| Definition | Deinococcus geothermalis DSM 11300, complete genome. |
|---|---|
| Accession | NC_008025 |
| Length | 2,467,205 |
Click here to switch to the map view.
The map label for this gene is secE
Identifier: 94984751
GI number: 94984751
Start: 697975
End: 698154
Strand: Reverse
Name: secE
Synonym: Dgeo_0644
Alternate gene names: NA
Gene position: 698154-697975 (Counterclockwise)
Preceding gene: 94984752
Following gene: 94984750
Centisome position: 28.3
GC content: 60.0
Gene sequence:
>180_bases ATGAATCTGATGCAGTACTTGCGGGACTCGCGCGAAGAGCTGGCGCGGGTCACCTGGCCGACGCGCCAGCAGGTGATCGA CGGCACGCAGGCGGTGCTGATCTTCGTGATCGCCCTGACCCTGATTGTGTTCGTGATGGATTTTGTGTTTGGCCATCTGA TTCGGGCGGTGCTGGCATGA
Upstream 100 bases:
>100_bases AGGAGAAAAAGGTCTGATTCCGGTAGGGGCATCCGCGAGGGTGTCCCGGCGCGGCATTGGGCGTTTTCTTTTTTGATGTG AGGCGGGGGAAGGTGAGCGC
Downstream 100 bases:
>100_bases GTATTGAGTGGTACGCCGTCCATACGTATGTCGGCCAAGAAGACCGCGTGGAACAGCACCTGCTGGAGCGGGCCAAAAAA CTCGGCATGCTGCACACCAA
Product: preprotein translocase subunit SecE
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 59; Mature: 59
Protein sequence:
>59_residues MNLMQYLRDSREELARVTWPTRQQVIDGTQAVLIFVIALTLIVFVMDFVFGHLIRAVLA
Sequences:
>Translated_59_residues MNLMQYLRDSREELARVTWPTRQQVIDGTQAVLIFVIALTLIVFVMDFVFGHLIRAVLA >Mature_59_residues MNLMQYLRDSREELARVTWPTRQQVIDGTQAVLIFVIALTLIVFVMDFVFGHLIRAVLA
Specific function: Unknown
COG id: COG0690
COG function: function code U; Preprotein translocase subunit SecE
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6820; Mature: 6820
Theoretical pI: Translated: 7.54; Mature: 7.54
Prosite motif: PS01067 SECE_SEC61G
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLMQYLRDSREELARVTWPTRQQVIDGTQAVLIFVIALTLIVFVMDFVFGHLIRAVLA CCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure MNLMQYLRDSREELARVTWPTRQQVIDGTQAVLIFVIALTLIVFVMDFVFGHLIRAVLA CCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA