| Definition | Deinococcus geothermalis DSM 11300, complete genome. |
|---|---|
| Accession | NC_008025 |
| Length | 2,467,205 |
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The map label for this gene is adk
Identifier: 94985946
GI number: 94985946
Start: 1954347
End: 1954940
Strand: Reverse
Name: adk
Synonym: Dgeo_1846
Alternate gene names: 94985946
Gene position: 1954940-1954347 (Counterclockwise)
Preceding gene: 94985947
Following gene: 94985945
Centisome position: 79.24
GC content: 62.29
Gene sequence:
>594_bases ATGACACAATCCAAAAACAAGGTCGTGATTTTCCTCGGCCCGCCCGGTGCGGGCAAGGGCACCCAGGCCGAGCGCCTGGC CCGTGAGCAGAATCTGGCCAAAATCAGTACCGGGGATATCCTGCGTGACCATGTAGCACGGGGCACCGCACTTGGCCAGC GGGTCAAACCTATCCTCGATGCCGGACAGCTCGTTCCCGATGACATCTTGATTGCTTTGATCCGTGACCGCCTGGCAGGA ATGGAACCGGTACGCGTGATTTTTGACGGCTTCCCGCGCACCTGCGCGCAGGCGGAGGCGCTCGATATGCTGCTGGAAGA ATTGGGCGCGCCGGTGAGTGCGGTGCCACTGCTCGAGGTGCCTGATGAGACGCTCATCGAGCGCATCGTGGAGCGCGGGC GACAAGCTGCTCTTCGGGGCGAGCCGGTTCGCAGCGATGACACCGAAGAGGTAGCGCGGCGGCGCCAGCAGGTCTATCGC GAGCAGACCCAGCCATTGATCGACTACTATGCGGCACGCGGCCATCTTCAGCACGTCAATGGTGTGGGAACGCCGGATGA GGTCTACAACCGCATCCTGCAAGTCGTGCGCTAG
Upstream 100 bases:
>100_bases ATCTGCTGCCGGTTCCGTCACCATAGAGGGAACAGGGCTGGGCAGCAGCGCGTTGGTGTTGCTGCTGGGCCTCTATGCTG TAGAGCCTAGAGGAGGAACG
Downstream 100 bases:
>100_bases TTGGCTGCGGGCGGAGCAGCGCACCTTCCGGAGGAAACACCGGCAATTTCCACCCCCTGTTCGCCGTCCCTCTTGCTGAT TGGGATGAGGTCATGCTAGC
Product: adenylate kinase
Products: NA
Alternate protein names: AK; ATP-AMP transphosphorylase
Number of amino acids: Translated: 197; Mature: 196
Protein sequence:
>197_residues MTQSKNKVVIFLGPPGAGKGTQAERLAREQNLAKISTGDILRDHVARGTALGQRVKPILDAGQLVPDDILIALIRDRLAG MEPVRVIFDGFPRTCAQAEALDMLLEELGAPVSAVPLLEVPDETLIERIVERGRQAALRGEPVRSDDTEEVARRRQQVYR EQTQPLIDYYAARGHLQHVNGVGTPDEVYNRILQVVR
Sequences:
>Translated_197_residues MTQSKNKVVIFLGPPGAGKGTQAERLAREQNLAKISTGDILRDHVARGTALGQRVKPILDAGQLVPDDILIALIRDRLAG MEPVRVIFDGFPRTCAQAEALDMLLEELGAPVSAVPLLEVPDETLIERIVERGRQAALRGEPVRSDDTEEVARRRQQVYR EQTQPLIDYYAARGHLQHVNGVGTPDEVYNRILQVVR >Mature_196_residues TQSKNKVVIFLGPPGAGKGTQAERLAREQNLAKISTGDILRDHVARGTALGQRVKPILDAGQLVPDDILIALIRDRLAGM EPVRVIFDGFPRTCAQAEALDMLLEELGAPVSAVPLLEVPDETLIERIVERGRQAALRGEPVRSDDTEEVARRRQQVYRE QTQPLIDYYAARGHLQHVNGVGTPDEVYNRILQVVR
Specific function: Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. This small ubiquitous enzyme involved in the energy metabolism and nucleotide synthesis, is essential for maintenance and cell growth
COG id: COG0563
COG function: function code F; Adenylate kinase and related kinases
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the adenylate kinase family
Homologues:
Organism=Homo sapiens, GI4502013, Length=206, Percent_Identity=40.7766990291262, Blast_Score=137, Evalue=5e-33, Organism=Homo sapiens, GI7524346, Length=206, Percent_Identity=40.7766990291262, Blast_Score=137, Evalue=6e-33, Organism=Homo sapiens, GI4502011, Length=190, Percent_Identity=31.5789473684211, Blast_Score=119, Evalue=2e-27, Organism=Homo sapiens, GI19923437, Length=196, Percent_Identity=34.1836734693878, Blast_Score=117, Evalue=6e-27, Organism=Homo sapiens, GI7706497, Length=195, Percent_Identity=30.7692307692308, Blast_Score=107, Evalue=5e-24, Organism=Homo sapiens, GI310110345, Length=196, Percent_Identity=33.6734693877551, Blast_Score=102, Evalue=2e-22, Organism=Homo sapiens, GI53832003, Length=196, Percent_Identity=33.6734693877551, Blast_Score=102, Evalue=2e-22, Organism=Homo sapiens, GI8051579, Length=196, Percent_Identity=33.6734693877551, Blast_Score=102, Evalue=2e-22, Organism=Homo sapiens, GI53832001, Length=196, Percent_Identity=33.6734693877551, Blast_Score=102, Evalue=2e-22, Organism=Homo sapiens, GI28144899, Length=194, Percent_Identity=29.3814432989691, Blast_Score=100, Evalue=7e-22, Organism=Homo sapiens, GI28144897, Length=194, Percent_Identity=29.3814432989691, Blast_Score=100, Evalue=8e-22, Organism=Homo sapiens, GI22749187, Length=126, Percent_Identity=32.5396825396825, Blast_Score=69, Evalue=2e-12, Organism=Escherichia coli, GI1786680, Length=186, Percent_Identity=40.8602150537634, Blast_Score=123, Evalue=8e-30, Organism=Caenorhabditis elegans, GI17552384, Length=209, Percent_Identity=38.755980861244, Blast_Score=129, Evalue=1e-30, Organism=Caenorhabditis elegans, GI17567503, Length=185, Percent_Identity=29.1891891891892, Blast_Score=109, Evalue=9e-25, Organism=Caenorhabditis elegans, GI17537943, Length=213, Percent_Identity=34.2723004694836, Blast_Score=100, Evalue=9e-22, Organism=Caenorhabditis elegans, GI17533833, Length=193, Percent_Identity=29.5336787564767, Blast_Score=89, Evalue=1e-18, Organism=Caenorhabditis elegans, GI17550688, Length=193, Percent_Identity=29.0155440414508, Blast_Score=85, Evalue=2e-17, Organism=Caenorhabditis elegans, GI25147457, Length=194, Percent_Identity=24.2268041237113, Blast_Score=69, Evalue=2e-12, Organism=Saccharomyces cerevisiae, GI6320432, Length=217, Percent_Identity=37.7880184331797, Blast_Score=139, Evalue=4e-34, Organism=Saccharomyces cerevisiae, GI6321018, Length=195, Percent_Identity=38.4615384615385, Blast_Score=120, Evalue=2e-28, Organism=Saccharomyces cerevisiae, GI6322828, Length=194, Percent_Identity=29.8969072164948, Blast_Score=108, Evalue=7e-25, Organism=Drosophila melanogaster, GI22026816, Length=210, Percent_Identity=36.6666666666667, Blast_Score=130, Evalue=7e-31, Organism=Drosophila melanogaster, GI17737899, Length=198, Percent_Identity=32.3232323232323, Blast_Score=102, Evalue=2e-22, Organism=Drosophila melanogaster, GI24645822, Length=198, Percent_Identity=32.3232323232323, Blast_Score=102, Evalue=2e-22, Organism=Drosophila melanogaster, GI221459597, Length=197, Percent_Identity=24.3654822335025, Blast_Score=91, Evalue=4e-19, Organism=Drosophila melanogaster, GI21356893, Length=197, Percent_Identity=24.3654822335025, Blast_Score=91, Evalue=4e-19, Organism=Drosophila melanogaster, GI17647141, Length=191, Percent_Identity=26.1780104712042, Blast_Score=89, Evalue=1e-18, Organism=Drosophila melanogaster, GI24663208, Length=191, Percent_Identity=26.1780104712042, Blast_Score=89, Evalue=2e-18,
Paralogues:
None
Copy number: 1640 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 60 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 847 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): KAD_DEIGD (Q1IX93)
Other databases:
- EMBL: CP000359 - RefSeq: YP_605310.1 - ProteinModelPortal: Q1IX93 - SMR: Q1IX93 - STRING: Q1IX93 - GeneID: 4057576 - GenomeReviews: CP000359_GR - KEGG: dge:Dgeo_1846 - NMPDR: fig|68909.1.peg.211 - eggNOG: COG0563 - HOGENOM: HBG630208 - OMA: MVLIGPP - ProtClustDB: PRK14527 - BioCyc: DGEO319795:DGEO_1846-MONOMER - GO: GO:0005737 - HAMAP: MF_00235 - InterPro: IPR006259 - InterPro: IPR000850 - PANTHER: PTHR23359 - PRINTS: PR00094 - TIGRFAMs: TIGR01351
Pfam domain/function: PF00406 ADK
EC number: =2.7.4.3
Molecular weight: Translated: 21801; Mature: 21670
Theoretical pI: Translated: 6.29; Mature: 6.29
Prosite motif: PS00113 ADENYLATE_KINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQSKNKVVIFLGPPGAGKGTQAERLAREQNLAKISTGDILRDHVARGTALGQRVKPILD CCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH AGQLVPDDILIALIRDRLAGMEPVRVIFDGFPRTCAQAEALDMLLEELGAPVSAVPLLEV CCCCCHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC PDETLIERIVERGRQAALRGEPVRSDDTEEVARRRQQVYREQTQPLIDYYAARGHLQHVN CCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCC GVGTPDEVYNRILQVVR CCCCHHHHHHHHHHHHC >Mature Secondary Structure TQSKNKVVIFLGPPGAGKGTQAERLAREQNLAKISTGDILRDHVARGTALGQRVKPILD CCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH AGQLVPDDILIALIRDRLAGMEPVRVIFDGFPRTCAQAEALDMLLEELGAPVSAVPLLEV CCCCCHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC PDETLIERIVERGRQAALRGEPVRSDDTEEVARRRQQVYREQTQPLIDYYAARGHLQHVN CCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCC GVGTPDEVYNRILQVVR CCCCHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA