| Definition | Deinococcus geothermalis DSM 11300, complete genome. |
|---|---|
| Accession | NC_008025 |
| Length | 2,467,205 |
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The map label for this gene is 94984715
Identifier: 94984715
GI number: 94984715
Start: 649836
End: 650336
Strand: Reverse
Name: 94984715
Synonym: Dgeo_0608
Alternate gene names: NA
Gene position: 650336-649836 (Counterclockwise)
Preceding gene: 94984716
Following gene: 94984711
Centisome position: 26.36
GC content: 68.46
Gene sequence:
>501_bases ATGGCGCGGCGTGACCTGCTGGTGGCGGCAGGCGTGCTGCGGGATAAATTCGGGCGAGTGCTGCTGGTCGGGAACGACTG GCAGGGGTTGGGCCGCGTGCGCCACACCCTGCCCGGCGGCGTGGTCGAACCCGGTGAGACCTTGCTTGAAGCCCTCTACC GCGAGATCGCAGAGGAAACTGGCCTCAAGCTCACCGGGATCAAGCAGATGGCCTACACCGTTCATATCGAGGACGAGCGC CGGGGCGAGCGGGCCATCGCGGTCGCCTTTGAGGCCACCTGGGAAGGGCTCCTGAACCCCTCCGACCCCGACGGCTTCAT CGTGGAAGCCCGCTTCTGCCCCCCTGACGAGGCGGTGGAGCTGCTGGAATCCCCCCCGATGCGCGAGCCGCTGCATGACT ACCTGCGAACCGGCGAGCCAGGCCGCTTCTACGCTTTCAAAGGCTGGGACGGGCGCGGCGGGCTACGGGTGCCCCCCCTT CGGGCCGAGTCATCCCGCTGA
Upstream 100 bases:
>100_bases ATGGCGGGCGGTCTCGCGCCGATTGTGGCGGCCTTGAGCCGCGACGAGCGCGAACGGCAACTCCTGGAGCTGCAAGGGGC AGAAGGCGAACGGGGCACCT
Downstream 100 bases:
>100_bases GGGCCATCTCCTCGCACAACTCGGCCCGCGCCCGTTTAAAGCTGCTGAACCAGAATGGGCGTGGTCGTGGGCTGCGGGCT GCCCCCGGGCGGCTCGACGC
Product: NUDIX hydrolase
Products: NA
Alternate protein names: MutT/Nudix Family Protein; Nudix Hydrolase
Number of amino acids: Translated: 166; Mature: 165
Protein sequence:
>166_residues MARRDLLVAAGVLRDKFGRVLLVGNDWQGLGRVRHTLPGGVVEPGETLLEALYREIAEETGLKLTGIKQMAYTVHIEDER RGERAIAVAFEATWEGLLNPSDPDGFIVEARFCPPDEAVELLESPPMREPLHDYLRTGEPGRFYAFKGWDGRGGLRVPPL RAESSR
Sequences:
>Translated_166_residues MARRDLLVAAGVLRDKFGRVLLVGNDWQGLGRVRHTLPGGVVEPGETLLEALYREIAEETGLKLTGIKQMAYTVHIEDER RGERAIAVAFEATWEGLLNPSDPDGFIVEARFCPPDEAVELLESPPMREPLHDYLRTGEPGRFYAFKGWDGRGGLRVPPL RAESSR >Mature_165_residues ARRDLLVAAGVLRDKFGRVLLVGNDWQGLGRVRHTLPGGVVEPGETLLEALYREIAEETGLKLTGIKQMAYTVHIEDERR GERAIAVAFEATWEGLLNPSDPDGFIVEARFCPPDEAVELLESPPMREPLHDYLRTGEPGRFYAFKGWDGRGGLRVPPLR AESSR
Specific function: Unknown
COG id: COG1051
COG function: function code F; ADP-ribose pyrophosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18508; Mature: 18377
Theoretical pI: Translated: 5.12; Mature: 5.12
Prosite motif: PS00893 NUDIX
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARRDLLVAAGVLRDKFGRVLLVGNDWQGLGRVRHTLPGGVVEPGETLLEALYREIAEET CCCCHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH GLKLTGIKQMAYTVHIEDERRGERAIAVAFEATWEGLLNPSDPDGFIVEARFCPPDEAVE CCEEEEEEEEEEEEEECCCCCCCEEEEEEEECCHHCCCCCCCCCCEEEEEECCCHHHHHH LLESPPMREPLHDYLRTGEPGRFYAFKGWDGRGGLRVPPLRAESSR HHHCCCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure ARRDLLVAAGVLRDKFGRVLLVGNDWQGLGRVRHTLPGGVVEPGETLLEALYREIAEET CCCHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH GLKLTGIKQMAYTVHIEDERRGERAIAVAFEATWEGLLNPSDPDGFIVEARFCPPDEAVE CCEEEEEEEEEEEEEECCCCCCCEEEEEEEECCHHCCCCCCCCCCEEEEEECCCHHHHHH LLESPPMREPLHDYLRTGEPGRFYAFKGWDGRGGLRVPPLRAESSR HHHCCCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA