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The map label for this gene is pspA [C]

Identifier: 94985101

GI number: 94985101

Start: 1069615

End: 1070328

Strand: Reverse

Name: pspA [C]

Synonym: Dgeo_0996

Alternate gene names: 94985101

Gene position: 1070328-1069615 (Counterclockwise)

Preceding gene: 94985102

Following gene: 94985100

Centisome position: 43.38

GC content: 64.15

Gene sequence:

>714_bases
GTGCGTAATCATGCACGCGAGGAGGAACACCCCATGAGTATTCTCGACCGTCTTTCCCGACTGCTTCGCGCCAATGTCAA
CGACCTGATCAGCAAGGCCGAAGACCCCGCCAAGATCATCGACCAAGCCCTACGCGACATGCGCGCGGCCTACAGCGACG
CCCGCGCCGAGGTGGCCGACGCGATGAGCCAGAGTGCTCGCTTGGAGCGCGAGGCGAGCACCAACCGCAAGCTCGCGGAC
GAATACGAGAAGAAAGCCGAAGAGGCCCTGCGCGGCGGCAGCGAGGAGCTGGCCCGCGAGGCGCTGCGCCGCGCCCAGAA
TCACAAGGACCTTGCCAAAGGCTTTGAGGAACAGGTCGCTGTGCAAAACAGCACCGTCGACCAGCTCAAGACCCAGCTGC
GCGCCCTGGAAGCCAAGATCGACGAGATGGAATCCAAGCGCACCCTGCTGGCGGCCCGACAAAAGACGGCACAGGCCGGA
GCGACCCTCGACCGCGTCAGCGGCTTTTCCAAGGCGGGGGGCGCTATGGACGCCTTTGAAGAGATGGAACGCAAGGTGGC
CAGCATGGAAGACCGCAACAAGGCCATGACCGAGCTGCGCCAAGAAAACGACATTGATGCCCAGCTGCGCGACCTAGGCC
GCGACCGCGAACTCGATGAGGCGTTCGCCGCCCTCAAGGCGCGGGTACAGGGCAGCGGCGATCAGCAGAGCTAA

Upstream 100 bases:

>100_bases
GGACCTCGCCCAAGGTGCTTTCCCGCGTCCTTGTTCTGGGTCCTTGGGTGCCTTGGCCCCTTGAGCTGGCCTTCAGGGTT
GGGAACCGGAGGCAGGGTGA

Downstream 100 bases:

>100_bases
GAACTCCGCAGGAAGAGGCGCCCGAAGCCGGCGTCAGGGGCGTGAAAGCGCCCTTTTTTCATACGTCTGATGTCACGCCC
CACCCCACCATCCGTCCCAT

Product: phage shock protein A, PspA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 237; Mature: 237

Protein sequence:

>237_residues
MRNHAREEEHPMSILDRLSRLLRANVNDLISKAEDPAKIIDQALRDMRAAYSDARAEVADAMSQSARLEREASTNRKLAD
EYEKKAEEALRGGSEELAREALRRAQNHKDLAKGFEEQVAVQNSTVDQLKTQLRALEAKIDEMESKRTLLAARQKTAQAG
ATLDRVSGFSKAGGAMDAFEEMERKVASMEDRNKAMTELRQENDIDAQLRDLGRDRELDEAFAALKARVQGSGDQQS

Sequences:

>Translated_237_residues
MRNHAREEEHPMSILDRLSRLLRANVNDLISKAEDPAKIIDQALRDMRAAYSDARAEVADAMSQSARLEREASTNRKLAD
EYEKKAEEALRGGSEELAREALRRAQNHKDLAKGFEEQVAVQNSTVDQLKTQLRALEAKIDEMESKRTLLAARQKTAQAG
ATLDRVSGFSKAGGAMDAFEEMERKVASMEDRNKAMTELRQENDIDAQLRDLGRDRELDEAFAALKARVQGSGDQQS
>Mature_237_residues
MRNHAREEEHPMSILDRLSRLLRANVNDLISKAEDPAKIIDQALRDMRAAYSDARAEVADAMSQSARLEREASTNRKLAD
EYEKKAEEALRGGSEELAREALRRAQNHKDLAKGFEEQVAVQNSTVDQLKTQLRALEAKIDEMESKRTLLAARQKTAQAG
ATLDRVSGFSKAGGAMDAFEEMERKVASMEDRNKAMTELRQENDIDAQLRDLGRDRELDEAFAALKARVQGSGDQQS

Specific function: The Phage Shock Protein (Psp) Operon (Pspabce) May Play A Significant Role In The Competition For Survival Under Nutrient- Or Energy-Limited Conditions. Pspa Has A Role As A Negative Regulator, Is Required For Efficient Translocation And Has An Unknown Fu

COG id: COG1842

COG function: function code KT; Phage shock protein A (IM30), suppresses sigma54-dependent transcription

Gene ontology:

Cell location: Inner Membrane-Associated [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PspA/IM30 family [H]

Homologues:

Organism=Escherichia coli, GI2367118, Length=218, Percent_Identity=30.7339449541284, Blast_Score=86, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007157 [H]

Pfam domain/function: PF04012 PspA_IM30 [H]

EC number: NA

Molecular weight: Translated: 26558; Mature: 26558

Theoretical pI: Translated: 5.17; Mature: 5.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNHAREEEHPMSILDRLSRLLRANVNDLISKAEDPAKIIDQALRDMRAAYSDARAEVAD
CCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
AMSQSARLEREASTNRKLADEYEKKAEEALRGGSEELAREALRRAQNHKDLAKGFEEQVA
HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
VQNSTVDQLKTQLRALEAKIDEMESKRTLLAARQKTAQAGATLDRVSGFSKAGGAMDAFE
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCHHHCCCHHHHHH
EMERKVASMEDRNKAMTELRQENDIDAQLRDLGRDRELDEAFAALKARVQGSGDQQS
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MRNHAREEEHPMSILDRLSRLLRANVNDLISKAEDPAKIIDQALRDMRAAYSDARAEVAD
CCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
AMSQSARLEREASTNRKLADEYEKKAEEALRGGSEELAREALRRAQNHKDLAKGFEEQVA
HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
VQNSTVDQLKTQLRALEAKIDEMESKRTLLAARQKTAQAGATLDRVSGFSKAGGAMDAFE
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCHHHCCCHHHHHH
EMERKVASMEDRNKAMTELRQENDIDAQLRDLGRDRELDEAFAALKARVQGSGDQQS
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10567266 [H]