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The map label for this gene is rpmC

Identifier: 94985959

GI number: 94985959

Start: 1960975

End: 1961199

Strand: Reverse

Name: rpmC

Synonym: Dgeo_1859

Alternate gene names: 94985959

Gene position: 1961199-1960975 (Counterclockwise)

Preceding gene: 94985960

Following gene: 94985958

Centisome position: 79.49

GC content: 63.56

Gene sequence:

>225_bases
ATGAAGCTCAGTGACATGCGCGCGCTGTCGGCGGCCGATTTTGACAAGGAAATCGCGGCCCGCAAGAAGGAACTGATGGA
GCTGCGCTTTCAGGCAGCGATGGGCCAGCTGGCTCAGCCGCACCGCGTCAAGCAGCTCAAGCGTGAAGTGGCGCAGCTGA
ACACCATTCGCAGCGAGCAGAGCCGTGCTGCGCGGGTGGCCGCCCAGACCGGAGAGAGCCAATGA

Upstream 100 bases:

>100_bases
GAGGTGTCGGGTGTGACCGAAGAGCAGGCGCGGGAAGCGTTCCGCCTGGCCGGTCACAAGCTGCCCATCCAGACCAAGAT
GGTCAAGCGCGAGGTGTACG

Downstream 100 bases:

>100_bases
AAAAGACCTTTACGGGTGTTGTGGTGAGCGACAAGGCTGACAAGACCGTCAGTGTCAAGGTCGAACGCCGCTTCATGCAC
CCCCTGTATGGCAAGGTCGT

Product: 50S ribosomal protein L29

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 74; Mature: 74

Protein sequence:

>74_residues
MKLSDMRALSAADFDKEIAARKKELMELRFQAAMGQLAQPHRVKQLKREVAQLNTIRSEQSRAARVAAQTGESQ

Sequences:

>Translated_74_residues
MKLSDMRALSAADFDKEIAARKKELMELRFQAAMGQLAQPHRVKQLKREVAQLNTIRSEQSRAARVAAQTGESQ
>Mature_74_residues
MKLSDMRALSAADFDKEIAARKKELMELRFQAAMGQLAQPHRVKQLKREVAQLNTIRSEQSRAARVAAQTGESQ

Specific function: Unknown

COG id: COG0255

COG function: function code J; Ribosomal protein L29

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L29P family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL29_DEIGD (Q1IX80)

Other databases:

- EMBL:   CP000359
- RefSeq:   YP_605323.1
- ProteinModelPortal:   Q1IX80
- SMR:   Q1IX80
- STRING:   Q1IX80
- GeneID:   4057589
- GenomeReviews:   CP000359_GR
- KEGG:   dge:Dgeo_1859
- NMPDR:   fig|68909.1.peg.198
- eggNOG:   COG0255
- HOGENOM:   HBG730819
- OMA:   LRFQAAM
- ProtClustDB:   PRK00306
- BioCyc:   DGEO319795:DGEO_1859-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00374_B
- InterPro:   IPR001854
- InterPro:   IPR018254
- Gene3D:   G3DSA:1.10.287.310
- TIGRFAMs:   TIGR00012

Pfam domain/function: PF00831 Ribosomal_L29; SSF46561 Ribosomal_L29

EC number: NA

Molecular weight: Translated: 8341; Mature: 8341

Theoretical pI: Translated: 11.02; Mature: 11.02

Prosite motif: PS00579 RIBOSOMAL_L29

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.4 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLSDMRALSAADFDKEIAARKKELMELRFQAAMGQLAQPHRVKQLKREVAQLNTIRSEQ
CCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
SRAARVAAQTGESQ
HHHHHHHHHCCCCC
>Mature Secondary Structure
MKLSDMRALSAADFDKEIAARKKELMELRFQAAMGQLAQPHRVKQLKREVAQLNTIRSEQ
CCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
SRAARVAAQTGESQ
HHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA