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The map label for this gene is betI [H]

Identifier: 94984765

GI number: 94984765

Start: 713772

End: 714359

Strand: Reverse

Name: betI [H]

Synonym: Dgeo_0658

Alternate gene names: 94984765

Gene position: 714359-713772 (Counterclockwise)

Preceding gene: 94984766

Following gene: 94984763

Centisome position: 28.95

GC content: 69.22

Gene sequence:

>588_bases
ATGGCGCGGCGGGTCAATCCCATTCAGGATCGGGTCCGGCGTGCGGCGCTGGAGAAAGCCGCGTATCTCGCCATCTATGA
GCGAGGGTATGCGGGCGTGACGCTGGCGGATATCGCGCGCCACGCGGGGGTCAGCAAGGGGACACTCGCCTATCACTTCG
GAAGCCGCGCGGGGCTCCTCGCGGCGGTGATGCGCCGCTTTACCCGCACCATCACCGTCGCCACGCGCCGCGCGCTGCGC
CAGGCAGCCACCCCCGAGGCCAAGCTACGCGCCTACGTCGAGAACCAGTTCTACGGAGTGGACAACACCCGCCGCTTTTC
CACAGTGTCTCTAGACTTCTTGGCCGCCGCGACCCGTGACCCCGAATTGATGGCCGTGCAGCGCGACTTTCAGCGCGAGA
CGCTCACCCTTGACCTCGAACTCGCGCGCCTGGCCGGCGAGGCAGGCGCCGAGGAGCGGGCGCGGCTGCTGCGGGCGCTG
GTCGAAGGCCTCAGCGTGCGCTTTCTGGCCGATCCTGCCCCCGATCTGGCCGCCTACCGCGCAGAGTGCCTGCGGGGGCT
GCGGGCGATTCTGGGGTGGAAGGACTAG

Upstream 100 bases:

>100_bases
CCGATGCCTATGCAGCGCTGGAAGGCGTGTTGCGGTTGCCGGGATAGGGTAGGGACGAGTTGAAGACCTTCACGCCCCGC
CGCCTGCTACCCTGCCCCTG

Downstream 100 bases:

>100_bases
ACCCCCCGTAACCTCCGTAAAGCCGCCGCGATCTGCCGCGCACCCTCGATCAAACGGGGGCCGGGGCGCCCCAGACCGCT
TTCGAGCACGCCGACGACCG

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 195; Mature: 194

Protein sequence:

>195_residues
MARRVNPIQDRVRRAALEKAAYLAIYERGYAGVTLADIARHAGVSKGTLAYHFGSRAGLLAAVMRRFTRTITVATRRALR
QAATPEAKLRAYVENQFYGVDNTRRFSTVSLDFLAAATRDPELMAVQRDFQRETLTLDLELARLAGEAGAEERARLLRAL
VEGLSVRFLADPAPDLAAYRAECLRGLRAILGWKD

Sequences:

>Translated_195_residues
MARRVNPIQDRVRRAALEKAAYLAIYERGYAGVTLADIARHAGVSKGTLAYHFGSRAGLLAAVMRRFTRTITVATRRALR
QAATPEAKLRAYVENQFYGVDNTRRFSTVSLDFLAAATRDPELMAVQRDFQRETLTLDLELARLAGEAGAEERARLLRAL
VEGLSVRFLADPAPDLAAYRAECLRGLRAILGWKD
>Mature_194_residues
ARRVNPIQDRVRRAALEKAAYLAIYERGYAGVTLADIARHAGVSKGTLAYHFGSRAGLLAAVMRRFTRTITVATRRALRQ
AATPEAKLRAYVENQFYGVDNTRRFSTVSLDFLAAATRDPELMAVQRDFQRETLTLDLELARLAGEAGAEERARLLRALV
EGLSVRFLADPAPDLAAYRAECLRGLRAILGWKD

Specific function: Repressor involved in choline regulation of the bet genes [H]

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH tetR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR015893
- InterPro:   IPR011075
- InterPro:   IPR017757
- InterPro:   IPR001647 [H]

Pfam domain/function: PF00440 TetR_N [H]

EC number: NA

Molecular weight: Translated: 21679; Mature: 21548

Theoretical pI: Translated: 10.74; Mature: 10.74

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARRVNPIQDRVRRAALEKAAYLAIYERGYAGVTLADIARHAGVSKGTLAYHFGSRAGLL
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCEEEEECCCCHHHH
AAVMRRFTRTITVATRRALRQAATPEAKLRAYVENQFYGVDNTRRFSTVSLDFLAAATRD
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHEECCCCCCCEEHHHHHHHHHCCCC
PELMAVQRDFQRETLTLDLELARLAGEAGAEERARLLRALVEGLSVRFLADPAPDLAAYR
CHHHHHHHHHCHHHEEEHHHHHHHHCCCCHHHHHHHHHHHHHCCEEEEECCCCCHHHHHH
AECLRGLRAILGWKD
HHHHHHHHHHHCCCC
>Mature Secondary Structure 
ARRVNPIQDRVRRAALEKAAYLAIYERGYAGVTLADIARHAGVSKGTLAYHFGSRAGLL
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCEEEEECCCCHHHH
AAVMRRFTRTITVATRRALRQAATPEAKLRAYVENQFYGVDNTRRFSTVSLDFLAAATRD
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHEECCCCCCCEEHHHHHHHHHCCCC
PELMAVQRDFQRETLTLDLELARLAGEAGAEERARLLRALVEGLSVRFLADPAPDLAAYR
CHHHHHHHHHCHHHEEEHHHHHHHHCCCCHHHHHHHHHHHHHCCEEEEECCCCCHHHHHH
AECLRGLRAILGWKD
HHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10708384 [H]