Click here to switch to the map view.

The map label for this gene is tcsA [H]

Identifier: 94984802

GI number: 94984802

Start: 754590

End: 755702

Strand: Reverse

Name: tcsA [H]

Synonym: Dgeo_0695

Alternate gene names: 94984802

Gene position: 755702-754590 (Counterclockwise)

Preceding gene: 94984808

Following gene: 94984801

Centisome position: 30.63

GC content: 62.8

Gene sequence:

>1113_bases
ATGAAAAAAGGCCTAACCCTCGCCCTCGCCGCCGCTGTTGCCGCCTCGGCCACCCTTGCTGCCGCACAGAGCACGGTCCG
CGTCGGCATCGCCTTTGACGCGGGCGGCAAGTTCGACAAGAGCTTTAACCAAAGTGCCTGGGAAGGCACCCAGCGGGCCG
TGAAGCAGCTCGGCGTGCAAGTGAAGGACTTCGAACCCAGCGATCCCAGCCAGACCGTGCAGGGCATCCGCTCCTTCGCC
AACAGCGGCTTTGACCTGATCATCGGCGTGGGCTTTGCCAACAACGCCTCCATCACCCAGGTCGCCAAGGAGAACCCCGA
CCTGGCCTTTGGTCTGGTGGACGACGTCAGCCCCGCCAAGAACGTTGCCAGCCTGGTCTTCTCCGAGCAGGAAGGCAGCT
ATCTGGTCGGCTACCTCGCAGGCCTGAACACCAGCACCGGCGTGGTGGGCTTTGTGGGCGGCATGGACGTGCCGCTGATT
CACAAGTTCGAGGCGGGCTACACGGCGGGCGTGAAAGCGGCCAACCCTAAAGCCCGCGTCATCGCACAGTATGTCGGCAC
CACTCCCGACGCTTGGAACAACCCCGGCAAGGCCAAGGAAATTGCGGCCAGCATGCGCGCCAAGGGTGCGGACATCATCT
TCGCGGCGGCAGGAGCCAGCGGCAACGGCGTGATTGACTACGTCAAGCAGACCCAGTGCCTCAAGGCCAACCAGCTCCCC
GCGGGCGTGAAGTTCGGCAGCGACAACTTCAAGAATGTGCCCAAGAGTGCCAGCTACAAGCAGGCCTGCGCGGGCAACAC
CCGGCCCCTCTTCTTCATCGGCGTGGACAGCAACCAGAACTACCTGGGCGACTTCGACAAGAACCCCGCCACGCTCAACC
ACGGCCTGACCTCGATGGTCAAGCGCGTGGACAACGCGGTGTTTGCCCTGATCAAGGACGTCAAGGACAACAAGTTCAAG
GGTGGCGAACGCCGCTTCGGCCTGAAGGAAGGTGGCGTGGGCTACGCCGTCGACCAGTACAACAAGGCCCTGATCCCCAG
CAGCCAGGTGGCCAAAGTCGAGGCCATCAAGAACCAGATCATCAGCGGCAAGATCCAGGTGCCCAGCAAGTAA

Upstream 100 bases:

>100_bases
CCCGCAAGCCTGGCTGGGGTCTAGACACCTGCCGATTTCCGTATACTCTGTTTGAGGTTTTCACAGCTCCGCAGATGCAT
CCCCACACTTGGAGGAATAC

Downstream 100 bases:

>100_bases
GCTCGGCAGTTCAGAAGGAGTCAGAAGGAGGCGGCCCCACGCGGGTCGCCTTCTTTTGACTTTTGCACTCTGCTTTTTGA
CGCAACTCCTGCGCCCACCT

Product: basic membrane lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 370; Mature: 370

Protein sequence:

>370_residues
MKKGLTLALAAAVAASATLAAAQSTVRVGIAFDAGGKFDKSFNQSAWEGTQRAVKQLGVQVKDFEPSDPSQTVQGIRSFA
NSGFDLIIGVGFANNASITQVAKENPDLAFGLVDDVSPAKNVASLVFSEQEGSYLVGYLAGLNTSTGVVGFVGGMDVPLI
HKFEAGYTAGVKAANPKARVIAQYVGTTPDAWNNPGKAKEIAASMRAKGADIIFAAAGASGNGVIDYVKQTQCLKANQLP
AGVKFGSDNFKNVPKSASYKQACAGNTRPLFFIGVDSNQNYLGDFDKNPATLNHGLTSMVKRVDNAVFALIKDVKDNKFK
GGERRFGLKEGGVGYAVDQYNKALIPSSQVAKVEAIKNQIISGKIQVPSK

Sequences:

>Translated_370_residues
MKKGLTLALAAAVAASATLAAAQSTVRVGIAFDAGGKFDKSFNQSAWEGTQRAVKQLGVQVKDFEPSDPSQTVQGIRSFA
NSGFDLIIGVGFANNASITQVAKENPDLAFGLVDDVSPAKNVASLVFSEQEGSYLVGYLAGLNTSTGVVGFVGGMDVPLI
HKFEAGYTAGVKAANPKARVIAQYVGTTPDAWNNPGKAKEIAASMRAKGADIIFAAAGASGNGVIDYVKQTQCLKANQLP
AGVKFGSDNFKNVPKSASYKQACAGNTRPLFFIGVDSNQNYLGDFDKNPATLNHGLTSMVKRVDNAVFALIKDVKDNKFK
GGERRFGLKEGGVGYAVDQYNKALIPSSQVAKVEAIKNQIISGKIQVPSK
>Mature_370_residues
MKKGLTLALAAAVAASATLAAAQSTVRVGIAFDAGGKFDKSFNQSAWEGTQRAVKQLGVQVKDFEPSDPSQTVQGIRSFA
NSGFDLIIGVGFANNASITQVAKENPDLAFGLVDDVSPAKNVASLVFSEQEGSYLVGYLAGLNTSTGVVGFVGGMDVPLI
HKFEAGYTAGVKAANPKARVIAQYVGTTPDAWNNPGKAKEIAASMRAKGADIIFAAAGASGNGVIDYVKQTQCLKANQLP
AGVKFGSDNFKNVPKSASYKQACAGNTRPLFFIGVDSNQNYLGDFDKNPATLNHGLTSMVKRVDNAVFALIKDVKDNKFK
GGERRFGLKEGGVGYAVDQYNKALIPSSQVAKVEAIKNQIISGKIQVPSK

Specific function: Unknown

COG id: COG1744

COG function: function code R; Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BMP lipoprotein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003760 [H]

Pfam domain/function: PF02608 Bmp [H]

EC number: NA

Molecular weight: Translated: 38795; Mature: 38795

Theoretical pI: Translated: 9.98; Mature: 9.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKGLTLALAAAVAASATLAAAQSTVRVGIAFDAGGKFDKSFNQSAWEGTQRAVKQLGVQ
CCCCHHHHHHHHHHHHHHHHHHHCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCE
VKDFEPSDPSQTVQGIRSFANSGFDLIIGVGFANNASITQVAKENPDLAFGLVDDVSPAK
EECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHCCCCEEEEECCCCCHHH
NVASLVFSEQEGSYLVGYLAGLNTSTGVVGFVGGMDVPLIHKFEAGYTAGVKAANPKARV
HHHHHHEECCCCCEEEEEEECCCCCCCEEEEECCCCCCEEEEECCCCCCCCCCCCCHHHH
IAQYVGTTPDAWNNPGKAKEIAASMRAKGADIIFAAAGASGNGVIDYVKQTQCLKANQLP
HHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCC
AGVKFGSDNFKNVPKSASYKQACAGNTRPLFFIGVDSNQNYLGDFDKNPATLNHGLTSMV
CCCEECCCCCCCCCCCCCHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHH
KRVDNAVFALIKDVKDNKFKGGERRFGLKEGGVGYAVDQYNKALIPSSQVAKVEAIKNQI
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEHHHCCCCCCCCHHHHHHHHHHHHH
ISGKIQVPSK
HCCEEECCCC
>Mature Secondary Structure
MKKGLTLALAAAVAASATLAAAQSTVRVGIAFDAGGKFDKSFNQSAWEGTQRAVKQLGVQ
CCCCHHHHHHHHHHHHHHHHHHHCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCE
VKDFEPSDPSQTVQGIRSFANSGFDLIIGVGFANNASITQVAKENPDLAFGLVDDVSPAK
EECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHCCCCEEEEECCCCCHHH
NVASLVFSEQEGSYLVGYLAGLNTSTGVVGFVGGMDVPLIHKFEAGYTAGVKAANPKARV
HHHHHHEECCCCCEEEEEEECCCCCCCEEEEECCCCCCEEEEECCCCCCCCCCCCCHHHH
IAQYVGTTPDAWNNPGKAKEIAASMRAKGADIIFAAAGASGNGVIDYVKQTQCLKANQLP
HHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCC
AGVKFGSDNFKNVPKSASYKQACAGNTRPLFFIGVDSNQNYLGDFDKNPATLNHGLTSMV
CCCEECCCCCCCCCCCCCHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHH
KRVDNAVFALIKDVKDNKFKGGERRFGLKEGGVGYAVDQYNKALIPSSQVAKVEAIKNQI
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEHHHCCCCCCCCHHHHHHHHHHHHH
ISGKIQVPSK
HCCEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11679669 [H]