| Definition | Deinococcus geothermalis DSM 11300, complete genome. |
|---|---|
| Accession | NC_008025 |
| Length | 2,467,205 |
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The map label for this gene is yusP [H]
Identifier: 94985249
GI number: 94985249
Start: 1219060
End: 1221168
Strand: Reverse
Name: yusP [H]
Synonym: Dgeo_1147
Alternate gene names: 94985249
Gene position: 1221168-1219060 (Counterclockwise)
Preceding gene: 94985250
Following gene: 94985245
Centisome position: 49.5
GC content: 67.95
Gene sequence:
>2109_bases ATGACCGTACCCCACCCACCCGGCGCGCCCCCCCAGCGCATCAACTACGCGCAGACGCTGAGCCTCGCCACCAAGCGGGA AATCCTCTTCGGTGTGCTGCTGGGCCTCTTTCTGAGCGCGCTTGACCAAACCATCGTGGCGACCGCCATGCCGCGCATCG CTGCCGACCTCAACGGCCTGAACCTGTACGCTTGGGTCACGACGGCGTACCTGCTGACCAATACCGCCCTGGTGCCGATC TATGGCAAGCTCTCGGACCTGTACGGCCGCAAGCCCGTGCTGATGGTGGGCATCCTGATCTTTCTGCTTGGCTCGGCGCT GTGCGGTCTGTCGGGCGAAGCCTTTCTTGGGAACCTGTTCGGCGGCGGGATGATGCAGCTCGTCGTGTTCCGCGGTCTCC AAGGCATCGGTGCGGCGGCGCTCGGCTCGGTCGCCTTTGCCATCGTCGCGGACCTGTTCGAGCCGGCAGAGCGGCCCCGC TACCAGGGCCTCTTCGGCGCCGTGTTCGGTCTCTCAAGCGTGATCGGCCCGCTGCTGGGCGGCTTCCTCACCGACCAGAT TTCCTGGCGCTGGGTGTTCTACGTGAACCTGCCGCTGGGTCTGATCGCGCTCTCTTTTATCGCCAGCAAGATGCCCCGGC TGGCAAGCGGTCTCCAGGCGAAGGTGGACTGGCTGGGTGCTTTCCTGATTATCTTGTTCGCGGTGCCGCTGCTGCTTGCC CTGACCTGGGGTGCGGACAATACCTATGCCTGGACCAGTGCCACCATCCTGGGCCTCTTCGGCCTGAGTGCCGCCGCCCT GGTGGCGTTTCTGTTTGTAGAGAGCCGCCACCCCAGCCCGATCCTGCCCCTCACGCTGTTTCGCAACCCCACCTTCGGCT GGGGCGCGGTGGCCCGGTTCCTGATTGGGGCGGGCTTTTTGGGTGCGGTCCTGTTCCTGAGCCTGTACCTCGTGCAGGTC AAGGGCGTCAGCGCGACGCGGGCGGGGACCGCCACCATTCCGCTCACGGTGGGCCTGATCATCGGCTCGGTCGGCTCCGG GCAGATCGCCAGCCGCATCGGGCGCTACAAGCCGCTGATTCTGATTGGCCTGGTCGTGGCGGCCCTGGGCTTTTTCAGCC TCAGCACCCTCACCGCCGATACTCCCTACTCCGGCGTGATTCTGCGGATGGTTCTGCTGGGCTTGGGCCTCGGCCCCGCA CTGCCGCTCTACACCACCGCCCTGCAACTCGCCGTCAAGCCCTGGGAAATCGGCGTGGCGACCAGCGCCGGACAGTTCTT CCAGCAGATGGGAAGCACCATCGGCACCGCGATTTTCGGCGCGATGCTCACGGCGGGCTTGACCACCAACCTCGCCACCC AGTTTGCCGCCCAGGCCGCCGCGCAGCAGGGTACCGTCGCCACCACCCTCAAGACCATCAGCGAGCGCATCCGCAGCGGC GCTGCCGGGGGCAGCCAGGACCGCAACGCCGCGCCGCAATCGCCGGAGCAGATCCGCGCCACCTTCGCGACCCTGCGGCA GAACGTCACCCGGGCCATCGAGCGCGGTGACCCAGCCGCCATCGCGGCCATCCAGAAAGACCCGACCCTGCCCGCCGAGG CAAAGCAGCGCCTGGCAACTGTGCCTGCCGGGGGTGTGGCAGCAGGCGTGACTGCCGGGTTCAACCAGGTGTACGCGGCG ATCGCCGGAGCTGTGAACAGCGGCAACCCCGCGCAGGTCGCGGCCGTCGCCGCCAATCCGCAGCTGCCCGCGCCCCTGCG CCAGCGCCTCGCGCAGCTTCCGCCGCAGGCCCTCCAGAATCCGCAGGCCCGCACTCAGATTCTTGCGGGGATCAAGCAGG GCCTGGACGCCGCGGCCGCCGCTGCCGCCCAGCAGGCCCAGCAGCAGGCGCTGACGGCAGCGCTGCAGGGTGTGAATGAC GGAGAGCAGATCGCCCTTGCCAGTGCCCGCGCAACCAAGGTGGCCTTTGCCGAGACCATCGCCAGCATCTACCGCTCCTC CATCCTGGTGGCGCTGCTTGCCTTTCTCGCCACGCTGCTGATGCCCAACCTCCGCATGCCCACCCGCCAGCAGGGCGAGC GGCTGGCCCCGGTTCACGTGGAGGCGTAG
Upstream 100 bases:
>100_bases ATGTCGCGGCCTTTAGCAGCCTGCGGCCCGAGACCATTCGTGCAGCCACCACCTCGATTCGTGCCTTGCTGAACGAACTC GTTCCTTTCCAGGAGTCCCC
Downstream 100 bases:
>100_bases GCCGGAACGTCAAGGGGCGGGCGTGGCCATATCCACGCCCGCCCTTCTCAGCGCAGGTGTTTCTGTTCCCAGATCAGATC GCGCAGCACCCAGCCGCTGC
Product: EmrB/QacA family drug resistance transporter
Products: Proton [Cytoplasm]; drug [Periplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 702; Mature: 701
Protein sequence:
>702_residues MTVPHPPGAPPQRINYAQTLSLATKREILFGVLLGLFLSALDQTIVATAMPRIAADLNGLNLYAWVTTAYLLTNTALVPI YGKLSDLYGRKPVLMVGILIFLLGSALCGLSGEAFLGNLFGGGMMQLVVFRGLQGIGAAALGSVAFAIVADLFEPAERPR YQGLFGAVFGLSSVIGPLLGGFLTDQISWRWVFYVNLPLGLIALSFIASKMPRLASGLQAKVDWLGAFLIILFAVPLLLA LTWGADNTYAWTSATILGLFGLSAAALVAFLFVESRHPSPILPLTLFRNPTFGWGAVARFLIGAGFLGAVLFLSLYLVQV KGVSATRAGTATIPLTVGLIIGSVGSGQIASRIGRYKPLILIGLVVAALGFFSLSTLTADTPYSGVILRMVLLGLGLGPA LPLYTTALQLAVKPWEIGVATSAGQFFQQMGSTIGTAIFGAMLTAGLTTNLATQFAAQAAAQQGTVATTLKTISERIRSG AAGGSQDRNAAPQSPEQIRATFATLRQNVTRAIERGDPAAIAAIQKDPTLPAEAKQRLATVPAGGVAAGVTAGFNQVYAA IAGAVNSGNPAQVAAVAANPQLPAPLRQRLAQLPPQALQNPQARTQILAGIKQGLDAAAAAAAQQAQQQALTAALQGVND GEQIALASARATKVAFAETIASIYRSSILVALLAFLATLLMPNLRMPTRQQGERLAPVHVEA
Sequences:
>Translated_702_residues MTVPHPPGAPPQRINYAQTLSLATKREILFGVLLGLFLSALDQTIVATAMPRIAADLNGLNLYAWVTTAYLLTNTALVPI YGKLSDLYGRKPVLMVGILIFLLGSALCGLSGEAFLGNLFGGGMMQLVVFRGLQGIGAAALGSVAFAIVADLFEPAERPR YQGLFGAVFGLSSVIGPLLGGFLTDQISWRWVFYVNLPLGLIALSFIASKMPRLASGLQAKVDWLGAFLIILFAVPLLLA LTWGADNTYAWTSATILGLFGLSAAALVAFLFVESRHPSPILPLTLFRNPTFGWGAVARFLIGAGFLGAVLFLSLYLVQV KGVSATRAGTATIPLTVGLIIGSVGSGQIASRIGRYKPLILIGLVVAALGFFSLSTLTADTPYSGVILRMVLLGLGLGPA LPLYTTALQLAVKPWEIGVATSAGQFFQQMGSTIGTAIFGAMLTAGLTTNLATQFAAQAAAQQGTVATTLKTISERIRSG AAGGSQDRNAAPQSPEQIRATFATLRQNVTRAIERGDPAAIAAIQKDPTLPAEAKQRLATVPAGGVAAGVTAGFNQVYAA IAGAVNSGNPAQVAAVAANPQLPAPLRQRLAQLPPQALQNPQARTQILAGIKQGLDAAAAAAAQQAQQQALTAALQGVND GEQIALASARATKVAFAETIASIYRSSILVALLAFLATLLMPNLRMPTRQQGERLAPVHVEA >Mature_701_residues TVPHPPGAPPQRINYAQTLSLATKREILFGVLLGLFLSALDQTIVATAMPRIAADLNGLNLYAWVTTAYLLTNTALVPIY GKLSDLYGRKPVLMVGILIFLLGSALCGLSGEAFLGNLFGGGMMQLVVFRGLQGIGAAALGSVAFAIVADLFEPAERPRY QGLFGAVFGLSSVIGPLLGGFLTDQISWRWVFYVNLPLGLIALSFIASKMPRLASGLQAKVDWLGAFLIILFAVPLLLAL TWGADNTYAWTSATILGLFGLSAAALVAFLFVESRHPSPILPLTLFRNPTFGWGAVARFLIGAGFLGAVLFLSLYLVQVK GVSATRAGTATIPLTVGLIIGSVGSGQIASRIGRYKPLILIGLVVAALGFFSLSTLTADTPYSGVILRMVLLGLGLGPAL PLYTTALQLAVKPWEIGVATSAGQFFQQMGSTIGTAIFGAMLTAGLTTNLATQFAAQAAAQQGTVATTLKTISERIRSGA AGGSQDRNAAPQSPEQIRATFATLRQNVTRAIERGDPAAIAAIQKDPTLPAEAKQRLATVPAGGVAAGVTAGFNQVYAAI AGAVNSGNPAQVAAVAANPQLPAPLRQRLAQLPPQALQNPQARTQILAGIKQGLDAAAAAAAQQAQQQALTAALQGVNDG EQIALASARATKVAFAETIASIYRSSILVALLAFLATLLMPNLRMPTRQQGERLAPVHVEA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. EmrB family [H]
Homologues:
Organism=Escherichia coli, GI1790195, Length=349, Percent_Identity=31.2320916905444, Blast_Score=119, Evalue=7e-28, Organism=Escherichia coli, GI1789042, Length=415, Percent_Identity=25.3012048192771, Blast_Score=115, Evalue=1e-26, Organism=Escherichia coli, GI1788710, Length=408, Percent_Identity=25.4901960784314, Blast_Score=103, Evalue=3e-23, Organism=Escherichia coli, GI87081983, Length=390, Percent_Identity=26.9230769230769, Blast_Score=100, Evalue=5e-22, Organism=Escherichia coli, GI1788392, Length=365, Percent_Identity=29.8630136986301, Blast_Score=82, Evalue=1e-16, Organism=Escherichia coli, GI1790146, Length=173, Percent_Identity=30.635838150289, Blast_Score=69, Evalue=1e-12, Organism=Escherichia coli, GI48994889, Length=114, Percent_Identity=35.9649122807018, Blast_Score=66, Evalue=8e-12, Organism=Saccharomyces cerevisiae, GI6322958, Length=463, Percent_Identity=27.2138228941685, Blast_Score=139, Evalue=2e-33, Organism=Saccharomyces cerevisiae, GI6323735, Length=337, Percent_Identity=28.486646884273, Blast_Score=118, Evalue=3e-27, Organism=Saccharomyces cerevisiae, GI6321663, Length=385, Percent_Identity=25.1948051948052, Blast_Score=111, Evalue=4e-25, Organism=Saccharomyces cerevisiae, GI6319783, Length=372, Percent_Identity=26.6129032258064, Blast_Score=106, Evalue=1e-23, Organism=Saccharomyces cerevisiae, GI6319770, Length=391, Percent_Identity=26.0869565217391, Blast_Score=86, Evalue=1e-17, Organism=Saccharomyces cerevisiae, GI6325455, Length=405, Percent_Identity=22.4691358024691, Blast_Score=76, Evalue=2e-14, Organism=Saccharomyces cerevisiae, GI6323520, Length=261, Percent_Identity=24.1379310344828, Blast_Score=64, Evalue=6e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004638 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR005829 - InterPro: IPR001411 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 73018; Mature: 72887
Theoretical pI: Translated: 10.60; Mature: 10.60
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVPHPPGAPPQRINYAQTLSLATKREILFGVLLGLFLSALDQTIVATAMPRIAADLNGL CCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC NLYAWVTTAYLLTNTALVPIYGKLSDLYGRKPVLMVGILIFLLGSALCGLSGEAFLGNLF CHHHHHHHHHHHHCCCCEEHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHH GGGMMQLVVFRGLQGIGAAALGSVAFAIVADLFEPAERPRYQGLFGAVFGLSSVIGPLLG CCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH GFLTDQISWRWVFYVNLPLGLIALSFIASKMPRLASGLQAKVDWLGAFLIILFAVPLLLA HHHHHCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LTWGADNTYAWTSATILGLFGLSAAALVAFLFVESRHPSPILPLTLFRNPTFGWGAVARF HHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHH LIGAGFLGAVLFLSLYLVQVKGVSATRAGTATIPLTVGLIIGSVGSGQIASRIGRYKPLI HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHCCCCHHH LIGLVVAALGFFSLSTLTADTPYSGVILRMVLLGLGLGPALPLYTTALQLAVKPWEIGVA HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHCCCC TSAGQFFQQMGSTIGTAIFGAMLTAGLTTNLATQFAAQAAAQQGTVATTLKTISERIRSG CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCC AAGGSQDRNAAPQSPEQIRATFATLRQNVTRAIERGDPAAIAAIQKDPTLPAEAKQRLAT CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHC VPAGGVAAGVTAGFNQVYAAIAGAVNSGNPAQVAAVAANPQLPAPLRQRLAQLPPQALQN CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHHCCHHHHCC PQARTQILAGIKQGLDAAAAAAAQQAQQQALTAALQGVNDGEQIALASARATKVAFAETI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHH ASIYRSSILVALLAFLATLLMPNLRMPTRQQGERLAPVHVEA HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCEEECC >Mature Secondary Structure TVPHPPGAPPQRINYAQTLSLATKREILFGVLLGLFLSALDQTIVATAMPRIAADLNGL CCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC NLYAWVTTAYLLTNTALVPIYGKLSDLYGRKPVLMVGILIFLLGSALCGLSGEAFLGNLF CHHHHHHHHHHHHCCCCEEHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHH GGGMMQLVVFRGLQGIGAAALGSVAFAIVADLFEPAERPRYQGLFGAVFGLSSVIGPLLG CCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH GFLTDQISWRWVFYVNLPLGLIALSFIASKMPRLASGLQAKVDWLGAFLIILFAVPLLLA HHHHHCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LTWGADNTYAWTSATILGLFGLSAAALVAFLFVESRHPSPILPLTLFRNPTFGWGAVARF HHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHH LIGAGFLGAVLFLSLYLVQVKGVSATRAGTATIPLTVGLIIGSVGSGQIASRIGRYKPLI HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHCCCCHHH LIGLVVAALGFFSLSTLTADTPYSGVILRMVLLGLGLGPALPLYTTALQLAVKPWEIGVA HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHCCCC TSAGQFFQQMGSTIGTAIFGAMLTAGLTTNLATQFAAQAAAQQGTVATTLKTISERIRSG CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCC AAGGSQDRNAAPQSPEQIRATFATLRQNVTRAIERGDPAAIAAIQKDPTLPAEAKQRLAT CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHC VPAGGVAAGVTAGFNQVYAAIAGAVNSGNPAQVAAVAANPQLPAPLRQRLAQLPPQALQN CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHHCCHHHHCC PQARTQILAGIKQGLDAAAAAAAQQAQQQALTAALQGVNDGEQIALASARATKVAFAETI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHH ASIYRSSILVALLAFLATLLMPNLRMPTRQQGERLAPVHVEA HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; drug [Cytoplasm] [C]
Specific reaction: Proton [Periplasm] + drug [Cytoplasm] = Proton [Cytoplasm] + drug [Periplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]