVSSDLRIADAFLKERGL
>Mature_107_residues
AFLSEAQLETALLEQLAGLRYGYVSDDVFGTNGHRPERESHDEVVLRGRFEDAVARLNPGLPAEARQDAIRKVAQSELPA
LLEMRHPHSLVSSDLRIADAFLKERGL

Specific function: Unknown

COG id: COG0610

COG function: function code V; Type I site-specific restriction-modification system, R (restriction) subunit and related helicases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12037; Mature: 11906

Theoretical pI: Translated: 5.19; Mature: 5.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFLSEAQLETALLEQLAGLRYGYVSDDVFGTNGHRPERESHDEVVLRGRFEDAVARLNP
CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEHHCCHHHHHHHCCC
GLPAEARQDAIRKVAQSELPALLEMRHPHSLVSSDLRIADAFLKERGL
CCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AFLSEAQLETALLEQLAGLRYGYVSDDVFGTNGHRPERESHDEVVLRGRFEDAVARLNP
CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEHHCCHHHHHHHCCC
GLPAEARQDAIRKVAQSELPALLEMRHPHSLVSSDLRIADAFLKERGL
CCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA