| Definition | Deinococcus geothermalis DSM 11300, complete genome. |
|---|---|
| Accession | NC_008025 |
| Length | 2,467,205 |
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The map label for this gene is 94985329
Identifier: 94985329
GI number: 94985329
Start: 1307576
End: 1308262
Strand: Reverse
Name: 94985329
Synonym: Dgeo_1228
Alternate gene names: NA
Gene position: 1308262-1307576 (Counterclockwise)
Preceding gene: 94985330
Following gene: 94985328
Centisome position: 53.03
GC content: 68.7
Gene sequence:
>687_bases ATGAACAGTCTGCTGCGTTTCGTGCTGCCCGCTGCCGCCCTCGCACTGACGGCCTGCAGCCAGTCCTCGCCGCCCCAGGC GTCCGATCAGCCGCCCGTCACGGTCATCCAGGGCAAGGTGGCGACCTGGAGCGGAACGGGGACGGTCGGCGTGCCTGAGC TGAACGTCAGTGCCCCCGTGGGCACGGACGGCACCTTCACCCTCACCCTGCCTGGCGACGCGTCCCTGACGGGCCGGACC CGGGCAGCGGCCGACGTGATGACGTCCCTGAACTGCTCCGGCTCGCTGCAGAGCAGTCAGGCGGCGACGCTGGGGTTGGT GCTGACGGGCCTGAATGCCCGCGATGCCAGCGGGACGCGCCAACTGAGCGCTGTGGAGGGGGAAAAGACGGGACTGCTCA GCCGCCGCGTCCACGCCCGCGCCTGGCTCTATACTGACGGTGCCACGCAGCTGCGCGGCACCGTCAACTGTGCGGGGCTG CTGAACATTCCCGGGCTTAGCAACCTGCCTGTCGAGGTGGCTGTGAATACGCAGCGCGGCTGGAACGTCGTGGACCTGAA CCTCAACGTCAGCGCGAATGTCTTCGGCCAGCTCAGCGGCTCGGGCACCGCGGCCAACTCGACTGCTGGCAGCGCCACAA CGACCTGGCGAACGATGGCCGAACTGCAAGCGCAGCTCGGGTTCTGA
Upstream 100 bases:
>100_bases CGGGGCGGGTGCGGGGCCGGACCGTGATCGACGTGACCCGCTGAGCGCTGTGTTGCATTTCGTGTCCCGCGCGGGGACTA TCCCCTACATTGGGGCCGTC
Downstream 100 bases:
>100_bases GGCGCCGAGCGCAGCAGGCTTTCGCCATTCCGTCCACAGCAGAACGCGCGATCCTGAGGGGCCATGACCCCTTCCCTGTT CCCCAGCCACACCGACCAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 228; Mature: 228
Protein sequence:
>228_residues MNSLLRFVLPAAALALTACSQSSPPQASDQPPVTVIQGKVATWSGTGTVGVPELNVSAPVGTDGTFTLTLPGDASLTGRT RAAADVMTSLNCSGSLQSSQAATLGLVLTGLNARDASGTRQLSAVEGEKTGLLSRRVHARAWLYTDGATQLRGTVNCAGL LNIPGLSNLPVEVAVNTQRGWNVVDLNLNVSANVFGQLSGSGTAANSTAGSATTTWRTMAELQAQLGF
Sequences:
>Translated_228_residues MNSLLRFVLPAAALALTACSQSSPPQASDQPPVTVIQGKVATWSGTGTVGVPELNVSAPVGTDGTFTLTLPGDASLTGRT RAAADVMTSLNCSGSLQSSQAATLGLVLTGLNARDASGTRQLSAVEGEKTGLLSRRVHARAWLYTDGATQLRGTVNCAGL LNIPGLSNLPVEVAVNTQRGWNVVDLNLNVSANVFGQLSGSGTAANSTAGSATTTWRTMAELQAQLGF >Mature_228_residues MNSLLRFVLPAAALALTACSQSSPPQASDQPPVTVIQGKVATWSGTGTVGVPELNVSAPVGTDGTFTLTLPGDASLTGRT RAAADVMTSLNCSGSLQSSQAATLGLVLTGLNARDASGTRQLSAVEGEKTGLLSRRVHARAWLYTDGATQLRGTVNCAGL LNIPGLSNLPVEVAVNTQRGWNVVDLNLNVSANVFGQLSGSGTAANSTAGSATTTWRTMAELQAQLGF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23238; Mature: 23238
Theoretical pI: Translated: 8.05; Mature: 8.05
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSLLRFVLPAAALALTACSQSSPPQASDQPPVTVIQGKVATWSGTGTVGVPELNVSAPV CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECEEEEECCCCCCCCCCCCCCCCC GTDGTFTLTLPGDASLTGRTRAAADVMTSLNCSGSLQSSQAATLGLVLTGLNARDASGTR CCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCCCCCCCE QLSAVEGEKTGLLSRRVHARAWLYTDGATQLRGTVNCAGLLNIPGLSNLPVEVAVNTQRG EEEECCCCHHHHHHHEEEEEEEEEECCCHHCCEEEEEEEEEECCCCCCCCEEEEEECCCC WNVVDLNLNVSANVFGQLSGSGTAANSTAGSATTTWRTMAELQAQLGF CEEEEEEEEECEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure MNSLLRFVLPAAALALTACSQSSPPQASDQPPVTVIQGKVATWSGTGTVGVPELNVSAPV CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECEEEEECCCCCCCCCCCCCCCCC GTDGTFTLTLPGDASLTGRTRAAADVMTSLNCSGSLQSSQAATLGLVLTGLNARDASGTR CCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCCCCCCCE QLSAVEGEKTGLLSRRVHARAWLYTDGATQLRGTVNCAGLLNIPGLSNLPVEVAVNTQRG EEEECCCCHHHHHHHEEEEEEEEEECCCHHCCEEEEEEEEEECCCCCCCCEEEEEECCCC WNVVDLNLNVSANVFGQLSGSGTAANSTAGSATTTWRTMAELQAQLGF CEEEEEEEEECEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA