| Definition | Deinococcus geothermalis DSM 11300, complete genome. |
|---|---|
| Accession | NC_008025 |
| Length | 2,467,205 |
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The map label for this gene is 94985062
Identifier: 94985062
GI number: 94985062
Start: 1024096
End: 1024686
Strand: Reverse
Name: 94985062
Synonym: Dgeo_0956
Alternate gene names: NA
Gene position: 1024686-1024096 (Counterclockwise)
Preceding gene: 94985063
Following gene: 94985061
Centisome position: 41.53
GC content: 70.9
Gene sequence:
>591_bases ATGACCTCCACCGCGCCGGCCACGCCCCCAGAAACGGATCGGGCCGCCCTTCCTCCTCGCCCGCTGGCGCTCGCCCGTAT GTTTATGGGCGTCGCGCTCTCGGGAATTGGCGGCGGTCTGCCTGCCCACACCCGGCGGGCACTGGTCACGCGCGGCTGGA TGACCGATGAAGCCTTCGCTGAGACCTTTACACTCGCGCAACTCACGCCCGGGCCAAACGCCGTCAATCTGGCGGCGATG GTCGGTGCCCGCCTCGCCGGGCCCGGAGGAGCGCTCGCCAGCGTGGGGGGGGTCTTGGCCCCGGGGCTGCTGGCCATGCT CGCCGTAAGTGTGGTGACGCTCGAACAGACGGGAGGCTTACCGCCAGCGCTGCAGAGCGCCCTGCGCGGCGCCGCCTGTG CAGCGCTGGCCGTGCTGTTGACGGCGGCCCTGCCGGTCGTGCGGGTGGGGTGGAAGGGAAGGGGTGGGCCGGTGATCACG GTGCTGGCCTTTCTCGCGCTGGGCGTGCTGCGGCTCGACCTCTTCCCCGTCCTTCTGGTGCTGCTGAGCGCCGGTCTGCT GATACACCGGCCTGGAGGGAAAGGTGCCTGA
Upstream 100 bases:
>100_bases TTTCGGGGCGGCTGAGGATTGACATTTCGTGCATTGCGTGCCCAGCTGTTCCCCAGCAAGTCACGGCAAGGGCGGCTGGC AGCGGGTTTAGGCTCCAACC
Downstream 100 bases:
>100_bases CTTCTGGGCGATGCTCCTGGCCTTTGCCCGCCTGGGCCTGATCAGCTTTGGCGGAACGAACGTGGCAGAGTTGGAACGGT CCCTCGTGCTCCAACACGGC
Product: chromate transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 196; Mature: 195
Protein sequence:
>196_residues MTSTAPATPPETDRAALPPRPLALARMFMGVALSGIGGGLPAHTRRALVTRGWMTDEAFAETFTLAQLTPGPNAVNLAAM VGARLAGPGGALASVGGVLAPGLLAMLAVSVVTLEQTGGLPPALQSALRGAACAALAVLLTAALPVVRVGWKGRGGPVIT VLAFLALGVLRLDLFPVLLVLLSAGLLIHRPGGKGA
Sequences:
>Translated_196_residues MTSTAPATPPETDRAALPPRPLALARMFMGVALSGIGGGLPAHTRRALVTRGWMTDEAFAETFTLAQLTPGPNAVNLAAM VGARLAGPGGALASVGGVLAPGLLAMLAVSVVTLEQTGGLPPALQSALRGAACAALAVLLTAALPVVRVGWKGRGGPVIT VLAFLALGVLRLDLFPVLLVLLSAGLLIHRPGGKGA >Mature_195_residues TSTAPATPPETDRAALPPRPLALARMFMGVALSGIGGGLPAHTRRALVTRGWMTDEAFAETFTLAQLTPGPNAVNLAAMV GARLAGPGGALASVGGVLAPGLLAMLAVSVVTLEQTGGLPPALQSALRGAACAALAVLLTAALPVVRVGWKGRGGPVITV LAFLALGVLRLDLFPVLLVLLSAGLLIHRPGGKGA
Specific function: Unknown
COG id: COG2059
COG function: function code P; Chromate transport protein ChrA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19541; Mature: 19409
Theoretical pI: Translated: 12.04; Mature: 12.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSTAPATPPETDRAALPPRPLALARMFMGVALSGIGGGLPAHTRRALVTRGWMTDEAFA CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHH ETFTLAQLTPGPNAVNLAAMVGARLAGPGGALASVGGVLAPGLLAMLAVSVVTLEQTGGL HHHHHHEECCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC PPALQSALRGAACAALAVLLTAALPVVRVGWKGRGGPVITVLAFLALGVLRLDLFPVLLV CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH LLSAGLLIHRPGGKGA HHHCCEEEECCCCCCC >Mature Secondary Structure TSTAPATPPETDRAALPPRPLALARMFMGVALSGIGGGLPAHTRRALVTRGWMTDEAFA CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHH ETFTLAQLTPGPNAVNLAAMVGARLAGPGGALASVGGVLAPGLLAMLAVSVVTLEQTGGL HHHHHHEECCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC PPALQSALRGAACAALAVLLTAALPVVRVGWKGRGGPVITVLAFLALGVLRLDLFPVLLV CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH LLSAGLLIHRPGGKGA HHHCCEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA