Definition Deinococcus geothermalis DSM 11300, complete genome.
Accession NC_008025
Length 2,467,205

Click here to switch to the map view.

The map label for this gene is 94985100

Identifier: 94985100

GI number: 94985100

Start: 1068776

End: 1069573

Strand: Reverse

Name: 94985100

Synonym: Dgeo_0995

Alternate gene names: NA

Gene position: 1069573-1068776 (Counterclockwise)

Preceding gene: 94985101

Following gene: 94985099

Centisome position: 43.35

GC content: 66.67

Gene sequence:

>798_bases
GTGAAAGCGCCCTTTTTTCATACGTCTGATGTCACGCCCCACCCCACCATCCGTCCCATGCATCCGTCCAACTTCAGCAA
TGCTGACAGAATAGAGCCGATGTCGCGCTTTACCCTAAATCCCATGCGAGGCCGCGCCACCCTGCTTGCCGTGCCCCTGC
TGACCCTGCTGGGGGCTTGCGCGCCCACCGCGACCAAGACGGTCACGGCGCCGGTGCAGGCCAGCATCAGCGTGAGCAGC
GTGTCCTTTTATCCCCGCGAGACGGGATTGAGCTGGACCTATCTACCGGAAGGCGAGGCGGCGGGCGGCCTGCCGTACAC
GTTGCGCGCGCTCGGCCCCACCATGTTTGCGGGGCAACCCGCCCTGGCCTTTGAGCTGACCGGTCGCGGCGCCGACCAGA
CCTGGTACCGACAGGTGAGCGCGTCGGGCGTGCAGCTCCTCGGCTTTCGCAAGCCCGGCGTCACGGCCCGCCTCGAACCG
GCCTGGACCGAAGCCCCCGCCGAGGGCGCCTGGCGGGTAGGCCTGAGCTGGGAAGGCCAGAGCCGCCTCACGCTGACGAG
TGACGACGGCCGGGTACAGGCGCAGGGCACCCTGCGCTACCGCTACGACGTACAGGACCGCCGCCGTGTAACCACGCCTG
CCGGAAGTTTTGACGTGTGGGTGGTGACGCGCCAGATCCGTGACGATGTCGGGGGGCTGTTCCCACAGGCACAGCAGCTC
TGGTTTACACCCTTTGTGGGCGACGTGCGGACGCCTGAAGGCTTACTGCTCACCGGGCGCAACTTTGGTGGGAAGTAA

Upstream 100 bases:

>100_bases
ATGAGGCGTTCGCCGCCCTCAAGGCGCGGGTACAGGGCAGCGGCGATCAGCAGAGCTAAGAACTCCGCAGGAAGAGGCGC
CCGAAGCCGGCGTCAGGGGC

Downstream 100 bases:

>100_bases
GCATGCCGACCTTCCGCTACCCTGGGGGGATGACCCTCGCCGCCCCCTCTTCGACCTCTCCGGGAGGCCAGCCATGAGTG
AGCCAACTGCCAACCTCCAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 265; Mature: 265

Protein sequence:

>265_residues
MKAPFFHTSDVTPHPTIRPMHPSNFSNADRIEPMSRFTLNPMRGRATLLAVPLLTLLGACAPTATKTVTAPVQASISVSS
VSFYPRETGLSWTYLPEGEAAGGLPYTLRALGPTMFAGQPALAFELTGRGADQTWYRQVSASGVQLLGFRKPGVTARLEP
AWTEAPAEGAWRVGLSWEGQSRLTLTSDDGRVQAQGTLRYRYDVQDRRRVTTPAGSFDVWVVTRQIRDDVGGLFPQAQQL
WFTPFVGDVRTPEGLLLTGRNFGGK

Sequences:

>Translated_265_residues
MKAPFFHTSDVTPHPTIRPMHPSNFSNADRIEPMSRFTLNPMRGRATLLAVPLLTLLGACAPTATKTVTAPVQASISVSS
VSFYPRETGLSWTYLPEGEAAGGLPYTLRALGPTMFAGQPALAFELTGRGADQTWYRQVSASGVQLLGFRKPGVTARLEP
AWTEAPAEGAWRVGLSWEGQSRLTLTSDDGRVQAQGTLRYRYDVQDRRRVTTPAGSFDVWVVTRQIRDDVGGLFPQAQQL
WFTPFVGDVRTPEGLLLTGRNFGGK
>Mature_265_residues
MKAPFFHTSDVTPHPTIRPMHPSNFSNADRIEPMSRFTLNPMRGRATLLAVPLLTLLGACAPTATKTVTAPVQASISVSS
VSFYPRETGLSWTYLPEGEAAGGLPYTLRALGPTMFAGQPALAFELTGRGADQTWYRQVSASGVQLLGFRKPGVTARLEP
AWTEAPAEGAWRVGLSWEGQSRLTLTSDDGRVQAQGTLRYRYDVQDRRRVTTPAGSFDVWVVTRQIRDDVGGLFPQAQQL
WFTPFVGDVRTPEGLLLTGRNFGGK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28967; Mature: 28967

Theoretical pI: Translated: 10.16; Mature: 10.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAPFFHTSDVTPHPTIRPMHPSNFSNADRIEPMSRFTLNPMRGRATLLAVPLLTLLGAC
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHEECCCCCCCHHHHHHHHHHHHHCC
APTATKTVTAPVQASISVSSVSFYPRETGLSWTYLPEGEAAGGLPYTLRALGPTMFAGQP
CCCCCCEEECCCEEEEEEEEEEECCHHCCCEEEECCCCCCCCCCCEEHHHCCCHHCCCCC
ALAFELTGRGADQTWYRQVSASGVQLLGFRKPGVTARLEPAWTEAPAEGAWRVGLSWEGQ
EEEEEEECCCCCHHHHHHHCCCCEEEEEECCCCCCEEECCCCCCCCCCCCEEEEEEECCC
SRLTLTSDDGRVQAQGTLRYRYDVQDRRRVTTPAGSFDVWVVTRQIRDDVGGLFPQAQQL
CEEEEECCCCEEEEEEEEEEEECCCCCEEEECCCCCEEEEEEEHHHHHHHCCCCCCCHHE
WFTPFVGDVRTPEGLLLTGRNFGGK
EECCCCCCCCCCCCEEEECCCCCCC
>Mature Secondary Structure
MKAPFFHTSDVTPHPTIRPMHPSNFSNADRIEPMSRFTLNPMRGRATLLAVPLLTLLGAC
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHEECCCCCCCHHHHHHHHHHHHHCC
APTATKTVTAPVQASISVSSVSFYPRETGLSWTYLPEGEAAGGLPYTLRALGPTMFAGQP
CCCCCCEEECCCEEEEEEEEEEECCHHCCCEEEECCCCCCCCCCCEEHHHCCCHHCCCCC
ALAFELTGRGADQTWYRQVSASGVQLLGFRKPGVTARLEPAWTEAPAEGAWRVGLSWEGQ
EEEEEEECCCCCHHHHHHHCCCCEEEEEECCCCCCEEECCCCCCCCCCCCEEEEEEECCC
SRLTLTSDDGRVQAQGTLRYRYDVQDRRRVTTPAGSFDVWVVTRQIRDDVGGLFPQAQQL
CEEEEECCCCEEEEEEEEEEEECCCCCEEEECCCCCEEEEEEEHHHHHHHCCCCCCCHHE
WFTPFVGDVRTPEGLLLTGRNFGGK
EECCCCCCCCCCCCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA