| Definition | Deinococcus geothermalis DSM 11300, complete genome. |
|---|---|
| Accession | NC_008025 |
| Length | 2,467,205 |
Click here to switch to the map view.
The map label for this gene is hisD [H]
Identifier: 94984691
GI number: 94984691
Start: 621484
End: 622977
Strand: Reverse
Name: hisD [H]
Synonym: Dgeo_0584
Alternate gene names: 94984691
Gene position: 622977-621484 (Counterclockwise)
Preceding gene: 94984692
Following gene: 94984687
Centisome position: 25.25
GC content: 67.4
Gene sequence:
>1494_bases ATGCCCATGCAAGTCCTTCAAGGTGACGCCGCCCGCGCGGCCCTGACCCGCTCCTTTGGTGAGATTCCTGTTCCAGAAAG CGTTTTGGCCCGCATTGAGGCCACCTTTGGCGAACCCCTCACGCCGGAGGAGGTGGTGGCGCGCATCCTCGCAGACGTGA GGGCACGCGGCGACGAGGCCCTGCTCGACTGGACCGAAAAGCTGGACGGCGCCCGTCCCGAGGCGCTTGAAGTGACGCGG GAAGAGATCGAGGCGGCGCAGGTTGACCCCGCGTTGCATGACGCAATCCGCCTCGCCGCTGCGCGCGTCCGGGCCTTTTA CGAGCAGCAGCCCGCCCACGGCTTTCTGGATCATGGTCCGGATGGAGCACTGGGCCAACTGGTGCGCCCGCTCTCGCGGG TCGGCGTGTATGTGCCCGGCGGCCTGGCACCCCTCATCAGCACGCTGATTCACACGGTGGTTCCGGCACAGGTGGCAGGC GTGCCAGAAATCATCGTGACGACGCCACCAGGACGGGACAGCCGGGTGAATCCGGCCATCCTGGTGGCGGCGCGGGAGGT TGGGGTGAACCGCATCTTCCGAGTAGGCGGCGCCCAGGCCATTGGCGCCTTCGCCTACGGCACCGCCAGCGTCCCTGCTG TGGATAAAATTGCCGGGCCGGGCAACCTCTTTGTGGTGATTGCCAAGCGAATGGTCTACGGCGCGGCGGGTATCGAGAGC CTGCCCGGCCCGACCGAGACACTGGTGGTGGCAGACGACTCTGCCGACCCGCGCTTTGTGGCGGCGGACCTGCTGGCCCA GGCCGAACACCTGGGGGCCGAACCTGTGTTGGTGTCCACCAGCCGCGACCTGCTGGTGGAGGTGCAAAACAAGCTGAACG GACAACTGGAAGCGCTGCCCGAACCCAACCGGAGTTGGGCGCGTGACAGCGTGCTCAGCCGCATGAAGGTGGTGCTGGCC GCCGACCTCGCGGAGGCCCTCGACCTCGCCAACCTCTACGCCCCCGAACACCTTTGCCTGCTGACCCGCGACCCCTGGAG CCTGCTGGGGCAGGTGCGCCGAGCAGGCGGCGTCTTTGTGGGCGAGGCGAGCATGGAGGCTCTGGGCGACTATGTGGCCG GCCCCAGCCACGTCATGCCCACCGGCGGCACCGCCCGCTTTATGAGTCCGGTCAATGTTCGCGACTTTCAGAACATCATC AGTGTGGTCGGCGTGAACGAGGCAGCGCTGCGCCGCATCGGCCCTCCCGCCGCCCGCCTCGCCCGCGCCGAGGGCCTAGA AGCTCACGCCCGCGCGATCGAAAGCCGCCTGACCCCAGAGGTGCCCGAGGCGCACCCGGAGGCAACACTGAAGGTGCTGG AGGAGGCCGCACTGGATAAGGACGGAGGACAAGGCTTAGAGCAGGTCGAGCGGGTGCGGACAACTCCCCCGGTGGATCAG CCCCTCTCTACCCAAACCCCGCCTTCCAAGACCCGAAGGCGTAACGACTCCTAA
Upstream 100 bases:
>100_bases GTAAACTTCAAACGGCTCCACCCAGTCCGCGCCGCCGCCCTCGCCCTTTCGTCTGGTGTTCAGCACTCACAGCTCAGCGC CACAGCGCCTTCCTCCGGAG
Downstream 100 bases:
>100_bases TCTCTTCTTTTTACCCCTTCGCCGCCGGAGGCTGCGTTCCTCCATCTGCCAGTTGAATCAACCACGCCATCAGCTGCACC AACGCGAGTGCCATCGCGGG
Product: histidinol dehydrogenase
Products: NA
Alternate protein names: HDH [H]
Number of amino acids: Translated: 497; Mature: 496
Protein sequence:
>497_residues MPMQVLQGDAARAALTRSFGEIPVPESVLARIEATFGEPLTPEEVVARILADVRARGDEALLDWTEKLDGARPEALEVTR EEIEAAQVDPALHDAIRLAAARVRAFYEQQPAHGFLDHGPDGALGQLVRPLSRVGVYVPGGLAPLISTLIHTVVPAQVAG VPEIIVTTPPGRDSRVNPAILVAAREVGVNRIFRVGGAQAIGAFAYGTASVPAVDKIAGPGNLFVVIAKRMVYGAAGIES LPGPTETLVVADDSADPRFVAADLLAQAEHLGAEPVLVSTSRDLLVEVQNKLNGQLEALPEPNRSWARDSVLSRMKVVLA ADLAEALDLANLYAPEHLCLLTRDPWSLLGQVRRAGGVFVGEASMEALGDYVAGPSHVMPTGGTARFMSPVNVRDFQNII SVVGVNEAALRRIGPPAARLARAEGLEAHARAIESRLTPEVPEAHPEATLKVLEEAALDKDGGQGLEQVERVRTTPPVDQ PLSTQTPPSKTRRRNDS
Sequences:
>Translated_497_residues MPMQVLQGDAARAALTRSFGEIPVPESVLARIEATFGEPLTPEEVVARILADVRARGDEALLDWTEKLDGARPEALEVTR EEIEAAQVDPALHDAIRLAAARVRAFYEQQPAHGFLDHGPDGALGQLVRPLSRVGVYVPGGLAPLISTLIHTVVPAQVAG VPEIIVTTPPGRDSRVNPAILVAAREVGVNRIFRVGGAQAIGAFAYGTASVPAVDKIAGPGNLFVVIAKRMVYGAAGIES LPGPTETLVVADDSADPRFVAADLLAQAEHLGAEPVLVSTSRDLLVEVQNKLNGQLEALPEPNRSWARDSVLSRMKVVLA ADLAEALDLANLYAPEHLCLLTRDPWSLLGQVRRAGGVFVGEASMEALGDYVAGPSHVMPTGGTARFMSPVNVRDFQNII SVVGVNEAALRRIGPPAARLARAEGLEAHARAIESRLTPEVPEAHPEATLKVLEEAALDKDGGQGLEQVERVRTTPPVDQ PLSTQTPPSKTRRRNDS >Mature_496_residues PMQVLQGDAARAALTRSFGEIPVPESVLARIEATFGEPLTPEEVVARILADVRARGDEALLDWTEKLDGARPEALEVTRE EIEAAQVDPALHDAIRLAAARVRAFYEQQPAHGFLDHGPDGALGQLVRPLSRVGVYVPGGLAPLISTLIHTVVPAQVAGV PEIIVTTPPGRDSRVNPAILVAAREVGVNRIFRVGGAQAIGAFAYGTASVPAVDKIAGPGNLFVVIAKRMVYGAAGIESL PGPTETLVVADDSADPRFVAADLLAQAEHLGAEPVLVSTSRDLLVEVQNKLNGQLEALPEPNRSWARDSVLSRMKVVLAA DLAEALDLANLYAPEHLCLLTRDPWSLLGQVRRAGGVFVGEASMEALGDYVAGPSHVMPTGGTARFMSPVNVRDFQNIIS VVGVNEAALRRIGPPAARLARAEGLEAHARAIESRLTPEVPEAHPEATLKVLEEAALDKDGGQGLEQVERVRTTPPVDQP LSTQTPPSKTRRRNDS
Specific function: Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine [H]
COG id: COG0141
COG function: function code E; Histidinol dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the histidinol dehydrogenase family [H]
Homologues:
Organism=Escherichia coli, GI1788331, Length=403, Percent_Identity=38.4615384615385, Blast_Score=255, Evalue=5e-69, Organism=Saccharomyces cerevisiae, GI6319819, Length=411, Percent_Identity=37.2262773722628, Blast_Score=244, Evalue=3e-65,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016161 - InterPro: IPR022695 - InterPro: IPR001692 - InterPro: IPR012131 [H]
Pfam domain/function: PF00815 Histidinol_dh [H]
EC number: =1.1.1.23 [H]
Molecular weight: Translated: 52779; Mature: 52648
Theoretical pI: Translated: 4.93; Mature: 4.93
Prosite motif: PS00611 HISOL_DEHYDROGENASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPMQVLQGDAARAALTRSFGEIPVPESVLARIEATFGEPLTPEEVVARILADVRARGDEA CCCHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHH LLDWTEKLDGARPEALEVTREEIEAAQVDPALHDAIRLAAARVRAFYEQQPAHGFLDHGP HHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC DGALGQLVRPLSRVGVYVPGGLAPLISTLIHTVVPAQVAGVPEIIVTTPPGRDSRVNPAI CCHHHHHHHHHHHCCEECCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCEE LVAAREVGVNRIFRVGGAQAIGAFAYGTASVPAVDKIAGPGNLFVVIAKRMVYGAAGIES EEEHHHHCHHHHHHHCCCHHHHHHHCCCCCCCCHHHCCCCCCEEHHHHHHHHHHHCCCCC LPGPTETLVVADDSADPRFVAADLLAQAEHLGAEPVLVSTSRDLLVEVQNKLNGQLEALP CCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHCCCCEECCC EPNRSWARDSVLSRMKVVLAADLAEALDLANLYAPEHLCLLTRDPWSLLGQVRRAGGVFV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHCCEEE GEASMEALGDYVAGPSHVMPTGGTARFMSPVNVRDFQNIISVVGVNEAALRRIGPPAARL ECHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHCCCHHHHHHCCCHHHHH ARAEGLEAHARAIESRLTPEVPEAHPEATLKVLEEAALDKDGGQGLEQVERVRTTPPVDQ HHHCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCC PLSTQTPPSKTRRRNDS CCCCCCCCHHHHCCCCC >Mature Secondary Structure PMQVLQGDAARAALTRSFGEIPVPESVLARIEATFGEPLTPEEVVARILADVRARGDEA CCHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHH LLDWTEKLDGARPEALEVTREEIEAAQVDPALHDAIRLAAARVRAFYEQQPAHGFLDHGP HHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC DGALGQLVRPLSRVGVYVPGGLAPLISTLIHTVVPAQVAGVPEIIVTTPPGRDSRVNPAI CCHHHHHHHHHHHCCEECCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCEE LVAAREVGVNRIFRVGGAQAIGAFAYGTASVPAVDKIAGPGNLFVVIAKRMVYGAAGIES EEEHHHHCHHHHHHHCCCHHHHHHHCCCCCCCCHHHCCCCCCEEHHHHHHHHHHHCCCCC LPGPTETLVVADDSADPRFVAADLLAQAEHLGAEPVLVSTSRDLLVEVQNKLNGQLEALP CCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHCCCCEECCC EPNRSWARDSVLSRMKVVLAADLAEALDLANLYAPEHLCLLTRDPWSLLGQVRRAGGVFV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHCCEEE GEASMEALGDYVAGPSHVMPTGGTARFMSPVNVRDFQNIISVVGVNEAALRRIGPPAARL ECHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHCCCHHHHHHCCCHHHHH ARAEGLEAHARAIESRLTPEVPEAHPEATLKVLEEAALDKDGGQGLEQVERVRTTPPVDQ HHHCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCC PLSTQTPPSKTRRRNDS CCCCCCCCHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10567266 [H]