Definition Deinococcus geothermalis DSM 11300, complete genome.
Accession NC_008025
Length 2,467,205

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The map label for this gene is bdbD [H]

Identifier: 94984799

GI number: 94984799

Start: 749932

End: 750618

Strand: Reverse

Name: bdbD [H]

Synonym: Dgeo_0692

Alternate gene names: 94984799

Gene position: 750618-749932 (Counterclockwise)

Preceding gene: 94984800

Following gene: 94984798

Centisome position: 30.42

GC content: 61.72

Gene sequence:

>687_bases
GTGACCAGACTTCAGGGAAGCAACCAGAACCGCACGGTCCTGGTGATCGGCACACTGATCGCCGCCTTGCTGATCGCCCT
CGCCCTCTTTGCCGCGCGCGGCAGGTCCAGCGGACAGACAGGAACCGCCAACTTCGACCTGACCGGACAGCCGGTCCTCG
GACAGGAGAACGCACCAGTAACGCTGGTGGTGTTTGAAGACTTCAAATGCCCCAACTGCAAGCGGTTTGAGGAAGAGTTC
ATGCCGGAACTCCGGTCGAAGTACATCGATACCGGCAAAGCCAAACTCATCTCTATGAACTTTCCCTTCATCGCCGCGAT
GAGCAATCTGCCCGTTGACGACAGCAAGCTGGCTGCCCAGGCTGCCGAATGCGCCTACCTGCAGGGAGGGAGCGAAGCGT
ACGACCGCATGAAGCAGATTCTCTTCCGCGCGCAGGGTGCAGAAAGCGAGGTGTGGGCCAGCAAGTCCCGCCTCAAGGAC
CTGGCCGGGAGCGTGGAAGGAATCGATCAAGCGAAGTTCAACACCTGTCTTGACAACGACGAGACCGCTGCTGCCGTCGA
GGCCGACAAGCAGCAGGCGGAGAAAGCAGGTGTGAGCGGCACCCCCTCGGTGTTCGTGAACGGCAAGCTGGTCAGCAGCT
ACGACGCCGCGACCGTCGGCGCCGCCATTGACGCGGCCAGCCGGTGA

Upstream 100 bases:

>100_bases
CCGGCCACCCCCCCTCAACCGGGCCGTCACAGCTGACCCTGAACCGCGCCGGGGCATCCGCCCGCGCCAAGGACCCGAGC
GGGCCGTTACACTTTGAGGC

Downstream 100 bases:

>100_bases
GGCCGGGGCATTGACTCGCGATAACCGCCTGTACCTCGCCTGGGTGGTGGCTCTCCTCGCCACGCTGGGCAGCCTGTGGT
TCAGTGAGGTACGCCAGTTT

Product: DSBA oxidoreductase

Products: NA

Alternate protein names: Disulfide oxidoreductase D; Thiol-disulfide oxidoreductase D [H]

Number of amino acids: Translated: 228; Mature: 227

Protein sequence:

>228_residues
MTRLQGSNQNRTVLVIGTLIAALLIALALFAARGRSSGQTGTANFDLTGQPVLGQENAPVTLVVFEDFKCPNCKRFEEEF
MPELRSKYIDTGKAKLISMNFPFIAAMSNLPVDDSKLAAQAAECAYLQGGSEAYDRMKQILFRAQGAESEVWASKSRLKD
LAGSVEGIDQAKFNTCLDNDETAAAVEADKQQAEKAGVSGTPSVFVNGKLVSSYDAATVGAAIDAASR

Sequences:

>Translated_228_residues
MTRLQGSNQNRTVLVIGTLIAALLIALALFAARGRSSGQTGTANFDLTGQPVLGQENAPVTLVVFEDFKCPNCKRFEEEF
MPELRSKYIDTGKAKLISMNFPFIAAMSNLPVDDSKLAAQAAECAYLQGGSEAYDRMKQILFRAQGAESEVWASKSRLKD
LAGSVEGIDQAKFNTCLDNDETAAAVEADKQQAEKAGVSGTPSVFVNGKLVSSYDAATVGAAIDAASR
>Mature_227_residues
TRLQGSNQNRTVLVIGTLIAALLIALALFAARGRSSGQTGTANFDLTGQPVLGQENAPVTLVVFEDFKCPNCKRFEEEFM
PELRSKYIDTGKAKLISMNFPFIAAMSNLPVDDSKLAAQAAECAYLQGGSEAYDRMKQILFRAQGAESEVWASKSRLKDL
AGSVEGIDQAKFNTCLDNDETAAAVEADKQQAEKAGVSGTPSVFVNGKLVSSYDAATVGAAIDAASR

Specific function: May be required for disulfide bond formation in some proteins [H]

COG id: COG1651

COG function: function code O; Protein-disulfide isomerase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the thioredoxin family. DsbA subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001853
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF01323 DSBA [H]

EC number: NA

Molecular weight: Translated: 24284; Mature: 24152

Theoretical pI: Translated: 4.78; Mature: 4.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRLQGSNQNRTVLVIGTLIAALLIALALFAARGRSSGQTGTANFDLTGQPVLGQENAPV
CCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCCCCE
TLVVFEDFKCPNCKRFEEEFMPELRSKYIDTGKAKLISMNFPFIAAMSNLPVDDSKLAAQ
EEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHCCCCCCHHHHHHH
AAECAYLQGGSEAYDRMKQILFRAQGAESEVWASKSRLKDLAGSVEGIDQAKFNTCLDND
HHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCC
ETAAAVEADKQQAEKAGVSGTPSVFVNGKLVSSYDAATVGAAIDAASR
CCHHHHHHHHHHHHHCCCCCCCCEEECCEEECCCCHHHHHHHHHCCCC
>Mature Secondary Structure 
TRLQGSNQNRTVLVIGTLIAALLIALALFAARGRSSGQTGTANFDLTGQPVLGQENAPV
CCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCCCCE
TLVVFEDFKCPNCKRFEEEFMPELRSKYIDTGKAKLISMNFPFIAAMSNLPVDDSKLAAQ
EEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHCCCCCCHHHHHHH
AAECAYLQGGSEAYDRMKQILFRAQGAESEVWASKSRLKDLAGSVEGIDQAKFNTCLDND
HHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCC
ETAAAVEADKQQAEKAGVSGTPSVFVNGKLVSSYDAATVGAAIDAASR
CCHHHHHHHHHHHHHCCCCCCCCEEECCEEECCCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12721629 [H]