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The map label for this gene is fadM [H]

Identifier: 94984958

GI number: 94984958

Start: 910513

End: 911445

Strand: Reverse

Name: fadM [H]

Synonym: Dgeo_0851

Alternate gene names: 94984958

Gene position: 911445-910513 (Counterclockwise)

Preceding gene: 94984959

Following gene: 94984957

Centisome position: 36.94

GC content: 65.17

Gene sequence:

>933_bases
ATGATCGACCAGCTCTACCGCAAAGCCGTCCTGACCGTCTCGGGACAGAAGTTCGTGGAAAACCTCGTTCGCGCGCGGGG
CTGGGGGGTGGCCCAGCGCTTCGTGGCGGGGGAGGACGCCGCCTCCGCCCTCCAGGCTGTCCGCGAGCTGGAAGGTGACG
GCATCCTGGGGAATCTGGACCTGCTGGGCGAGTTCATCGACTCGCCGGAACAGTGCAACGCCTTTGCGGAACGGGTGCTG
AGCCTGCTTGACCAGGCGAACGCCGCCGGAATCCGGCCCTATGTCAGCATCAAGCTCTCCAGCGTCGGGCAGGGACAGAC
CGTGAACGGCGAAGATCTCGGCCTAAGCAACGCCCGCCGGATCGTGGGCCGGGCGAAGGGGTACGGCGGCTTCGTGTGCC
TGGACATGGAGGACCACACCCGCGTGGACCTCACGCTGGCCCAGTTCCGCACGCTGGTGAACGAGTTCGGCAATGCGTTT
GTCGGAACCGTGCTACAAAGCTACCTCTACCGTTCGGAGGCCGACCTCGCCGCCCTGGGAGACCTGCGTCCCAACCTGCG
CATCGTCAAGGGGGCTTACCTCGAACCCGCGACGGTCGCCATGCCCGACAAGGCCGATGTGGACGCCAGTTATCGCCGCC
TGGTGTACGCCCAGATGAAGGCGGGCCATTACGTCAACGTTGCCACGCACGACGAGCGCATCATCGAGGACGTGAAGCAT
TTCGTGCTTGCACACGGGATCAGCAAGGACGCCTTCGAGTTCCAGATGCTCTACGGGATCCGCCGCGACCTTCAGAAAGA
GCTGGCCCAGCAGGGCTACCGCGTCCGCGCCTACATCCCCTACGGGCGCGACTGGTACCCGTACTTTGCCCGCCGCATTG
CCGAAACCCCGCGCAATGCCCTCTTCGTGCTGCGCGGGATGCTGAAGGGGTAG

Upstream 100 bases:

>100_bases
AGGCCATCCTCGCCCGCGACGCGGCCAGCGCCCGCACGGCTGCTCGCACCCACGTCCGCACCTTTGCCGCCCTCGTCCTG
CAAGACCTCGGAGAACCGAT

Downstream 100 bases:

>100_bases
CCGCGTTCTCCCAGAAGCTCCGCAAGACAAGCCGCCCTTCGTCCCAAAGGAAGTGACCCATGCTCAAAGTCCAGGACTAC
CGCCCGCAGCCCTTCACCGA

Product: proline dehydrogenase

Products: NA

Alternate protein names: PRODH 1; Proline oxidase 1 [H]

Number of amino acids: Translated: 310; Mature: 310

Protein sequence:

>310_residues
MIDQLYRKAVLTVSGQKFVENLVRARGWGVAQRFVAGEDAASALQAVRELEGDGILGNLDLLGEFIDSPEQCNAFAERVL
SLLDQANAAGIRPYVSIKLSSVGQGQTVNGEDLGLSNARRIVGRAKGYGGFVCLDMEDHTRVDLTLAQFRTLVNEFGNAF
VGTVLQSYLYRSEADLAALGDLRPNLRIVKGAYLEPATVAMPDKADVDASYRRLVYAQMKAGHYVNVATHDERIIEDVKH
FVLAHGISKDAFEFQMLYGIRRDLQKELAQQGYRVRAYIPYGRDWYPYFARRIAETPRNALFVLRGMLKG

Sequences:

>Translated_310_residues
MIDQLYRKAVLTVSGQKFVENLVRARGWGVAQRFVAGEDAASALQAVRELEGDGILGNLDLLGEFIDSPEQCNAFAERVL
SLLDQANAAGIRPYVSIKLSSVGQGQTVNGEDLGLSNARRIVGRAKGYGGFVCLDMEDHTRVDLTLAQFRTLVNEFGNAF
VGTVLQSYLYRSEADLAALGDLRPNLRIVKGAYLEPATVAMPDKADVDASYRRLVYAQMKAGHYVNVATHDERIIEDVKH
FVLAHGISKDAFEFQMLYGIRRDLQKELAQQGYRVRAYIPYGRDWYPYFARRIAETPRNALFVLRGMLKG
>Mature_310_residues
MIDQLYRKAVLTVSGQKFVENLVRARGWGVAQRFVAGEDAASALQAVRELEGDGILGNLDLLGEFIDSPEQCNAFAERVL
SLLDQANAAGIRPYVSIKLSSVGQGQTVNGEDLGLSNARRIVGRAKGYGGFVCLDMEDHTRVDLTLAQFRTLVNEFGNAF
VGTVLQSYLYRSEADLAALGDLRPNLRIVKGAYLEPATVAMPDKADVDASYRRLVYAQMKAGHYVNVATHDERIIEDVKH
FVLAHGISKDAFEFQMLYGIRRDLQKELAQQGYRVRAYIPYGRDWYPYFARRIAETPRNALFVLRGMLKG

Specific function: Catalyzes the oxidation of L-proline to delta-1- pyrroline-5-carboxylate (P5C) [H]

COG id: COG0506

COG function: function code E; Proline dehydrogenase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the proline oxidase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015590
- InterPro:   IPR002872
- InterPro:   IPR008219 [H]

Pfam domain/function: PF01619 Pro_dh [H]

EC number: =1.5.99.8 [H]

Molecular weight: Translated: 34544; Mature: 34544

Theoretical pI: Translated: 8.17; Mature: 8.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDQLYRKAVLTVSGQKFVENLVRARGWGVAQRFVAGEDAASALQAVRELEGDGILGNLD
CHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHCCCCCEECHH
LLGEFIDSPEQCNAFAERVLSLLDQANAAGIRPYVSIKLSSVGQGQTVNGEDLGLSNARR
HHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHH
IVGRAKGYGGFVCLDMEDHTRVDLTLAQFRTLVNEFGNAFVGTVLQSYLYRSEADLAALG
HHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
DLRPNLRIVKGAYLEPATVAMPDKADVDASYRRLVYAQMKAGHYVNVATHDERIIEDVKH
CCCCCCEEEECCCCCCCEEECCCCCCCCHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHH
FVLAHGISKDAFEFQMLYGIRRDLQKELAQQGYRVRAYIPYGRDWYPYFARRIAETPRNA
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHCCHHH
LFVLRGMLKG
HHHHHHHHCC
>Mature Secondary Structure
MIDQLYRKAVLTVSGQKFVENLVRARGWGVAQRFVAGEDAASALQAVRELEGDGILGNLD
CHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHCCCCCEECHH
LLGEFIDSPEQCNAFAERVLSLLDQANAAGIRPYVSIKLSSVGQGQTVNGEDLGLSNARR
HHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHH
IVGRAKGYGGFVCLDMEDHTRVDLTLAQFRTLVNEFGNAFVGTVLQSYLYRSEADLAALG
HHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
DLRPNLRIVKGAYLEPATVAMPDKADVDASYRRLVYAQMKAGHYVNVATHDERIIEDVKH
CCCCCCEEEECCCCCCCEEECCCCCCCCHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHH
FVLAHGISKDAFEFQMLYGIRRDLQKELAQQGYRVRAYIPYGRDWYPYFARRIAETPRNA
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHCCHHH
LFVLRGMLKG
HHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA