| Definition | Deinococcus geothermalis DSM 11300, complete genome. |
|---|---|
| Accession | NC_008025 |
| Length | 2,467,205 |
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The map label for this gene is tetA [H]
Identifier: 94984786
GI number: 94984786
Start: 737086
End: 738159
Strand: Reverse
Name: tetA [H]
Synonym: Dgeo_0679
Alternate gene names: 94984786
Gene position: 738159-737086 (Counterclockwise)
Preceding gene: 94984787
Following gene: 228964358
Centisome position: 29.92
GC content: 73.09
Gene sequence:
>1074_bases GTGCCCGCCATGCAGGCCCATTTCGCTGGGCTGGCGAACGCCGACGTGCTGGTCCGGCTGACGGTGACGGTGGTGGGCCT TGCCATCGCGGTCAGTGCGCCCGTCAGCGGATACCTCACCGACCGAATTGGGCGCCGACCCGTGCTGGTCGGCGCCATGC TGCTGTATGCCCTGGCCGGATCGAGCGGCCTGTACGCCCCGACCCTGGGGACGCTGCTGCTGGGGCGGGTGCTGCTGGGG CTGGCGGTGGGAGCCACCATGACGGCGGGCTCGGCACTGGTGGCGGACCTGTTCGCCGGGCAGGAACGGGCACGTTTCCT GGGGCTGCAGAGCGCCTTTACCAGTCTGGGCGGCGTGATCTTCCTGCCGCTGGGGGGACTGCTGGCGGGCATCGGCTGGC GGCTGCCCTTCGCGGTGTACCTGGCGGCCCTCCTGCTGGTGCCGCTGGCGCTGCGGCTGCCGCGCGGGGAGACGGCGGGG GAGCGGCGGGCGGAGGTGGCGGCGGAGCGGATTCCGTGGCGCCCGGTCGCGCTGGCCTACGGGGTGGCGCTCTCGTACAT GCTGGTCTACTACCTGATGCCCACCCAGATCCCCTACCGATTGGAGGGCCTCGGTGTGGCCCCGGCGCTGGTGGGGTTCG TCATGGGCGTCAGCACACTTTCGGGCGCGCTCGCGGCGCTGTGGTTCTCCCGGCGCGGCGGCACCCGGACGCCCATCCGA ATGGCAGGCCTCAGCTTGCTGGCGCTGGCGGTCGGGTGGACGGTGGTGAGCCTCGCGCCGGGGGCCGGGTGGGTGGTGCC GGGCCTGATCATCGGCGGGGCGGGGGCCGGTCTGGTCACGCCCAACCTGAACACCTTCCTGGCCGCCCTGGCCCCGGCCC ATGCCCGCGGACGGGTGATGAGCGGGCTGTCAGTCAGCATCTTTCTCGGGCAGTTCCTGTCGCCGCTGCTCGCGCGGCCC TTCGTCCACGGCACCGACGTAAGCCGGACCTTCGCCGCCGCGGCGACCTTCGCGGTCCTGGTGGGGACGGCGCTGCTGCT GCTGGGACGCAGGCGAGCGGCGCTGGCGGGCTAA
Upstream 100 bases:
>100_bases ATGGAGTAAAGGTGCGCGAGGCGCAAGTTTCGCACACAGACTCCAACCTCGTAAGCCCCGCGTAGGGGAACCCCCGGTCT TCAGGCCGGGGAGGATGTCA
Downstream 100 bases:
>100_bases TCTTCCTTTACACTTGTTATCCCTATGCCAGCTCTACTTTTCACGTGCTACCTTCTTACCATGATTGTGGTGAAGGTGGG CGGAAGCGCCGGAATCGATT
Product: major facilitator transporter
Products: Proton [Cytoplasm]; drug [Periplasm] [C]
Alternate protein names: TetA(C) [H]
Number of amino acids: Translated: 357; Mature: 356
Protein sequence:
>357_residues MPAMQAHFAGLANADVLVRLTVTVVGLAIAVSAPVSGYLTDRIGRRPVLVGAMLLYALAGSSGLYAPTLGTLLLGRVLLG LAVGATMTAGSALVADLFAGQERARFLGLQSAFTSLGGVIFLPLGGLLAGIGWRLPFAVYLAALLLVPLALRLPRGETAG ERRAEVAAERIPWRPVALAYGVALSYMLVYYLMPTQIPYRLEGLGVAPALVGFVMGVSTLSGALAALWFSRRGGTRTPIR MAGLSLLALAVGWTVVSLAPGAGWVVPGLIIGGAGAGLVTPNLNTFLAALAPAHARGRVMSGLSVSIFLGQFLSPLLARP FVHGTDVSRTFAAAATFAVLVGTALLLLGRRRAALAG
Sequences:
>Translated_357_residues MPAMQAHFAGLANADVLVRLTVTVVGLAIAVSAPVSGYLTDRIGRRPVLVGAMLLYALAGSSGLYAPTLGTLLLGRVLLG LAVGATMTAGSALVADLFAGQERARFLGLQSAFTSLGGVIFLPLGGLLAGIGWRLPFAVYLAALLLVPLALRLPRGETAG ERRAEVAAERIPWRPVALAYGVALSYMLVYYLMPTQIPYRLEGLGVAPALVGFVMGVSTLSGALAALWFSRRGGTRTPIR MAGLSLLALAVGWTVVSLAPGAGWVVPGLIIGGAGAGLVTPNLNTFLAALAPAHARGRVMSGLSVSIFLGQFLSPLLARP FVHGTDVSRTFAAAATFAVLVGTALLLLGRRRAALAG >Mature_356_residues PAMQAHFAGLANADVLVRLTVTVVGLAIAVSAPVSGYLTDRIGRRPVLVGAMLLYALAGSSGLYAPTLGTLLLGRVLLGL AVGATMTAGSALVADLFAGQERARFLGLQSAFTSLGGVIFLPLGGLLAGIGWRLPFAVYLAALLLVPLALRLPRGETAGE RRAEVAAERIPWRPVALAYGVALSYMLVYYLMPTQIPYRLEGLGVAPALVGFVMGVSTLSGALAALWFSRRGGTRTPIRM AGLSLLALAVGWTVVSLAPGAGWVVPGLIIGGAGAGLVTPNLNTFLAALAPAHARGRVMSGLSVSIFLGQFLSPLLARPF VHGTDVSRTFAAAATFAVLVGTALLLLGRRRAALAG
Specific function: Resistance to tetracycline by an active tetracycline efflux. This is an energy-dependent process that decreases the accumulation of the antibiotic in whole cells. This protein functions as a metal-tetracycline/H(+) antiporter [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. TCR/tet family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6324264, Length=160, Percent_Identity=30, Blast_Score=65, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR005829 - InterPro: IPR001958 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 36656; Mature: 36525
Theoretical pI: Translated: 11.99; Mature: 11.99
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAMQAHFAGLANADVLVRLTVTVVGLAIAVSAPVSGYLTDRIGRRPVLVGAMLLYALAG CCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHC SSGLYAPTLGTLLLGRVLLGLAVGATMTAGSALVADLFAGQERARFLGLQSAFTSLGGVI CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCEE FLPLGGLLAGIGWRLPFAVYLAALLLVPLALRLPRGETAGERRAEVAAERIPWRPVALAY EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHH GVALSYMLVYYLMPTQIPYRLEGLGVAPALVGFVMGVSTLSGALAALWFSRRGGTRTPIR HHHHHHHHHHHHHCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH MAGLSLLALAVGWTVVSLAPGAGWVVPGLIIGGAGAGLVTPNLNTFLAALAPAHARGRVM HHHHHHHHHHHHHHHEEECCCCCCHHHHHEECCCCCCCCCCCHHHHHHHHCCHHHHHHHH SGLSVSIFLGQFLSPLLARPFVHGTDVSRTFAAAATFAVLVGTALLLLGRRRAALAG CCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCC >Mature Secondary Structure PAMQAHFAGLANADVLVRLTVTVVGLAIAVSAPVSGYLTDRIGRRPVLVGAMLLYALAG CCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHC SSGLYAPTLGTLLLGRVLLGLAVGATMTAGSALVADLFAGQERARFLGLQSAFTSLGGVI CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCEE FLPLGGLLAGIGWRLPFAVYLAALLLVPLALRLPRGETAGERRAEVAAERIPWRPVALAY EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHH GVALSYMLVYYLMPTQIPYRLEGLGVAPALVGFVMGVSTLSGALAALWFSRRGGTRTPIR HHHHHHHHHHHHHCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH MAGLSLLALAVGWTVVSLAPGAGWVVPGLIIGGAGAGLVTPNLNTFLAALAPAHARGRVM HHHHHHHHHHHHHHHEEECCCCCCHHHHHEECCCCCCCCCCCHHHHHHHHCCHHHHHHHH SGLSVSIFLGQFLSPLLARPFVHGTDVSRTFAAAATFAVLVGTALLLLGRRRAALAG CCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; drug [Cytoplasm] [C]
Specific reaction: Proton [Periplasm] + drug [Cytoplasm] = Proton [Cytoplasm] + drug [Periplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 383387; 6337373; 6307828; 1517220 [H]