| Definition | Deinococcus geothermalis DSM 11300, complete genome. |
|---|---|
| Accession | NC_008025 |
| Length | 2,467,205 |
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The map label for this gene is 94985061
Identifier: 94985061
GI number: 94985061
Start: 1023588
End: 1024103
Strand: Reverse
Name: 94985061
Synonym: Dgeo_0955
Alternate gene names: NA
Gene position: 1024103-1023588 (Counterclockwise)
Preceding gene: 94985062
Following gene: 94985060
Centisome position: 41.51
GC content: 65.89
Gene sequence:
>516_bases GTGCCTGACTTCTGGGCGATGCTCCTGGCCTTTGCCCGCCTGGGCCTGATCAGCTTTGGCGGAACGAACGTGGCAGAGTT GGAACGGTCCCTCGTGCTCCAACACGGCTGGATCGACGCGCAGACACTGGCTAACGGGTTTGCTCTGGGACAACTGATGC CGGGGCCGAACATGCTGGCGGTCACTCACTACGGGTACGCTGCCGCCGGGTTGAGCGGGGCACTTGCGGCCACCCTGGGG TTTTACGGCCCAACTGCGCTGCTGAGTGCTCTCGCGGTCCTGATTTGGCAGCGGCACAGCGCGCATCCTTGGGTGATCGC CTTTCGCAACGCGCTCTTGCCCTTTGGTGGCGGCGTGATGCTGGCAGGAGCGCTGGTGCTGGCGCGAACCAGCGTGACCT CCTGGCCCGCAGGACTGCTGGCAGCTCTCGCCTTTCTGCTGCTGTGGCGCACAAGGGTCAACAGCGCGGTGGTGGTGCTG GGGGCCGCAGTGGTCGGCGCGCTGCTGAGGTTGTAG
Upstream 100 bases:
>100_bases CTGGCCTTTCTCGCGCTGGGCGTGCTGCGGCTCGACCTCTTCCCCGTCCTTCTGGTGCTGCTGAGCGCCGGTCTGCTGAT ACACCGGCCTGGAGGGAAAG
Downstream 100 bases:
>100_bases GGCCGAGAAAGAGCTGTAGCATGGCAGACGTGCCAACAGACTGGCGCGAGCATGCCTCCGCGCGGCGGGCGCGGCCCCGC CTGTTGACACTGTTGCGTTC
Product: chromate transporter
Products: NA
Alternate protein names: Chromate Transporter Family; ChrA Half Sized-Like Protein
Number of amino acids: Translated: 171; Mature: 170
Protein sequence:
>171_residues MPDFWAMLLAFARLGLISFGGTNVAELERSLVLQHGWIDAQTLANGFALGQLMPGPNMLAVTHYGYAAAGLSGALAATLG FYGPTALLSALAVLIWQRHSAHPWVIAFRNALLPFGGGVMLAGALVLARTSVTSWPAGLLAALAFLLLWRTRVNSAVVVL GAAVVGALLRL
Sequences:
>Translated_171_residues MPDFWAMLLAFARLGLISFGGTNVAELERSLVLQHGWIDAQTLANGFALGQLMPGPNMLAVTHYGYAAAGLSGALAATLG FYGPTALLSALAVLIWQRHSAHPWVIAFRNALLPFGGGVMLAGALVLARTSVTSWPAGLLAALAFLLLWRTRVNSAVVVL GAAVVGALLRL >Mature_170_residues PDFWAMLLAFARLGLISFGGTNVAELERSLVLQHGWIDAQTLANGFALGQLMPGPNMLAVTHYGYAAAGLSGALAATLGF YGPTALLSALAVLIWQRHSAHPWVIAFRNALLPFGGGVMLAGALVLARTSVTSWPAGLLAALAFLLLWRTRVNSAVVVLG AAVVGALLRL
Specific function: Unknown
COG id: COG2059
COG function: function code P; Chromate transport protein ChrA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17875; Mature: 17744
Theoretical pI: Translated: 11.08; Mature: 11.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDFWAMLLAFARLGLISFGGTNVAELERSLVLQHGWIDAQTLANGFALGQLMPGPNMLA CCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCEEE VTHYGYAAAGLSGALAATLGFYGPTALLSALAVLIWQRHSAHPWVIAFRNALLPFGGGVM EECCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHH LAGALVLARTSVTSWPAGLLAALAFLLLWRTRVNSAVVVLGAAVVGALLRL HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCC >Mature Secondary Structure PDFWAMLLAFARLGLISFGGTNVAELERSLVLQHGWIDAQTLANGFALGQLMPGPNMLA CHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCEEE VTHYGYAAAGLSGALAATLGFYGPTALLSALAVLIWQRHSAHPWVIAFRNALLPFGGGVM EECCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHH LAGALVLARTSVTSWPAGLLAALAFLLLWRTRVNSAVVVLGAAVVGALLRL HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA