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The map label for this gene is yobA [C]

Identifier: 94985232

GI number: 94985232

Start: 1201062

End: 1201460

Strand: Reverse

Name: yobA [C]

Synonym: Dgeo_1130

Alternate gene names: 94985232

Gene position: 1201460-1201062 (Counterclockwise)

Preceding gene: 94985233

Following gene: 94985231

Centisome position: 48.7

GC content: 68.17

Gene sequence:

>399_bases
ATGCGTTTCCTGCTTGCCTTGCTCGCCGCCCTGTCACTGGGGGCCGCGTTTGCCCATACCCAGGTCACCGCCGTGACGCC
TCGCGCACATGCCCGGGTGACGGCGCCCAAAACCGTCACGCTGACGTTTGACGAGCCCATCAACCTGCGCTTTGCGACCT
TCAAGGTCGTGCCGCTGCCGGCCGGCGCGGATGTGGAGCAAACGGCTGCAGCAGCTCTGGCGCGCCGCGATGATGCCGCG
CTCCGCGCCGACACAGCGCCTGCCTTGAGCGGGATGGCCGCCCGGGTTCAACTGCCGCTCCACGCAGGGCTGAAACCCGG
CGCCTATCTCATCGTCTGGCGCGTGGTCTCGGACGACGGCCATCCGGTGAGCGGGCATTCCGTCTTCTGGGTGCAGTGA

Upstream 100 bases:

>100_bases
GACGACACCGACCCTGAGCAGGCACCCGCCAGCAAGACCACCGTCAAGTAAAGAATGAGGGGGGAGAGGCCGCTGCGCCC
TCCCCCCGGAAAGGACGCCT

Downstream 100 bases:

>100_bases
GCACATGCTGCCCGCCCTGGCCGCGGCTGGATTTGTGACGGCGCTGGGGACGCTGCTGCTGGTCGGGGGCAGCTTTGCCC
GCCGCGCGCTCACGCTTGGA

Product: copper resistance protein CopC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 132; Mature: 132

Protein sequence:

>132_residues
MRFLLALLAALSLGAAFAHTQVTAVTPRAHARVTAPKTVTLTFDEPINLRFATFKVVPLPAGADVEQTAAAALARRDDAA
LRADTAPALSGMAARVQLPLHAGLKPGAYLIVWRVVSDDGHPVSGHSVFWVQ

Sequences:

>Translated_132_residues
MRFLLALLAALSLGAAFAHTQVTAVTPRAHARVTAPKTVTLTFDEPINLRFATFKVVPLPAGADVEQTAAAALARRDDAA
LRADTAPALSGMAARVQLPLHAGLKPGAYLIVWRVVSDDGHPVSGHSVFWVQ
>Mature_132_residues
MRFLLALLAALSLGAAFAHTQVTAVTPRAHARVTAPKTVTLTFDEPINLRFATFKVVPLPAGADVEQTAAAALARRDDAA
LRADTAPALSGMAARVQLPLHAGLKPGAYLIVWRVVSDDGHPVSGHSVFWVQ

Specific function: Unknown

COG id: COG2372

COG function: function code R; Uncharacterized protein, homolog of Cu resistance protein CopC

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13929; Mature: 13929

Theoretical pI: Translated: 10.59; Mature: 10.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFLLALLAALSLGAAFAHTQVTAVTPRAHARVTAPKTVTLTFDEPINLRFATFKVVPLP
CHHHHHHHHHHHHCCHHHCCEEEEECCCCCEEEECCCEEEEEECCCCCEEEEEEEEEECC
AGADVEQTAAAALARRDDAALRADTAPALSGMAARVQLPLHAGLKPGAYLIVWRVVSDDG
CCCCHHHHHHHHHHCCCCCCEECCCCCCCCCCEEEEEEEECCCCCCCEEEEEEEEECCCC
HPVSGHSVFWVQ
CCCCCCEEEEEC
>Mature Secondary Structure
MRFLLALLAALSLGAAFAHTQVTAVTPRAHARVTAPKTVTLTFDEPINLRFATFKVVPLP
CHHHHHHHHHHHHCCHHHCCEEEEECCCCCEEEECCCEEEEEECCCCCEEEEEEEEEECC
AGADVEQTAAAALARRDDAALRADTAPALSGMAARVQLPLHAGLKPGAYLIVWRVVSDDG
CCCCHHHHHHHHHHCCCCCCEECCCCCCCCCCEEEEEEEECCCCCCCEEEEEEEEECCCC
HPVSGHSVFWVQ
CCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Cu [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA