| Definition | Deinococcus geothermalis DSM 11300, complete genome. |
|---|---|
| Accession | NC_008025 |
| Length | 2,467,205 |
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The map label for this gene is nhaA2 [H]
Identifier: 94984854
GI number: 94984854
Start: 807815
End: 808822
Strand: Reverse
Name: nhaA2 [H]
Synonym: Dgeo_0747
Alternate gene names: 94984854
Gene position: 808822-807815 (Counterclockwise)
Preceding gene: 94984855
Following gene: 94984849
Centisome position: 32.78
GC content: 68.95
Gene sequence:
>1008_bases ATGAACCGTGTGATCGGTCTGGTGGCGGGAGCACTCCTCGCCGCAAATCTGGGAAGCCAGGCAAGCGCCCAACTGCTCGC AACGCCTGCCGCAACGGCGGCGCAGCCTCTGCTGGCGGGATTCCGGGTCAGTGGGAGCACCCTAACACGGGGCACCACCA CACTCACGCTGGACACGGCCGGGGGCCGCGTGGTGGGCGTACTGGTGCAGGCGGACAACCCGCAAGACGTGGCGCGAGCG CTGGTGGCCGCCTGGGGGGGTCCTGAGCAGAACGTGGCGGCCGTCGCCCAGGCCCTGGGCCGCGACGACCTGCAACGGGA GGCCCGCGGCGCCCAGGGCCTGCGGGACGACAGCGAGGGCACCCTCCTGCGGGTCAAGCTGAACGGGACGGGCGGCGCCC AGCGCTGGACCGCCTACACCGCCCTCCTGATCTTCCCCGACCGCGCCTTTCCCGCGACCGCGAACGTGCAGGGAAGCGCG CAGGCGCCCAACGTCCTGCGCATCTTCAGCGACTTCCAGTGTCCCTACTGCAAGGAGCTGTGGGACACGGCGCACCCGAA GTGGGCCGCCCAGCCGAACGTGTACCGGGTGATGCACTACCACTTTCCGTTGAGCTTCCACAAGAATGCAGAACCGGCGG CCATTGCCAGCGAGTGCGCCGCGGAGCAGGGAAAATTCTGGCCGTATGCCGATCTGCTGTTCCGCCATACCGCCGAGTGG ACCGGGCTGCCCTCCGCCAGCGCCAAATTCAGCGAGTACGCTCAGGCCGCTGGGCTGAATGTCGCCGCCTTCCAGACCTG CCTGACCAGCGCCGCGCCAAAAGCCGTTGTCCGGGCGCAGCAGGCCGCGGGCCTCAAGCTGGGCGTGCAGGGCACACCGA CGGTGTACCTCAACGGCGTCCAACTGCGAAACTACAGCGACGAGAACGAATTGGCCGCTGTGCGTGCAGTTACGGCGGCC TCGCCGGGCGCGGTGGAGGTGATCGCGGCACGCCTGAAGCGCTTCTAG
Upstream 100 bases:
>100_bases ACCTGCTGGAGCAAGCAGAACCCGCAGAGCACCTGACACGCTTCCCCACCTAGGCTCTGCCGCAACGCGGCTCACCTCTC CCCGCCGCTAGACTGCCCGC
Downstream 100 bases:
>100_bases CCTCTTACAGCCGCAGCAGGGGCCGCCACCACGGGATCGCCAGCAGCACCGCGAGCAGGCTGAGGACCGTCCAGAGGCTC GCGGTGCGGAACTTGGCCTG
Product: DSBA oxidoreductase
Products: NA
Alternate protein names: Sodium/proton antiporter nhaA 2 [H]
Number of amino acids: Translated: 335; Mature: 335
Protein sequence:
>335_residues MNRVIGLVAGALLAANLGSQASAQLLATPAATAAQPLLAGFRVSGSTLTRGTTTLTLDTAGGRVVGVLVQADNPQDVARA LVAAWGGPEQNVAAVAQALGRDDLQREARGAQGLRDDSEGTLLRVKLNGTGGAQRWTAYTALLIFPDRAFPATANVQGSA QAPNVLRIFSDFQCPYCKELWDTAHPKWAAQPNVYRVMHYHFPLSFHKNAEPAAIASECAAEQGKFWPYADLLFRHTAEW TGLPSASAKFSEYAQAAGLNVAAFQTCLTSAAPKAVVRAQQAAGLKLGVQGTPTVYLNGVQLRNYSDENELAAVRAVTAA SPGAVEVIAARLKRF
Sequences:
>Translated_335_residues MNRVIGLVAGALLAANLGSQASAQLLATPAATAAQPLLAGFRVSGSTLTRGTTTLTLDTAGGRVVGVLVQADNPQDVARA LVAAWGGPEQNVAAVAQALGRDDLQREARGAQGLRDDSEGTLLRVKLNGTGGAQRWTAYTALLIFPDRAFPATANVQGSA QAPNVLRIFSDFQCPYCKELWDTAHPKWAAQPNVYRVMHYHFPLSFHKNAEPAAIASECAAEQGKFWPYADLLFRHTAEW TGLPSASAKFSEYAQAAGLNVAAFQTCLTSAAPKAVVRAQQAAGLKLGVQGTPTVYLNGVQLRNYSDENELAAVRAVTAA SPGAVEVIAARLKRF >Mature_335_residues MNRVIGLVAGALLAANLGSQASAQLLATPAATAAQPLLAGFRVSGSTLTRGTTTLTLDTAGGRVVGVLVQADNPQDVARA LVAAWGGPEQNVAAVAQALGRDDLQREARGAQGLRDDSEGTLLRVKLNGTGGAQRWTAYTALLIFPDRAFPATANVQGSA QAPNVLRIFSDFQCPYCKELWDTAHPKWAAQPNVYRVMHYHFPLSFHKNAEPAAIASECAAEQGKFWPYADLLFRHTAEW TGLPSASAKFSEYAQAAGLNVAAFQTCLTSAAPKAVVRAQQAAGLKLGVQGTPTVYLNGVQLRNYSDENELAAVRAVTAA SPGAVEVIAARLKRF
Specific function: Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons [H]
COG id: COG1651
COG function: function code O; Protein-disulfide isomerase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001853 - InterPro: IPR023171 - InterPro: IPR004670 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF01323 DSBA; PF06965 Na_H_antiport_1 [H]
EC number: NA
Molecular weight: Translated: 35324; Mature: 35324
Theoretical pI: Translated: 9.14; Mature: 9.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRVIGLVAGALLAANLGSQASAQLLATPAATAAQPLLAGFRVSGSTLTRGTTTLTLDTA CCHHHHHHHHHHHHHCCCCCCCHHEEECCCHHHHHHHHHHEEECCCEEECCEEEEEEECC GGRVVGVLVQADNPQDVARALVAAWGGPEQNVAAVAQALGRDDLQREARGAQGLRDDSEG CCEEEEEEEECCCHHHHHHHHHHHCCCCCHHHHHHHHHHCHHHHHHHHHCCCCCCCCCCC TLLRVKLNGTGGAQRWTAYTALLIFPDRAFPATANVQGSAQAPNVLRIFSDFQCPYCKEL CEEEEEECCCCCCCHHEEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHCCCCCHHHHH WDTAHPKWAAQPNVYRVMHYHFPLSFHKNAEPAAIASECAAEQGKFWPYADLLFRHTAEW HHCCCCCCCCCCCEEEEEEEEECEEECCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHH TGLPSASAKFSEYAQAAGLNVAAFQTCLTSAAPKAVVRAQQAAGLKLGVQGTPTVYLNGV CCCCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHCCEEEECCCCCEEEEEEE QLRNYSDENELAAVRAVTAASPGAVEVIAARLKRF EEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCC >Mature Secondary Structure MNRVIGLVAGALLAANLGSQASAQLLATPAATAAQPLLAGFRVSGSTLTRGTTTLTLDTA CCHHHHHHHHHHHHHCCCCCCCHHEEECCCHHHHHHHHHHEEECCCEEECCEEEEEEECC GGRVVGVLVQADNPQDVARALVAAWGGPEQNVAAVAQALGRDDLQREARGAQGLRDDSEG CCEEEEEEEECCCHHHHHHHHHHHCCCCCHHHHHHHHHHCHHHHHHHHHCCCCCCCCCCC TLLRVKLNGTGGAQRWTAYTALLIFPDRAFPATANVQGSAQAPNVLRIFSDFQCPYCKEL CEEEEEECCCCCCCHHEEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHCCCCCHHHHH WDTAHPKWAAQPNVYRVMHYHFPLSFHKNAEPAAIASECAAEQGKFWPYADLLFRHTAEW HHCCCCCCCCCCCEEEEEEEEECEEECCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHH TGLPSASAKFSEYAQAAGLNVAAFQTCLTSAAPKAVVRAQQAAGLKLGVQGTPTVYLNGV CCCCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHCCEEEECCCCCEEEEEEE QLRNYSDENELAAVRAVTAASPGAVEVIAARLKRF EEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA