| Definition | Deinococcus geothermalis DSM 11300, complete genome. |
|---|---|
| Accession | NC_008025 |
| Length | 2,467,205 |
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The map label for this gene is 94984793
Identifier: 94984793
GI number: 94984793
Start: 742795
End: 744816
Strand: Reverse
Name: 94984793
Synonym: Dgeo_0686
Alternate gene names: NA
Gene position: 744816-742795 (Counterclockwise)
Preceding gene: 94984794
Following gene: 94984792
Centisome position: 30.19
GC content: 68.3
Gene sequence:
>2022_bases ATGCGCCGCTCTCTCCTCCTCTCTGCCCTCCTCCTCTCCCCCGTTCGCGCCGCTCCCCTCCCCGTCACCCCGGTCCCGGA TGCCAGGCTGACCGCCCCCCGTGCCGATCTCGTGCCGCCGCCACAAAGGGCGGAGTTTCCCGCCGGCACGCTGCCGCTCG CGGGCCTCGGTGTCAAGGTGGTGGGGAATGCCCCCGAACTGGCCTGGGCCGTCCGTGACCTGCGCGAGGAATGGCACACG CGGCTGGGTGCCACGCTCCCCGACAGTGGCCAGACACCCATCGTGATCGGCACGCGGGCTGATGCTGACCTGGCGGCAAA AGCGGAAGCGGCGGGCCTTTCCACCACAGCGCCGGAGAGCTACGCGCTGTGGGTGGACGGCACGGGCGCCTATGTGGTGG GGGCGGATGCTCGGGGAGCGTACCACGGTGCACAGACCCTGCGTCAGCTGCTCACACCGAGCGGCCTGCGCTTTGCCCGC ATTCAGGACGCGCCCGCCCTCGCGCAGCGCGTGGCGATGCTGTACCTCGACGCGTCAAGTCCGAGCGTGAATGACCGCCT GATCCCGCTGCTGGCCCAGCTCAAATACAACGCGGTCCTGGTGATGAGTGACTACGTGCAGTGGGACGTGGCGAGAGCGG GCGGCTGGGCGCACCCGGGCGGCGCGACGAAGGCGGAGGCGGCCCGGGTGGCGCAGCTCGCGCGCCAGCACGGGCTGGAG GTCATTCCGCTGATCGAGACCCTGGGGCACACAAGCTGGATGTTCCAGGGCGGCAAGAACCTCGATCTGATGCAGGATCC CGCCTCGCAAAACCCCTTCGCCTACGACACCCTGAACCCCCAGACCTATGAGCGGGTGGTCTTTCCGGTGCTGCGCGAGG CCATCGAAGTCTTCCGGCCGAAGGTCATTCACATCGGGCACGACGAGGTGAGAAACCGTGACCGCTTCCCGGCCCGCGAG AACGGCAAGGCTGTGGGCTTCGAGCAGCTGTTTGTGGACGATACCCTGAAGCTGCACGACTTCCTGAAGTCGCAGAACGT CGGCACGATGATCTGGCACGACGTCGCCTTCGCAGACAGCCTGGTCGGAACGCTGCCCGCGCGGCTCCCCAAGGACATTC AGGTCGCCTACTGGAACTACACGGCGGACACCAACGCCGATACCCTGCGCCGCATTCGGGCGCTGGGCTTCCCGGTGCTG GGTGCGTCTTGGTCCGAACCCGGCAACGCGGAGGGCCTGAGCCGCGCCGCCGTGCAGGCAGGAGCGGTCGGTATGATCCA GACACGCTGGTCGGGCTACTTCGGCAACCCGAGCATCTGGGACGGCATGGCCGAGCAGGGCGTGGCGCTGGTGCGTGCGG GCGCCAGCTTCTGGAACCCGGCAGGCCCGGTGGTCAAGGGGGCCGACGCGCTGTACCGCGACCTGTACGCGCCGAGCGCC TACCGCCAGACAGCGGGCGCGCTTGTCAACCTCGCGCCGCTGGTGACCCGCCAGCTCACCGATGAGGACGGCCGGGGGTG GATCGGGAAGGGGCCGGACACCGATCTGCGGAACCTGGGGAGCGGCAACCTGCGGATCGGGAACTACCGCTTTGACGTAC GCGGTGCGGTGATGCTGCGTGGAAGCCGGGCGGCGGTGAGGGACCTACCGGAGCGCGTCACCCTCGAGCTGGGGCGCAAG GCAGACGCCCTCGCCTTCCTGCACACCACCGGCTGGCCTGCTCCCACCAACCGTGAGGTGATCGGGCGCTATGAGATCCG GTACGCGGATGGCAGCGTGCTGAACCAACCGCTCGAATACGGCCGGCACATTCGCGCCTGGACGGACACCCTGCCAAGCA GCATGATCGTTTCGCCGGGCTGGGTGGGCAAAACACGCGACGGGCTGGACGTGAACGTGCCCATTCTGGAGTGGACCAAC CCCAAACCGGGTGTCGCGATCCAGAGCGTCACCCTGATCAGCGAAGGCAAGAGCGCGAACCCGACACTGCTCGGCCTAAC CTTGCTCGGCGGGGGAAAATAG
Upstream 100 bases:
>100_bases CTACCCGAACCGACCGGCCGCGCTTTTTCCCTCTCCCGGTTCAGGAAAACCAGTTCGAGGTGGCCGCCGCAGACGGCCCT TTCTCTCCGCGAGGTTCCCT
Downstream 100 bases:
>100_bases CGCCATTCAAAGGTGATCTCATGGCGGGCAAGCGGCTACCCCACGACAAGCAGGATTGGTTGTGCGCTTGTCGTATGCAA ACTTCCTTCCCTCCTCACCT
Product: glycoside hydrolase family protein
Products: NA
Alternate protein names: Glycoside Hydrolase Family; Glycoside Hydrolase; Family; Beta-N-Acetylhexosaminidase; Secreted Hydrolase; Lacto-N-Biosidase; Glycosyl Hydrolase Family; NagZ Beta-N-Acetylhexosaminidase
Number of amino acids: Translated: 673; Mature: 673
Protein sequence:
>673_residues MRRSLLLSALLLSPVRAAPLPVTPVPDARLTAPRADLVPPPQRAEFPAGTLPLAGLGVKVVGNAPELAWAVRDLREEWHT RLGATLPDSGQTPIVIGTRADADLAAKAEAAGLSTTAPESYALWVDGTGAYVVGADARGAYHGAQTLRQLLTPSGLRFAR IQDAPALAQRVAMLYLDASSPSVNDRLIPLLAQLKYNAVLVMSDYVQWDVARAGGWAHPGGATKAEAARVAQLARQHGLE VIPLIETLGHTSWMFQGGKNLDLMQDPASQNPFAYDTLNPQTYERVVFPVLREAIEVFRPKVIHIGHDEVRNRDRFPARE NGKAVGFEQLFVDDTLKLHDFLKSQNVGTMIWHDVAFADSLVGTLPARLPKDIQVAYWNYTADTNADTLRRIRALGFPVL GASWSEPGNAEGLSRAAVQAGAVGMIQTRWSGYFGNPSIWDGMAEQGVALVRAGASFWNPAGPVVKGADALYRDLYAPSA YRQTAGALVNLAPLVTRQLTDEDGRGWIGKGPDTDLRNLGSGNLRIGNYRFDVRGAVMLRGSRAAVRDLPERVTLELGRK ADALAFLHTTGWPAPTNREVIGRYEIRYADGSVLNQPLEYGRHIRAWTDTLPSSMIVSPGWVGKTRDGLDVNVPILEWTN PKPGVAIQSVTLISEGKSANPTLLGLTLLGGGK
Sequences:
>Translated_673_residues MRRSLLLSALLLSPVRAAPLPVTPVPDARLTAPRADLVPPPQRAEFPAGTLPLAGLGVKVVGNAPELAWAVRDLREEWHT RLGATLPDSGQTPIVIGTRADADLAAKAEAAGLSTTAPESYALWVDGTGAYVVGADARGAYHGAQTLRQLLTPSGLRFAR IQDAPALAQRVAMLYLDASSPSVNDRLIPLLAQLKYNAVLVMSDYVQWDVARAGGWAHPGGATKAEAARVAQLARQHGLE VIPLIETLGHTSWMFQGGKNLDLMQDPASQNPFAYDTLNPQTYERVVFPVLREAIEVFRPKVIHIGHDEVRNRDRFPARE NGKAVGFEQLFVDDTLKLHDFLKSQNVGTMIWHDVAFADSLVGTLPARLPKDIQVAYWNYTADTNADTLRRIRALGFPVL GASWSEPGNAEGLSRAAVQAGAVGMIQTRWSGYFGNPSIWDGMAEQGVALVRAGASFWNPAGPVVKGADALYRDLYAPSA YRQTAGALVNLAPLVTRQLTDEDGRGWIGKGPDTDLRNLGSGNLRIGNYRFDVRGAVMLRGSRAAVRDLPERVTLELGRK ADALAFLHTTGWPAPTNREVIGRYEIRYADGSVLNQPLEYGRHIRAWTDTLPSSMIVSPGWVGKTRDGLDVNVPILEWTN PKPGVAIQSVTLISEGKSANPTLLGLTLLGGGK >Mature_673_residues MRRSLLLSALLLSPVRAAPLPVTPVPDARLTAPRADLVPPPQRAEFPAGTLPLAGLGVKVVGNAPELAWAVRDLREEWHT RLGATLPDSGQTPIVIGTRADADLAAKAEAAGLSTTAPESYALWVDGTGAYVVGADARGAYHGAQTLRQLLTPSGLRFAR IQDAPALAQRVAMLYLDASSPSVNDRLIPLLAQLKYNAVLVMSDYVQWDVARAGGWAHPGGATKAEAARVAQLARQHGLE VIPLIETLGHTSWMFQGGKNLDLMQDPASQNPFAYDTLNPQTYERVVFPVLREAIEVFRPKVIHIGHDEVRNRDRFPARE NGKAVGFEQLFVDDTLKLHDFLKSQNVGTMIWHDVAFADSLVGTLPARLPKDIQVAYWNYTADTNADTLRRIRALGFPVL GASWSEPGNAEGLSRAAVQAGAVGMIQTRWSGYFGNPSIWDGMAEQGVALVRAGASFWNPAGPVVKGADALYRDLYAPSA YRQTAGALVNLAPLVTRQLTDEDGRGWIGKGPDTDLRNLGSGNLRIGNYRFDVRGAVMLRGSRAAVRDLPERVTLELGRK ADALAFLHTTGWPAPTNREVIGRYEIRYADGSVLNQPLEYGRHIRAWTDTLPSSMIVSPGWVGKTRDGLDVNVPILEWTN PKPGVAIQSVTLISEGKSANPTLLGLTLLGGGK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 72728; Mature: 72728
Theoretical pI: Translated: 9.16; Mature: 9.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRSLLLSALLLSPVRAAPLPVTPVPDARLTAPRADLVPPPQRAEFPAGTLPLAGLGVKV CCHHHHHHHHHHCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE VGNAPELAWAVRDLREEWHTRLGATLPDSGQTPIVIGTRADADLAAKAEAAGLSTTAPES ECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCHHHHHHHCCCCCCCCCC YALWVDGTGAYVVGADARGAYHGAQTLRQLLTPSGLRFARIQDAPALAQRVAMLYLDASS EEEEECCCCCEEEECCCCCCHHHHHHHHHHHCCCCCEEEEECCCHHHHHHEEEEEEECCC PSVNDRLIPLLAQLKYNAVLVMSDYVQWDVARAGGWAHPGGATKAEAARVAQLARQHGLE CCCCCHHHHHHHHHCCCEEEEEECCHHEEHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCE VIPLIETLGHTSWMFQGGKNLDLMQDPASQNPFAYDTLNPQTYERVVFPVLREAIEVFRP EEEHHHHCCCCEEEECCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHCC KVIHIGHDEVRNRDRFPARENGKAVGFEQLFVDDTLKLHDFLKSQNVGTMIWHDVAFADS EEEEECCHHHCCCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHCCCCCEEEHHHHHHHHH LVGTLPARLPKDIQVAYWNYTADTNADTLRRIRALGFPVLGASWSEPGNAEGLSRAAVQA HHHHHHHCCCCCEEEEEEEEECCCCHHHHHHHHHHCCCEECCCCCCCCCCCHHHHHHHHH GAVGMIQTRWSGYFGNPSIWDGMAEQGVALVRAGASFWNPAGPVVKGADALYRDLYAPSA CCCEEEEEECCCCCCCCHHHCCHHHCCEEEEECCCCCCCCCCCCCCCHHHHHHHHCCCHH YRQTAGALVNLAPLVTRQLTDEDGRGWIGKGPDTDLRNLGSGNLRIGNYRFDVRGAVMLR HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCCEEEEEEEEEEEEEEEEE GSRAAVRDLPERVTLELGRKADALAFLHTTGWPAPTNREVIGRYEIRYADGSVLNQPLEY CCHHHHHHCHHHHHHHHCCCCCEEEEEEECCCCCCCCCCEEEEEEEEECCCHHHHHHHHH GRHIRAWTDTLPSSMIVSPGWVGKTRDGLDVNVPILEWTNPKPGVAIQSVTLISEGKSAN CCEEEHHHHCCCCCEEECCCCCCCCCCCCEEEEEEEEECCCCCCEEEEEEEEEECCCCCC PTLLGLTLLGGGK CEEEEEEEECCCC >Mature Secondary Structure MRRSLLLSALLLSPVRAAPLPVTPVPDARLTAPRADLVPPPQRAEFPAGTLPLAGLGVKV CCHHHHHHHHHHCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE VGNAPELAWAVRDLREEWHTRLGATLPDSGQTPIVIGTRADADLAAKAEAAGLSTTAPES ECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCHHHHHHHCCCCCCCCCC YALWVDGTGAYVVGADARGAYHGAQTLRQLLTPSGLRFARIQDAPALAQRVAMLYLDASS EEEEECCCCCEEEECCCCCCHHHHHHHHHHHCCCCCEEEEECCCHHHHHHEEEEEEECCC PSVNDRLIPLLAQLKYNAVLVMSDYVQWDVARAGGWAHPGGATKAEAARVAQLARQHGLE CCCCCHHHHHHHHHCCCEEEEEECCHHEEHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCE VIPLIETLGHTSWMFQGGKNLDLMQDPASQNPFAYDTLNPQTYERVVFPVLREAIEVFRP EEEHHHHCCCCEEEECCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHCC KVIHIGHDEVRNRDRFPARENGKAVGFEQLFVDDTLKLHDFLKSQNVGTMIWHDVAFADS EEEEECCHHHCCCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHCCCCCEEEHHHHHHHHH LVGTLPARLPKDIQVAYWNYTADTNADTLRRIRALGFPVLGASWSEPGNAEGLSRAAVQA HHHHHHHCCCCCEEEEEEEEECCCCHHHHHHHHHHCCCEECCCCCCCCCCCHHHHHHHHH GAVGMIQTRWSGYFGNPSIWDGMAEQGVALVRAGASFWNPAGPVVKGADALYRDLYAPSA CCCEEEEEECCCCCCCCHHHCCHHHCCEEEEECCCCCCCCCCCCCCCHHHHHHHHCCCHH YRQTAGALVNLAPLVTRQLTDEDGRGWIGKGPDTDLRNLGSGNLRIGNYRFDVRGAVMLR HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCCEEEEEEEEEEEEEEEEE GSRAAVRDLPERVTLELGRKADALAFLHTTGWPAPTNREVIGRYEIRYADGSVLNQPLEY CCHHHHHHCHHHHHHHHCCCCCEEEEEEECCCCCCCCCCEEEEEEEEECCCHHHHHHHHH GRHIRAWTDTLPSSMIVSPGWVGKTRDGLDVNVPILEWTNPKPGVAIQSVTLISEGKSAN CCEEEHHHHCCCCCEEECCCCCCCCCCCCEEEEEEEEECCCCCCEEEEEEEEEECCCCCC PTLLGLTLLGGGK CEEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA