| Definition | Deinococcus geothermalis DSM 11300, complete genome. |
|---|---|
| Accession | NC_008025 |
| Length | 2,467,205 |
Click here to switch to the map view.
The map label for this gene is 94985392
Identifier: 94985392
GI number: 94985392
Start: 1370612
End: 1371775
Strand: Reverse
Name: 94985392
Synonym: Dgeo_1291
Alternate gene names: NA
Gene position: 1371775-1370612 (Counterclockwise)
Preceding gene: 94985393
Following gene: 94985390
Centisome position: 55.6
GC content: 66.58
Gene sequence:
>1164_bases ATGGCCACCCCACCTCCTGCCCTGCGCAACAAGGGCCGGTACCTGCTCGCAGCGCTCGCCCTGGCGGGAGGGCTGTGGGC TTGTCGCCGCCCGGAAAGTGCTGTGCCGCCTGCTCCGGCTCAGGCCAGTACAGCTGCGGTGGCTCCCCCCACCGCCCACT GCCTTGGTCCCGCGCCGACTGTCTCGCCGGCCCCTCCGCCGCCGCTGCCTTTGAGTGGCCGCCTGGGCCTGTGGGTTGCG GAGGTCGACCCGGTCACGCTGCGGTCCCTGCGGGCCGTCGCCGAAAACCCGAACGGGGTCTTCCCGCTCGCCAGTACCTA CAAACAGGCGGTGCTGTGGGCGGTGCTGCAGCAGTTTGATGCCGGGACGCTGCTCCCGACTGAGCGGTTCAATGTGACGC GCGAGAATCAGAGCCTGGGCAAGTATCCCTACGACGGCACCAGCATCAAAGACCTCACCATTCGCATGATCCGCAACAGC GACAACACCGCGACCGACATCCTGCATCGCCGCGTGGGGTTGAAGGCCGTGCAGGCAGTGGCAGATCGCCTGGGCCTTTG CCACACCCGCTTGATCCTGCCCACCAAGGCGTGGTGGGCGGCGCAGGCCGGTTTGTCGAACACCTTCAACGGATCGGACC GTTGGGAGGCCGCCACCGGTGAGGAGCGGGCCCAGTTGGCCGCCGCCATCGATGCCGACGCGCAGAAGTACCGCTCGGAC TTCCTTCAGCGCAAGCTCGACGCCTATTTCGAGGGGAATCCTAACCCGGCGGATGACCTGCGGGTCCACAACCTCAGCAC GCCCTACGAGTTCGCCACACTCCTCGCGCACGAGTACCTGCGTCCCGGCCTGAGTCCGCGTGCTCTGGCGTGGCAGCACG AGGTCGCGGCGCTTGGCTTTGGCCGCTCGGCCCTGCGGGAGGAAGCCCTACACAACGTCGCGGTGTTCTACGGTAAGGGT GGCAACGGCTGGCGCATCCTCGCTTACACCGGCTACTTCCAAACCAAAGATGGCCACCACATCATCTACGCCTTGATGCA GCACGGCGCAAGCGAGACCTATACCATGCCGAACACGCGCCGTGCGTTTGCCTGGATCAATGCGGCCATCGACGCGGTGT TGCGTGCCAAAGCCGTGACGGAGGTGCAGGCGGTCACTCCCTGA
Upstream 100 bases:
>100_bases CTTTGAGGATCTGGGGGACCACTCGCTCGGCGCAGTGGTAGCGACGCACGCGGGACCAGGAACGGTTGGCGTGACGCTGG AACCGGTGACGGCCTGAACG
Downstream 100 bases:
>100_bases GACTTTACGGCGTCGTTTCTGCGCGGGCCAGTTCCGCCGCGATGGCCTGCTCCAGCCGGGGCCATACCTCGGCGTAGGGG AGAGGAATCGACGCGCCCGC
Product: beta-lactamase, putative
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 387; Mature: 386
Protein sequence:
>387_residues MATPPPALRNKGRYLLAALALAGGLWACRRPESAVPPAPAQASTAAVAPPTAHCLGPAPTVSPAPPPPLPLSGRLGLWVA EVDPVTLRSLRAVAENPNGVFPLASTYKQAVLWAVLQQFDAGTLLPTERFNVTRENQSLGKYPYDGTSIKDLTIRMIRNS DNTATDILHRRVGLKAVQAVADRLGLCHTRLILPTKAWWAAQAGLSNTFNGSDRWEAATGEERAQLAAAIDADAQKYRSD FLQRKLDAYFEGNPNPADDLRVHNLSTPYEFATLLAHEYLRPGLSPRALAWQHEVAALGFGRSALREEALHNVAVFYGKG GNGWRILAYTGYFQTKDGHHIIYALMQHGASETYTMPNTRRAFAWINAAIDAVLRAKAVTEVQAVTP
Sequences:
>Translated_387_residues MATPPPALRNKGRYLLAALALAGGLWACRRPESAVPPAPAQASTAAVAPPTAHCLGPAPTVSPAPPPPLPLSGRLGLWVA EVDPVTLRSLRAVAENPNGVFPLASTYKQAVLWAVLQQFDAGTLLPTERFNVTRENQSLGKYPYDGTSIKDLTIRMIRNS DNTATDILHRRVGLKAVQAVADRLGLCHTRLILPTKAWWAAQAGLSNTFNGSDRWEAATGEERAQLAAAIDADAQKYRSD FLQRKLDAYFEGNPNPADDLRVHNLSTPYEFATLLAHEYLRPGLSPRALAWQHEVAALGFGRSALREEALHNVAVFYGKG GNGWRILAYTGYFQTKDGHHIIYALMQHGASETYTMPNTRRAFAWINAAIDAVLRAKAVTEVQAVTP >Mature_386_residues ATPPPALRNKGRYLLAALALAGGLWACRRPESAVPPAPAQASTAAVAPPTAHCLGPAPTVSPAPPPPLPLSGRLGLWVAE VDPVTLRSLRAVAENPNGVFPLASTYKQAVLWAVLQQFDAGTLLPTERFNVTRENQSLGKYPYDGTSIKDLTIRMIRNSD NTATDILHRRVGLKAVQAVADRLGLCHTRLILPTKAWWAAQAGLSNTFNGSDRWEAATGEERAQLAAAIDADAQKYRSDF LQRKLDAYFEGNPNPADDLRVHNLSTPYEFATLLAHEYLRPGLSPRALAWQHEVAALGFGRSALREEALHNVAVFYGKGG NGWRILAYTGYFQTKDGHHIIYALMQHGASETYTMPNTRRAFAWINAAIDAVLRAKAVTEVQAVTP
Specific function: Unknown
COG id: COG2367
COG function: function code V; Beta-lactamase class A
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42067; Mature: 41936
Theoretical pI: Translated: 9.53; Mature: 9.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATPPPALRNKGRYLLAALALAGGLWACRRPESAVPPAPAQASTAAVAPPTAHCLGPAPT CCCCCHHHHCCCHHHHHHHHHHCCHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCC VSPAPPPPLPLSGRLGLWVAEVDPVTLRSLRAVAENPNGVFPLASTYKQAVLWAVLQQFD CCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCC AGTLLPTERFNVTRENQSLGKYPYDGTSIKDLTIRMIRNSDNTATDILHRRVGLKAVQAV CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHEEEEEEECCCCHHHHHHHHHHHHHHHHHH ADRLGLCHTRLILPTKAWWAAQAGLSNTFNGSDRWEAATGEERAQLAAAIDADAQKYRSD HHHHHHHHHEEEECCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH FLQRKLDAYFEGNPNPADDLRVHNLSTPYEFATLLAHEYLRPGLSPRALAWQHEVAALGF HHHHHHHHHCCCCCCCHHCEEEECCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCC GRSALREEALHNVAVFYGKGGNGWRILAYTGYFQTKDGHHIIYALMQHGASETYTMPNTR CHHHHHHHHHHCEEEEEECCCCCEEEEEEEEEEECCCCCHHHHHHHHCCCCCCEECCCCH RAFAWINAAIDAVLRAKAVTEVQAVTP HHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure ATPPPALRNKGRYLLAALALAGGLWACRRPESAVPPAPAQASTAAVAPPTAHCLGPAPT CCCCHHHHCCCHHHHHHHHHHCCHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCC VSPAPPPPLPLSGRLGLWVAEVDPVTLRSLRAVAENPNGVFPLASTYKQAVLWAVLQQFD CCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCC AGTLLPTERFNVTRENQSLGKYPYDGTSIKDLTIRMIRNSDNTATDILHRRVGLKAVQAV CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHEEEEEEECCCCHHHHHHHHHHHHHHHHHH ADRLGLCHTRLILPTKAWWAAQAGLSNTFNGSDRWEAATGEERAQLAAAIDADAQKYRSD HHHHHHHHHEEEECCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH FLQRKLDAYFEGNPNPADDLRVHNLSTPYEFATLLAHEYLRPGLSPRALAWQHEVAALGF HHHHHHHHHCCCCCCCHHCEEEECCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCC GRSALREEALHNVAVFYGKGGNGWRILAYTGYFQTKDGHHIIYALMQHGASETYTMPNTR CHHHHHHHHHHCEEEEEECCCCCEEEEEEEEEEECCCCCHHHHHHHHCCCCCCEECCCCH RAFAWINAAIDAVLRAKAVTEVQAVTP HHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA