| Definition | Deinococcus geothermalis DSM 11300, complete genome. |
|---|---|
| Accession | NC_008025 |
| Length | 2,467,205 |
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The map label for this gene is wecB [H]
Identifier: 94985395
GI number: 94985395
Start: 1373633
End: 1374790
Strand: Reverse
Name: wecB [H]
Synonym: Dgeo_1294
Alternate gene names: 94985395
Gene position: 1374790-1373633 (Counterclockwise)
Preceding gene: 94985396
Following gene: 94985394
Centisome position: 55.72
GC content: 70.9
Gene sequence:
>1158_bases ATGACCGATCTCGCCCGCCCTTCCCAGTCCAAACGCATCGTTCTCGCTTTCGGCACCCGGCCCGAGGCCACCAAAATGGC CCCGGTCTACGCGGCCATCGCGCGGCAGCCTGGTCTCACGCCGCTGATCCTCTCCACCGGTCAGCAGCGCCAGATGCTCG ACGAGGCGCTGGCCGTCTTTGGTCTGACCCCCGATGAGGACCTGAACGTGATGACCGACCGCCAGACCCTGGCCGAACTC ACCGGGCGGATCGTGCCCCAGGCCGGGCGCAAGCTGCGCGAGCTGGGCGCGGACATGGTGCTGGTGCACGGCGATACCAC CACCTCCTTCTGCGTGGCTCTGAGCGCCTTTTACGAGGGCATCCCGGTGGGACACGTCGAGGCGGGGCTGCGCAGCGGCA ACATGCGGGAACCCTTCCCCGAGGAGGCCAACCGCCGCCTGACGGGGGTGCTCACCACCCTCGATTTCGCGCCCACACCG GGCAGCCGGGCCAACCTGCGGCGCGAGGGCAAGGCGGAGGAGGGCATCTTCGTGACCGGGCAGACGGCGGTCGACGCGGT GCGCGAGGTGGCGGGCCGGGTGCCGCTGCGTCCCGAGTGGCAAGCCAGGCTGGACGCCGGACAGCGCCTGGTGACCGTCA CCATGCACCGCCGTGAGAACCTGCCGGTGATGGCCCAGATGGCGCAGGCGCTGGCGGACGTGGCCCGCGCCCACCCGGAC ACCCATTTTGTGTACCCCGTCCACCTGAACCCCGCCGTGCAGGAGGCGGTGCGCCCGGCCCTCGGTCAGCTCCCCAACTT CGAGCTCACCGAACCGCTCGATTACGCCCAGATGGCCCCCCTGATGGCGGCCTCTACGCTGCTTGCCACCGACAGCGGCG GCTTGCAGGAGGAGGGGGCGGCGCTGGGCGTGCCCGTCGCGGTGCTGCGCAACGTGACTGAGCGGCCCGAGGGGGTGGAG GCGGGCGTCCTGGTCCTGGCTGGCAATGACCCCGAGCAGATGCGCACCGTGCTCAATGGCCTGCTGGACGACGAGGCGGG GCTGGCCCGCATGCGCACCGCGCGCAATCCCTATGGGGACGGGCAGGCGTCTGGGCGCATCGCACAGGCCATCGCCTGGT TCTTCGGGTTGGGCGAACGGCCGGCCGACTGGTCGTGA
Upstream 100 bases:
>100_bases CTCTGGTCTGGGCGCAGGTTGATGGCGGGCAAAGCCGCGGCTTCTGGCGTAGGCGCGTCACCTGCGGTGCCTGGACCGCG GCTCTGCTACCGTGACCCGG
Downstream 100 bases:
>100_bases AGCGCAAAGAGGCGCTCTCTCCTGTGTCTGACGTGACCGAAGTGTCGTCTTCCCAGCTCCTCCCCGCCCGGCACTATGCC GTCGTGCTCAATCCCAGCGC
Product: UDP-N-acetylglucosamine 2-epimerase
Products: NA
Alternate protein names: UDP-GlcNAc-2-epimerase [H]
Number of amino acids: Translated: 385; Mature: 384
Protein sequence:
>385_residues MTDLARPSQSKRIVLAFGTRPEATKMAPVYAAIARQPGLTPLILSTGQQRQMLDEALAVFGLTPDEDLNVMTDRQTLAEL TGRIVPQAGRKLRELGADMVLVHGDTTTSFCVALSAFYEGIPVGHVEAGLRSGNMREPFPEEANRRLTGVLTTLDFAPTP GSRANLRREGKAEEGIFVTGQTAVDAVREVAGRVPLRPEWQARLDAGQRLVTVTMHRRENLPVMAQMAQALADVARAHPD THFVYPVHLNPAVQEAVRPALGQLPNFELTEPLDYAQMAPLMAASTLLATDSGGLQEEGAALGVPVAVLRNVTERPEGVE AGVLVLAGNDPEQMRTVLNGLLDDEAGLARMRTARNPYGDGQASGRIAQAIAWFFGLGERPADWS
Sequences:
>Translated_385_residues MTDLARPSQSKRIVLAFGTRPEATKMAPVYAAIARQPGLTPLILSTGQQRQMLDEALAVFGLTPDEDLNVMTDRQTLAEL TGRIVPQAGRKLRELGADMVLVHGDTTTSFCVALSAFYEGIPVGHVEAGLRSGNMREPFPEEANRRLTGVLTTLDFAPTP GSRANLRREGKAEEGIFVTGQTAVDAVREVAGRVPLRPEWQARLDAGQRLVTVTMHRRENLPVMAQMAQALADVARAHPD THFVYPVHLNPAVQEAVRPALGQLPNFELTEPLDYAQMAPLMAASTLLATDSGGLQEEGAALGVPVAVLRNVTERPEGVE AGVLVLAGNDPEQMRTVLNGLLDDEAGLARMRTARNPYGDGQASGRIAQAIAWFFGLGERPADWS >Mature_384_residues TDLARPSQSKRIVLAFGTRPEATKMAPVYAAIARQPGLTPLILSTGQQRQMLDEALAVFGLTPDEDLNVMTDRQTLAELT GRIVPQAGRKLRELGADMVLVHGDTTTSFCVALSAFYEGIPVGHVEAGLRSGNMREPFPEEANRRLTGVLTTLDFAPTPG SRANLRREGKAEEGIFVTGQTAVDAVREVAGRVPLRPEWQARLDAGQRLVTVTMHRRENLPVMAQMAQALADVARAHPDT HFVYPVHLNPAVQEAVRPALGQLPNFELTEPLDYAQMAPLMAASTLLATDSGGLQEEGAALGVPVAVLRNVTERPEGVEA GVLVLAGNDPEQMRTVLNGLLDDEAGLARMRTARNPYGDGQASGRIAQAIAWFFGLGERPADWS
Specific function: Catalyzes the reversible epimerization at C-2 of UDP-N- acetylglucosamine (UDP-GlcNAc) and thereby provides bacteria with UDP-N-acetylmannosamine (UDP-ManNAc), the activated donor of ManNAc residues [H]
COG id: COG0381
COG function: function code M; UDP-N-acetylglucosamine 2-epimerase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UDP-N-acetylglucosamine 2-epimerase family [H]
Homologues:
Organism=Escherichia coli, GI48994967, Length=368, Percent_Identity=46.7391304347826, Blast_Score=309, Evalue=2e-85,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003331 [H]
Pfam domain/function: PF02350 Epimerase_2 [H]
EC number: =5.1.3.14 [H]
Molecular weight: Translated: 41491; Mature: 41360
Theoretical pI: Translated: 5.15; Mature: 5.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDLARPSQSKRIVLAFGTRPEATKMAPVYAAIARQPGLTPLILSTGQQRQMLDEALAVF CCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHH GLTPDEDLNVMTDRQTLAELTGRIVPQAGRKLRELGADMVLVHGDTTTSFCVALSAFYEG CCCCCCCCCEEEHHHHHHHHHHHHCCHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHCC IPVGHVEAGLRSGNMREPFPEEANRRLTGVLTTLDFAPTPGSRANLRREGKAEEGIFVTG CCCCHHHHHCCCCCCCCCCCHHHCCHHHHHEEEEECCCCCCCCCCCCCCCCCCCCEEEEC QTAVDAVREVAGRVPLRPEWQARLDAGQRLVTVTMHRRENLPVMAQMAQALADVARAHPD HHHHHHHHHHHCCCCCCCCHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCC THFVYPVHLNPAVQEAVRPALGQLPNFELTEPLDYAQMAPLMAASTLLATDSGGLQEEGA CEEEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCC ALGVPVAVLRNVTERPEGVEAGVLVLAGNDPEQMRTVLNGLLDDEAGLARMRTARNPYGD CCCCHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCCC GQASGRIAQAIAWFFGLGERPADWS CCCCHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure TDLARPSQSKRIVLAFGTRPEATKMAPVYAAIARQPGLTPLILSTGQQRQMLDEALAVF CCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHH GLTPDEDLNVMTDRQTLAELTGRIVPQAGRKLRELGADMVLVHGDTTTSFCVALSAFYEG CCCCCCCCCEEEHHHHHHHHHHHHCCHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHCC IPVGHVEAGLRSGNMREPFPEEANRRLTGVLTTLDFAPTPGSRANLRREGKAEEGIFVTG CCCCHHHHHCCCCCCCCCCCHHHCCHHHHHEEEEECCCCCCCCCCCCCCCCCCCCEEEEC QTAVDAVREVAGRVPLRPEWQARLDAGQRLVTVTMHRRENLPVMAQMAQALADVARAHPD HHHHHHHHHHHCCCCCCCCHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCC THFVYPVHLNPAVQEAVRPALGQLPNFELTEPLDYAQMAPLMAASTLLATDSGGLQEEGA CEEEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCC ALGVPVAVLRNVTERPEGVEAGVLVLAGNDPEQMRTVLNGLLDDEAGLARMRTARNPYGD CCCCHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCCC GQASGRIAQAIAWFFGLGERPADWS CCCCHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11677608; 12644504 [H]