| Definition | Deinococcus geothermalis DSM 11300, complete genome. |
|---|---|
| Accession | NC_008025 |
| Length | 2,467,205 |
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The map label for this gene is 94985970
Identifier: 94985970
GI number: 94985970
Start: 1967221
End: 1967637
Strand: Reverse
Name: 94985970
Synonym: Dgeo_1870
Alternate gene names: NA
Gene position: 1967637-1967221 (Counterclockwise)
Preceding gene: 94985971
Following gene: 94985969
Centisome position: 79.75
GC content: 58.75
Gene sequence:
>417_bases ATGACTTCGTCTGTTCCGCCTCCAGGTCGCCGGCCCGCGCGTCTCGCGTTCCTGACGGTACCGCTTTTGATTGGCCTGAT CTACAACGTCATCTCGCTGCTGAGCCTGCCCTTTTCAGGCGAGACGCTCAATATCCTGTTGAACGATCTCAGCGTGGCTT CAGGGCAACCGCCCGTGGTGTTGTCTCCGGAACAAATCCTGACGGTGTTGTGGGTGTCCTTTTTTCTGACAGCTGGCCTG ATCCTGCTGCTGTATTTCACGCGCCGTGCACTGCTGGAAGGCCGCAGCTGGGGCCGGGTATCGAGCATCGTGATTGCGGT GCTGAGCCTGCTGATTTTTCCAGTCGGTACAGTCCTTGGCGTCATCATGCTGATCGGCGCTTTTGACCGGGACGTACAGG CCTACACCAGCCGCTGA
Upstream 100 bases:
>100_bases GAGGGAAGTGGGGAGGAGGTCCAGGTGGGCGCGTCCTCCCCACTTCTTTTATCTGCGTGAAGTTTTTGTCTGTGTGAAGC GTCCGCGCTAGCCTGCACGT
Downstream 100 bases:
>100_bases CGGAGCTGGGCCCGGAGGTCTTGAAGCGGCGGGCTTTTTTTAGTATTTTGACAAGTCGGTGCGCCGGGAGTCTTGACAAC CGCGCAACGTGCCAGCAAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 138; Mature: 137
Protein sequence:
>138_residues MTSSVPPPGRRPARLAFLTVPLLIGLIYNVISLLSLPFSGETLNILLNDLSVASGQPPVVLSPEQILTVLWVSFFLTAGL ILLLYFTRRALLEGRSWGRVSSIVIAVLSLLIFPVGTVLGVIMLIGAFDRDVQAYTSR
Sequences:
>Translated_138_residues MTSSVPPPGRRPARLAFLTVPLLIGLIYNVISLLSLPFSGETLNILLNDLSVASGQPPVVLSPEQILTVLWVSFFLTAGL ILLLYFTRRALLEGRSWGRVSSIVIAVLSLLIFPVGTVLGVIMLIGAFDRDVQAYTSR >Mature_137_residues TSSVPPPGRRPARLAFLTVPLLIGLIYNVISLLSLPFSGETLNILLNDLSVASGQPPVVLSPEQILTVLWVSFFLTAGLI LLLYFTRRALLEGRSWGRVSSIVIAVLSLLIFPVGTVLGVIMLIGAFDRDVQAYTSR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14963; Mature: 14832
Theoretical pI: Translated: 10.37; Mature: 10.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSSVPPPGRRPARLAFLTVPLLIGLIYNVISLLSLPFSGETLNILLNDLSVASGQPPVV CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCEE LSPEQILTVLWVSFFLTAGLILLLYFTRRALLEGRSWGRVSSIVIAVLSLLIFPVGTVLG ECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH VIMLIGAFDRDVQAYTSR HHHHHHHHCHHHHHHCCC >Mature Secondary Structure TSSVPPPGRRPARLAFLTVPLLIGLIYNVISLLSLPFSGETLNILLNDLSVASGQPPVV CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCEE LSPEQILTVLWVSFFLTAGLILLLYFTRRALLEGRSWGRVSSIVIAVLSLLIFPVGTVLG ECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH VIMLIGAFDRDVQAYTSR HHHHHHHHCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA