| Definition | Deinococcus geothermalis DSM 11300, complete genome. |
|---|---|
| Accession | NC_008025 |
| Length | 2,467,205 |
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The map label for this gene is 94985116
Identifier: 94985116
GI number: 94985116
Start: 1082896
End: 1084386
Strand: Reverse
Name: 94985116
Synonym: Dgeo_1011
Alternate gene names: NA
Gene position: 1084386-1082896 (Counterclockwise)
Preceding gene: 94985117
Following gene: 94985115
Centisome position: 43.95
GC content: 68.14
Gene sequence:
>1491_bases ATGGGCCGCTCTCTCCGCTCTCCCCTCCGTCCCCTGCTGCTCCTCGCAGGCCTGACCATCCCGGGTTTGGCCGGTGCCAG CGAGTTTCCGGTAGGACTGGGTACCGTTCTTCCGGCGGCTCCCCTGAACGCGGCGACCTTCAGCTGCCCCACGCCCACCG ATCCGCTGGAGCTGGCGCTGTGGCAGGTGACCACCGAGGGAGGGCGGCCCGACCACTCCTGCGGCAACACATTTGTGAGC TACCTGCGAACCCCGCGCACCCCGCAGCAACCCGATGCCTTCGATGAGACAGCGGAGCAGGTGCGCGGAGCACGGGCCGA GGTGCTGCTCGCCAGCATGGAGTGGCAGGCGGGCGAGGGGCATCCGGGGTGGACCTTTGCAGAGGCCGTGCGCGACCTGT ACGCCAAGGTCCAGGCGGATCCGGCGGCCTATCCCGAGGGCATGACGGTGCGCGTCTCACTGGGCGGCTACCCGGACCTG AAACGGTCAGACGGCGGTACCCAGGCCCTCGAACTTGTGCGCGACCTCACGCGGCTGGGTGTACCCTTTAACAACCCTGC AGTGGGCTGGCACCTCGCGGTTGCCAACTACAGGTATTTTCCACACAGCCACGCCAAACTGCATATCATCGACGGCCAGG ATCTGACGGTGGCCGGATACAACTACACAGATGTTCACCTCCCCGACACGCTGCCGGGCGGACGGAGTCTCCACGACCTG GGCCTGCGGATGCGCGGCCCGGTCGCCCAGGATGGGGTGGCCGTTTTCGACGACCTGTGGCGACACTCGCAGGAGGTGAC CTGCCCGGCAGACACGGCGGCGGAGGCGGTCATGCGGCTCTGCACCCTCATCCCGGCGAAGGCGCCGACCCACCCGGCCT TGGCCCGCACCTTGACGCCCGCCGGGGACGCGCGGGCCTTCCTGCTGTACCGCCGTCCCGGCTTCGACCAAGCCGACCGA GCGGAGGTGGCCCTCTTCGGGGCGGCGCGCCAGAGCCTCGACCTGATGCAGGTGGAGTTCAGCCCCAGCCTGAAGTGCTG GTTTGCCTACCTCAACCCCGATGACTGCCCCGTCTCGGACTGGCCCCCATACTTCCGCGCGATCCTGGAGGCAATGCAAC GCGGCGTGCGGGTCCGCGCCTTGATGGTGAACTATGGTCTGGACCAGATCGCCAACCGCAGTGGCGTGGCGCTGATGCGG CTGGCGGCGCGGCGCCTCGGGATTGAGGACCGCTTCGAGGCCCGCGCCGTCACCTTCAACATGCACACCAAGGCAATGAC GGTAGATGGCCGGATGGTGTTGGCAGGCAGTCAGAACCTCCACTTCTCGGCGTGGGGACCCTTGGGCCTGAACGAGGCGA TGCTCGCCACGACCGACCCGCAGGCGGTGGCCGAGCAGCGTGCCAGTTTTGAGGACGTGTGGGCCCACCACAGCCGCGCG CTGCCGCAAGAGTGGTGGATGCGGAACGTGGAGGAGGGACCGCAGCACTGA
Upstream 100 bases:
>100_bases CTTCACCGTGGTGGACTGAGCTTCTGCCCCTCAAAGCTTCACGGTCCATCAGGAAGCCTCATGCTTCGCGTCAGCGTGGC GGGCCTATCTTGCTGGGGCG
Downstream 100 bases:
>100_bases CTGTACGGGACTTCTCGCACCCTCCGGCCGGGCCTTCCCACCTACACTAGGGAGGTGACGGGAGCCACCATGGTTGAACG GATTCATCTTGCCAAGCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 496; Mature: 495
Protein sequence:
>496_residues MGRSLRSPLRPLLLLAGLTIPGLAGASEFPVGLGTVLPAAPLNAATFSCPTPTDPLELALWQVTTEGGRPDHSCGNTFVS YLRTPRTPQQPDAFDETAEQVRGARAEVLLASMEWQAGEGHPGWTFAEAVRDLYAKVQADPAAYPEGMTVRVSLGGYPDL KRSDGGTQALELVRDLTRLGVPFNNPAVGWHLAVANYRYFPHSHAKLHIIDGQDLTVAGYNYTDVHLPDTLPGGRSLHDL GLRMRGPVAQDGVAVFDDLWRHSQEVTCPADTAAEAVMRLCTLIPAKAPTHPALARTLTPAGDARAFLLYRRPGFDQADR AEVALFGAARQSLDLMQVEFSPSLKCWFAYLNPDDCPVSDWPPYFRAILEAMQRGVRVRALMVNYGLDQIANRSGVALMR LAARRLGIEDRFEARAVTFNMHTKAMTVDGRMVLAGSQNLHFSAWGPLGLNEAMLATTDPQAVAEQRASFEDVWAHHSRA LPQEWWMRNVEEGPQH
Sequences:
>Translated_496_residues MGRSLRSPLRPLLLLAGLTIPGLAGASEFPVGLGTVLPAAPLNAATFSCPTPTDPLELALWQVTTEGGRPDHSCGNTFVS YLRTPRTPQQPDAFDETAEQVRGARAEVLLASMEWQAGEGHPGWTFAEAVRDLYAKVQADPAAYPEGMTVRVSLGGYPDL KRSDGGTQALELVRDLTRLGVPFNNPAVGWHLAVANYRYFPHSHAKLHIIDGQDLTVAGYNYTDVHLPDTLPGGRSLHDL GLRMRGPVAQDGVAVFDDLWRHSQEVTCPADTAAEAVMRLCTLIPAKAPTHPALARTLTPAGDARAFLLYRRPGFDQADR AEVALFGAARQSLDLMQVEFSPSLKCWFAYLNPDDCPVSDWPPYFRAILEAMQRGVRVRALMVNYGLDQIANRSGVALMR LAARRLGIEDRFEARAVTFNMHTKAMTVDGRMVLAGSQNLHFSAWGPLGLNEAMLATTDPQAVAEQRASFEDVWAHHSRA LPQEWWMRNVEEGPQH >Mature_495_residues GRSLRSPLRPLLLLAGLTIPGLAGASEFPVGLGTVLPAAPLNAATFSCPTPTDPLELALWQVTTEGGRPDHSCGNTFVSY LRTPRTPQQPDAFDETAEQVRGARAEVLLASMEWQAGEGHPGWTFAEAVRDLYAKVQADPAAYPEGMTVRVSLGGYPDLK RSDGGTQALELVRDLTRLGVPFNNPAVGWHLAVANYRYFPHSHAKLHIIDGQDLTVAGYNYTDVHLPDTLPGGRSLHDLG LRMRGPVAQDGVAVFDDLWRHSQEVTCPADTAAEAVMRLCTLIPAKAPTHPALARTLTPAGDARAFLLYRRPGFDQADRA EVALFGAARQSLDLMQVEFSPSLKCWFAYLNPDDCPVSDWPPYFRAILEAMQRGVRVRALMVNYGLDQIANRSGVALMRL AARRLGIEDRFEARAVTFNMHTKAMTVDGRMVLAGSQNLHFSAWGPLGLNEAMLATTDPQAVAEQRASFEDVWAHHSRAL PQEWWMRNVEEGPQH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54369; Mature: 54238
Theoretical pI: Translated: 6.35; Mature: 6.35
Prosite motif: PS50035 PLD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRSLRSPLRPLLLLAGLTIPGLAGASEFPVGLGTVLPAAPLNAATFSCPTPTDPLELAL CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCCCCCCEECCCCCCCHHHEEE WQVTTEGGRPDHSCGNTFVSYLRTPRTPQQPDAFDETAEQVRGARAEVLLASMEWQAGEG EEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCEEEEEEECCCCCCCC HPGWTFAEAVRDLYAKVQADPAAYPEGMTVRVSLGGYPDLKRSDGGTQALELVRDLTRLG CCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHC VPFNNPAVGWHLAVANYRYFPHSHAKLHIIDGQDLTVAGYNYTDVHLPDTLPGGRSLHDL CCCCCCCCEEEEEEEEEEECCCCCCEEEEECCCEEEEECCCEEEEECCCCCCCCCCHHHC GLRMRGPVAQDGVAVFDDLWRHSQEVTCPADTAAEAVMRLCTLIPAKAPTHPALARTLTP CCEECCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHCCC AGDARAFLLYRRPGFDQADRAEVALFGAARQSLDLMQVEFSPSLKCWFAYLNPDDCPVSD CCCCEEEEEEECCCCCCCCCCCEEEEHHHHHCCEEEEEECCCCEEEEEEEECCCCCCCCC WPPYFRAILEAMQRGVRVRALMVNYGLDQIANRSGVALMRLAARRLGIEDRFEARAVTFN CCHHHHHHHHHHHCCCEEEEEEECCCHHHHCCCCCHHHHHHHHHHCCCCCCCCCEEEEEE MHTKAMTVDGRMVLAGSQNLHFSAWGPLGLNEAMLATTDPQAVAEQRASFEDVWAHHSRA ECEEEEEECCEEEEECCCCCEEEECCCCCCCCCEEECCCHHHHHHHHCCHHHHHHHHHCC LPQEWWMRNVEEGPQH CCHHHHHHCCCCCCCC >Mature Secondary Structure GRSLRSPLRPLLLLAGLTIPGLAGASEFPVGLGTVLPAAPLNAATFSCPTPTDPLELAL CCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCCCCCCEECCCCCCCHHHEEE WQVTTEGGRPDHSCGNTFVSYLRTPRTPQQPDAFDETAEQVRGARAEVLLASMEWQAGEG EEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCEEEEEEECCCCCCCC HPGWTFAEAVRDLYAKVQADPAAYPEGMTVRVSLGGYPDLKRSDGGTQALELVRDLTRLG CCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHC VPFNNPAVGWHLAVANYRYFPHSHAKLHIIDGQDLTVAGYNYTDVHLPDTLPGGRSLHDL CCCCCCCCEEEEEEEEEEECCCCCCEEEEECCCEEEEECCCEEEEECCCCCCCCCCHHHC GLRMRGPVAQDGVAVFDDLWRHSQEVTCPADTAAEAVMRLCTLIPAKAPTHPALARTLTP CCEECCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHCCC AGDARAFLLYRRPGFDQADRAEVALFGAARQSLDLMQVEFSPSLKCWFAYLNPDDCPVSD CCCCEEEEEEECCCCCCCCCCCEEEEHHHHHCCEEEEEECCCCEEEEEEEECCCCCCCCC WPPYFRAILEAMQRGVRVRALMVNYGLDQIANRSGVALMRLAARRLGIEDRFEARAVTFN CCHHHHHHHHHHHCCCEEEEEEECCCHHHHCCCCCHHHHHHHHHHCCCCCCCCCEEEEEE MHTKAMTVDGRMVLAGSQNLHFSAWGPLGLNEAMLATTDPQAVAEQRASFEDVWAHHSRA ECEEEEEECCEEEEECCCCCEEEECCCCCCCCCEEECCCHHHHHHHHCCHHHHHHHHHCC LPQEWWMRNVEEGPQH CCHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA