| Definition | Deinococcus geothermalis DSM 11300, complete genome. |
|---|---|
| Accession | NC_008025 |
| Length | 2,467,205 |
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The map label for this gene is yusP [H]
Identifier: 94986028
GI number: 94986028
Start: 2031373
End: 2032992
Strand: Reverse
Name: yusP [H]
Synonym: Dgeo_1928
Alternate gene names: 94986028
Gene position: 2032992-2031373 (Counterclockwise)
Preceding gene: 94986029
Following gene: 94986026
Centisome position: 82.4
GC content: 67.47
Gene sequence:
>1620_bases ATGACCGCTGCTCCTTCTTCTGCCGGCCTCGCACCTCGGGACAAGATCTTGGCCTTTGTCGGCATCCTGACGGTGCTGTT TCTCTCCAGCCTGAATATGACGGTGGTCGGGAGCGCGATGCCGCGCGTGATCTCGGACCTGGGCGGCTTTCACCTGTACG CCTGGGCCTTTACCGCCTACTCGCTCGCCACCACAATTACCGTCCCCATCGTGGGCACGGTCAGCGACCGCTATGGCCGC CGCCCACTGATTCTGCTCGGTATTGTTGTGTTCACCCTGGGCAGCGTGCTGCTGGGCTTCGTGCAAAACATGAATCAGCT GATTGTGCTGCGGGCGCTGCAGGGCGTGGGCGGCGGCATGCTGATGGCGATGAGCTTCACCGCCATCGCGGACCTCTTCA CGCCCATCGAGCGTGGCCGCTACCAAGGGTACACCGGGGCGGTCTGGGGCATCAGCAGTGTGGTGGGGCCGCTGGTGGGG GGCTTCCTGACCGACCATTTGGGCTGGCGCAGCGTGTTCTTCGTGAACGTGCCCTTTGCGCTGCTGGCACTGTACTTTGT CGGCCGTTTCTTCCGGATGCCTGCTCCCAGCGCTTCGCGCATGCAGCGTCCGTTTGACGCGCTGGGGGCGCTGCTGCTCG CGGGCGCGGTCGTAACCCTGACACTGGCCCTGTCCTGGGGAGGCGGCACCTATGCCTGGGACAGTCCCCGCATTCTGGGC CTGCTGGCCGCGACCCTGGTGCTGGGCGGAGGGTATGTGTGGCACAGCCGCCAGCAGGCGCAGCCCATCCTCAACCTGCG ACTGCTGCGTGACCCGGCCATCTCGCTCGCGTCCTTGGCGGGCTTCTTGACGAGCGCGGGGATGTACGCCGCGATTCTGT ACCTGCCGCTCTACATGCAGGGCGTGCGGGGCAGCAGCGCCAGCGGGAGCGGCCTGGCCCTCACGCCCCTGATGTTTGGA TTGATCGTCACGAGCACCCTCAGCGGCCAGATCGTCAGCCGCACCGGGCGCTACAAGGGGCTGATTATGGGAGGCGCTCT GGTCGCCACCGCCGCCCTGCTGCTCAGCACCACGCTGAGCACCACAACGCCGCTGTGGATCGCGGTCGGGCTGATGGTGC TGCTGGGTCTGGGCCTTGGCCCGGTCAACAGCCAGCTCACGCTCGCGGTGCAGAATGCCGCGCCGCGCGAACAGCTTGGC AGCGCCACCAGCGGCAACCAGTTTTTCCGGCAGATCGGCGGCACGCTGGCCGTCAGCCTCTTCGGGGCGCTGGTGAACGC GCAGCTCGCGCAGAACCTCGCCGCAAAGCTGCCGCCCGCAGCTGCCCAGCTGCCCGCCCCCATGCAGGACGCCATCGCCA ACCCCAACGTGCTGTCGAGCCCTCAGGCCACCGGCCAACTGGAAGCGGCCCTGGCCCGTCTGGGTCACGCGGACCTGATC ATGCCCATTCTGACGGCCCTGCGCGGCGTGATGGCGGGCGCCATTGATCACGTCTTCCTGATTGCGGGTGTGCTGGTCGG TGTCGCCTTTTTGGTCACGGCCCTGATGCCCGAACGGCCCCTCGCCGGGCGGAGAGCCGGAGCGCGGGTGGAGGGACGGC AGGCGGCGGCGACGGATTGA
Upstream 100 bases:
>100_bases TGCCGCCTGCTCAGGTGCACGCGACCCTGACCGCGCTGGAGCGCCTGGAAGCGAGCCTCGCCCTGCCTCAGGACCAGCAG TCCCTTGAGGAGGTGAGCGC
Downstream 100 bases:
>100_bases AGGAAGCTCAAAAAGTCTGGTGAGGACGTTCTTCAGGGACGTCCCGTTTTTGTTTTCAGAGGGTCTGGCCGCGTGCCTCC AGCACGACAACCGCGGAGGC
Product: major facilitator transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 539; Mature: 538
Protein sequence:
>539_residues MTAAPSSAGLAPRDKILAFVGILTVLFLSSLNMTVVGSAMPRVISDLGGFHLYAWAFTAYSLATTITVPIVGTVSDRYGR RPLILLGIVVFTLGSVLLGFVQNMNQLIVLRALQGVGGGMLMAMSFTAIADLFTPIERGRYQGYTGAVWGISSVVGPLVG GFLTDHLGWRSVFFVNVPFALLALYFVGRFFRMPAPSASRMQRPFDALGALLLAGAVVTLTLALSWGGGTYAWDSPRILG LLAATLVLGGGYVWHSRQQAQPILNLRLLRDPAISLASLAGFLTSAGMYAAILYLPLYMQGVRGSSASGSGLALTPLMFG LIVTSTLSGQIVSRTGRYKGLIMGGALVATAALLLSTTLSTTTPLWIAVGLMVLLGLGLGPVNSQLTLAVQNAAPREQLG SATSGNQFFRQIGGTLAVSLFGALVNAQLAQNLAAKLPPAAAQLPAPMQDAIANPNVLSSPQATGQLEAALARLGHADLI MPILTALRGVMAGAIDHVFLIAGVLVGVAFLVTALMPERPLAGRRAGARVEGRQAAATD
Sequences:
>Translated_539_residues MTAAPSSAGLAPRDKILAFVGILTVLFLSSLNMTVVGSAMPRVISDLGGFHLYAWAFTAYSLATTITVPIVGTVSDRYGR RPLILLGIVVFTLGSVLLGFVQNMNQLIVLRALQGVGGGMLMAMSFTAIADLFTPIERGRYQGYTGAVWGISSVVGPLVG GFLTDHLGWRSVFFVNVPFALLALYFVGRFFRMPAPSASRMQRPFDALGALLLAGAVVTLTLALSWGGGTYAWDSPRILG LLAATLVLGGGYVWHSRQQAQPILNLRLLRDPAISLASLAGFLTSAGMYAAILYLPLYMQGVRGSSASGSGLALTPLMFG LIVTSTLSGQIVSRTGRYKGLIMGGALVATAALLLSTTLSTTTPLWIAVGLMVLLGLGLGPVNSQLTLAVQNAAPREQLG SATSGNQFFRQIGGTLAVSLFGALVNAQLAQNLAAKLPPAAAQLPAPMQDAIANPNVLSSPQATGQLEAALARLGHADLI MPILTALRGVMAGAIDHVFLIAGVLVGVAFLVTALMPERPLAGRRAGARVEGRQAAATD >Mature_538_residues TAAPSSAGLAPRDKILAFVGILTVLFLSSLNMTVVGSAMPRVISDLGGFHLYAWAFTAYSLATTITVPIVGTVSDRYGRR PLILLGIVVFTLGSVLLGFVQNMNQLIVLRALQGVGGGMLMAMSFTAIADLFTPIERGRYQGYTGAVWGISSVVGPLVGG FLTDHLGWRSVFFVNVPFALLALYFVGRFFRMPAPSASRMQRPFDALGALLLAGAVVTLTLALSWGGGTYAWDSPRILGL LAATLVLGGGYVWHSRQQAQPILNLRLLRDPAISLASLAGFLTSAGMYAAILYLPLYMQGVRGSSASGSGLALTPLMFGL IVTSTLSGQIVSRTGRYKGLIMGGALVATAALLLSTTLSTTTPLWIAVGLMVLLGLGLGPVNSQLTLAVQNAAPREQLGS ATSGNQFFRQIGGTLAVSLFGALVNAQLAQNLAAKLPPAAAQLPAPMQDAIANPNVLSSPQATGQLEAALARLGHADLIM PILTALRGVMAGAIDHVFLIAGVLVGVAFLVTALMPERPLAGRRAGARVEGRQAAATD
Specific function: Unknown
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. EmrB family [H]
Homologues:
Organism=Escherichia coli, GI87081983, Length=419, Percent_Identity=28.8782816229117, Blast_Score=120, Evalue=2e-28, Organism=Escherichia coli, GI1790195, Length=385, Percent_Identity=23.3766233766234, Blast_Score=108, Evalue=6e-25, Organism=Escherichia coli, GI1789042, Length=430, Percent_Identity=23.2558139534884, Blast_Score=104, Evalue=1e-23, Organism=Escherichia coli, GI1788392, Length=397, Percent_Identity=29.4710327455919, Blast_Score=96, Evalue=7e-21, Organism=Escherichia coli, GI1788710, Length=404, Percent_Identity=24.5049504950495, Blast_Score=93, Evalue=5e-20, Organism=Escherichia coli, GI48994889, Length=102, Percent_Identity=33.3333333333333, Blast_Score=67, Evalue=3e-12, Organism=Escherichia coli, GI1790146, Length=189, Percent_Identity=25.9259259259259, Blast_Score=63, Evalue=4e-11, Organism=Saccharomyces cerevisiae, GI6322958, Length=475, Percent_Identity=24.4210526315789, Blast_Score=129, Evalue=1e-30, Organism=Saccharomyces cerevisiae, GI6321663, Length=473, Percent_Identity=24.7357293868922, Blast_Score=126, Evalue=9e-30, Organism=Saccharomyces cerevisiae, GI6323735, Length=433, Percent_Identity=26.0969976905312, Blast_Score=109, Evalue=1e-24, Organism=Saccharomyces cerevisiae, GI6319770, Length=466, Percent_Identity=27.0386266094421, Blast_Score=104, Evalue=3e-23, Organism=Saccharomyces cerevisiae, GI6319783, Length=396, Percent_Identity=23.7373737373737, Blast_Score=97, Evalue=9e-21, Organism=Saccharomyces cerevisiae, GI6325455, Length=438, Percent_Identity=23.0593607305936, Blast_Score=87, Evalue=8e-18, Organism=Saccharomyces cerevisiae, GI6322070, Length=104, Percent_Identity=35.5769230769231, Blast_Score=68, Evalue=4e-12, Organism=Saccharomyces cerevisiae, GI6322071, Length=105, Percent_Identity=31.4285714285714, Blast_Score=66, Evalue=1e-11, Organism=Saccharomyces cerevisiae, GI6324954, Length=367, Percent_Identity=24.7956403269755, Blast_Score=65, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004638 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR005829 - InterPro: IPR001411 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 56067; Mature: 55936
Theoretical pI: Translated: 11.10; Mature: 11.10
Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAAPSSAGLAPRDKILAFVGILTVLFLSSLNMTVVGSAMPRVISDLGGFHLYAWAFTAY CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHH SLATTITVPIVGTVSDRYGRRPLILLGIVVFTLGSVLLGFVQNMNQLIVLRALQGVGGGM HHHHHEEEEEEEECHHHCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCHH LMAMSFTAIADLFTPIERGRYQGYTGAVWGISSVVGPLVGGFLTDHLGWRSVFFVNVPFA HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHH LLALYFVGRFFRMPAPSASRMQRPFDALGALLLAGAVVTLTLALSWGGGTYAWDSPRILG HHHHHHHHHHHCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCHHHH LLAATLVLGGGYVWHSRQQAQPILNLRLLRDPAISLASLAGFLTSAGMYAAILYLPLYMQ HHHHHHHHCCCCEECCCHHCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GVRGSSASGSGLALTPLMFGLIVTSTLSGQIVSRTGRYKGLIMGGALVATAALLLSTTLS CCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHCCCCCCEEEECHHHHHHHHHHHHHHHH TTTPLWIAVGLMVLLGLGLGPVNSQLTLAVQNAAPREQLGSATSGNQFFRQIGGTLAVSL CCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHCCCCCHHHHHHHHHHHHHHHH FGALVNAQLAQNLAAKLPPAAAQLPAPMQDAIANPNVLSSPQATGQLEAALARLGHADLI HHHHHHHHHHHHHHHHCCCCHHHCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHCCCHHHH MPILTALRGVMAGAIDHVFLIAGVLVGVAFLVTALMPERPLAGRRAGARVEGRQAAATD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TAAPSSAGLAPRDKILAFVGILTVLFLSSLNMTVVGSAMPRVISDLGGFHLYAWAFTAY CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHH SLATTITVPIVGTVSDRYGRRPLILLGIVVFTLGSVLLGFVQNMNQLIVLRALQGVGGGM HHHHHEEEEEEEECHHHCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCHH LMAMSFTAIADLFTPIERGRYQGYTGAVWGISSVVGPLVGGFLTDHLGWRSVFFVNVPFA HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHH LLALYFVGRFFRMPAPSASRMQRPFDALGALLLAGAVVTLTLALSWGGGTYAWDSPRILG HHHHHHHHHHHCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCHHHH LLAATLVLGGGYVWHSRQQAQPILNLRLLRDPAISLASLAGFLTSAGMYAAILYLPLYMQ HHHHHHHHCCCCEECCCHHCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GVRGSSASGSGLALTPLMFGLIVTSTLSGQIVSRTGRYKGLIMGGALVATAALLLSTTLS CCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHCCCCCCEEEECHHHHHHHHHHHHHHHH TTTPLWIAVGLMVLLGLGLGPVNSQLTLAVQNAAPREQLGSATSGNQFFRQIGGTLAVSL CCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHCCCCCHHHHHHHHHHHHHHHH FGALVNAQLAQNLAAKLPPAAAQLPAPMQDAIANPNVLSSPQATGQLEAALARLGHADLI HHHHHHHHHHHHHHHHCCCCHHHCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHCCCHHHH MPILTALRGVMAGAIDHVFLIAGVLVGVAFLVTALMPERPLAGRRAGARVEGRQAAATD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]