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The map label for this gene is tapC [H]

Identifier: 94984864

GI number: 94984864

Start: 821220

End: 822440

Strand: Reverse

Name: tapC [H]

Synonym: Dgeo_0757

Alternate gene names: 94984864

Gene position: 822440-821220 (Counterclockwise)

Preceding gene: 94984868

Following gene: 94984860

Centisome position: 33.33

GC content: 60.2

Gene sequence:

>1221_bases
ATGCCGGTCTACGAATACCGCGTCCGGGACCGCTCCGGAAAAGTCCTGAAGTCCCAGATGGAGGCCGAGACCGCCGCCCA
GGTCCGCGACGCCCTACGCGCCAAGAATCTGCTGATCGTCGAGATCAAGCCACCCAAAACCGGGCTCAATGCCGACGTCA
AGATCCCCGGCCTCTCAGATCGTCCCCCCGGACTCAAGCAGGTGGCGATCTTTAGCAAGCAGCTCGCCACGCTGATCAAT
GCGGGCGTGCCGCTGGTGCAGGCACTAGCCATCCTGCAACGCCAAATCGAGAACAAAACCTTCCAGAACATCATCAAGAG
TATCCGCACCGACGTGGAGAGCGGCACCCCCCTGAGCGAGGCCCTCGTCAAACATCCCAAAGTCTTTAACCGGCTGTACA
TCAACCTGGTGCGGGCGGGCGAGACGAGCGGCACGCTGGACAGCATCCTGGAGCGCATCGCCGCCTTTCAGGAAAAGGAG
CTCGGCCTGCGCGGCAAGCTCAAGAGCGCCCTGACCTACCCGGTGGTCGTGCTGGTCTTTGCCATCGGAATTACGTACTT
TCTGCTCACGACCATCGTGCCGCAGTTTGCCGGCATTCTGGCGCAGCTCAACGCACCGCTTCCCTTGATTACTCGGGCGC
TGATGGCCGTCTCCGACTTCCTCCAGCACTCCGGGCTGCTGATCTTGGTCTTTGTGGCCGTGCTGGTCTTTGCCTACCGC
TGGTTCTACAAGACACCGAAGGGACGGCACGTCATCGACGACATCAAGCTGCGGCTGCCGGTCTTCGGCAACCTGCTGCA
AAAAAGCGCAATCAGCTCGTTTGCTCGCACGTTCGGCCTGCTGATCGGCAGCGGCGTCAACATCATTGAGAGTCTGGAAA
TCACCAAGGGCACCGCGAACAACGCGATTGTCGAGGACACCATTGAGAACGCCAAGAACGTGGTGATGGTCGGCGAACCG
ATGAGCGCCAGCCTCGCGACCAGCAAAGTGTTTCCGCCCATGGTCGTCAGCATGGTCGCCATCGGTGAGGAAACCGGCTC
GCTTGATAGCATGCTGGTTAAGGTCGGTGACTTCTACGACCGTGAGGTGGATGAGGCCGTCGCCAGCCTGACTGCCGCCA
TCGAACCGCTGATGATTGTGTTCCTAGGCGGAATCGTGGGCACGATCGTCGCGGGCATGTTTTTGCCGATGTTCAGCATC
ATCGGGCAGCTCAGCAAGTGA

Upstream 100 bases:

>100_bases
TCCGTGATGTGTGGCTGCTTTTCCATACACAGTTCCTTGTTCTGAAGCGCGTTGCCCCTTGTAAGGCAAGCGCAAGACGC
ACTGAACTATACTCGCGGCC

Downstream 100 bases:

>100_bases
GGGGACAGCGCCCTGCTGGAGACCACACTGTTGGAGATCGCCTCCTCCCCCTGCAATCCTCTGCTCCGGCGAAGAGCGCC
GGTGGGGGTGTCGGTGTTCA

Product: type II secretion system protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 406; Mature: 405

Protein sequence:

>406_residues
MPVYEYRVRDRSGKVLKSQMEAETAAQVRDALRAKNLLIVEIKPPKTGLNADVKIPGLSDRPPGLKQVAIFSKQLATLIN
AGVPLVQALAILQRQIENKTFQNIIKSIRTDVESGTPLSEALVKHPKVFNRLYINLVRAGETSGTLDSILERIAAFQEKE
LGLRGKLKSALTYPVVVLVFAIGITYFLLTTIVPQFAGILAQLNAPLPLITRALMAVSDFLQHSGLLILVFVAVLVFAYR
WFYKTPKGRHVIDDIKLRLPVFGNLLQKSAISSFARTFGLLIGSGVNIIESLEITKGTANNAIVEDTIENAKNVVMVGEP
MSASLATSKVFPPMVVSMVAIGEETGSLDSMLVKVGDFYDREVDEAVASLTAAIEPLMIVFLGGIVGTIVAGMFLPMFSI
IGQLSK

Sequences:

>Translated_406_residues
MPVYEYRVRDRSGKVLKSQMEAETAAQVRDALRAKNLLIVEIKPPKTGLNADVKIPGLSDRPPGLKQVAIFSKQLATLIN
AGVPLVQALAILQRQIENKTFQNIIKSIRTDVESGTPLSEALVKHPKVFNRLYINLVRAGETSGTLDSILERIAAFQEKE
LGLRGKLKSALTYPVVVLVFAIGITYFLLTTIVPQFAGILAQLNAPLPLITRALMAVSDFLQHSGLLILVFVAVLVFAYR
WFYKTPKGRHVIDDIKLRLPVFGNLLQKSAISSFARTFGLLIGSGVNIIESLEITKGTANNAIVEDTIENAKNVVMVGEP
MSASLATSKVFPPMVVSMVAIGEETGSLDSMLVKVGDFYDREVDEAVASLTAAIEPLMIVFLGGIVGTIVAGMFLPMFSI
IGQLSK
>Mature_405_residues
PVYEYRVRDRSGKVLKSQMEAETAAQVRDALRAKNLLIVEIKPPKTGLNADVKIPGLSDRPPGLKQVAIFSKQLATLINA
GVPLVQALAILQRQIENKTFQNIIKSIRTDVESGTPLSEALVKHPKVFNRLYINLVRAGETSGTLDSILERIAAFQEKEL
GLRGKLKSALTYPVVVLVFAIGITYFLLTTIVPQFAGILAQLNAPLPLITRALMAVSDFLQHSGLLILVFVAVLVFAYRW
FYKTPKGRHVIDDIKLRLPVFGNLLQKSAISSFARTFGLLIGSGVNIIESLEITKGTANNAIVEDTIENAKNVVMVGEPM
SASLATSKVFPPMVVSMVAIGEETGSLDSMLVKVGDFYDREVDEAVASLTAAIEPLMIVFLGGIVGTIVAGMFLPMFSII
GQLSK

Specific function: Involved in the translocation of the type IV pilin [H]

COG id: COG1459

COG function: function code NU; Type II secretory pathway, component PulF

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP F family [H]

Homologues:

Organism=Escherichia coli, GI1789724, Length=399, Percent_Identity=31.077694235589, Blast_Score=217, Evalue=9e-58,
Organism=Escherichia coli, GI1786295, Length=351, Percent_Identity=30.1994301994302, Blast_Score=175, Evalue=6e-45,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003004
- InterPro:   IPR018076
- InterPro:   IPR001992 [H]

Pfam domain/function: PF00482 GSPII_F [H]

EC number: NA

Molecular weight: Translated: 44104; Mature: 43973

Theoretical pI: Translated: 9.92; Mature: 9.92

Prosite motif: PS00874 T2SP_F

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVYEYRVRDRSGKVLKSQMEAETAAQVRDALRAKNLLIVEIKPPKTGLNADVKIPGLSD
CCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCEECCCCCC
RPPGLKQVAIFSKQLATLINAGVPLVQALAILQRQIENKTFQNIIKSIRTDVESGTPLSE
CCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
ALVKHPKVFNRLYINLVRAGETSGTLDSILERIAAFQEKELGLRGKLKSALTYPVVVLVF
HHHHCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
AIGITYFLLTTIVPQFAGILAQLNAPLPLITRALMAVSDFLQHSGLLILVFVAVLVFAYR
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
WFYKTPKGRHVIDDIKLRLPVFGNLLQKSAISSFARTFGLLIGSGVNIIESLEITKGTAN
HHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCC
NAIVEDTIENAKNVVMVGEPMSASLATSKVFPPMVVSMVAIGEETGSLDSMLVKVGDFYD
CCHHHHHHHCCCCEEEECCCCCHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
REVDEAVASLTAAIEPLMIVFLGGIVGTIVAGMFLPMFSIIGQLSK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PVYEYRVRDRSGKVLKSQMEAETAAQVRDALRAKNLLIVEIKPPKTGLNADVKIPGLSD
CCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCEECCCCCC
RPPGLKQVAIFSKQLATLINAGVPLVQALAILQRQIENKTFQNIIKSIRTDVESGTPLSE
CCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
ALVKHPKVFNRLYINLVRAGETSGTLDSILERIAAFQEKELGLRGKLKSALTYPVVVLVF
HHHHCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
AIGITYFLLTTIVPQFAGILAQLNAPLPLITRALMAVSDFLQHSGLLILVFVAVLVFAYR
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
WFYKTPKGRHVIDDIKLRLPVFGNLLQKSAISSFARTFGLLIGSGVNIIESLEITKGTAN
HHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCC
NAIVEDTIENAKNVVMVGEPMSASLATSKVFPPMVVSMVAIGEETGSLDSMLVKVGDFYD
CCHHHHHHHCCCCEEEECCCCCHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
REVDEAVASLTAAIEPLMIVFLGGIVGTIVAGMFLPMFSIIGQLSK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8820654 [H]