| Definition | Deinococcus geothermalis DSM 11300, complete genome. |
|---|---|
| Accession | NC_008025 |
| Length | 2,467,205 |
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The map label for this gene is 94984667
Identifier: 94984667
GI number: 94984667
Start: 598320
End: 598997
Strand: Reverse
Name: 94984667
Synonym: Dgeo_0560
Alternate gene names: NA
Gene position: 598997-598320 (Counterclockwise)
Preceding gene: 94984670
Following gene: 94984665
Centisome position: 24.28
GC content: 72.71
Gene sequence:
>678_bases GTGCCGGACTTCACGGTCGTGATCCCCGCGCGCAACGAGGCGGCGTACCTGCCCCTGACGTTGCGCGCCCTCGAACGCCA GACGCAGCCCCCCGCCGAAGTGATCGTGGTGGATAACGCCAGCCGCGACGACACGGCGCAGCTCGCGCGGGCGTGGGGCG CCCAGGTCATCTCCTGCGCGGTGCGCGGCATCGCCCACGCGCGGCAGGCGGGGTTGGACGCCGCCCGGACGCCCTGGGTC GCCTCGACCGACGCCGACTCGCTGCCCACCCCCGAGTGGCTCGCCCGGCTGTCTGAGGCAGCAGACGCCGCACCCGGCCG GGTGGCGCTCTACGGCCCGATGCGCTTTTGCGGTGTGTCGCAGCCCGTGAGCGCCCTTTCCGAACTGGGATACGGCGCCT TTCTGCGGGTCTGCGAGCTGACGGGCCGTCCCAACCTGGCCGGGGCGAACATGGCCTTCTCGCGGGCAGCGGCGGGGCTC GTGGGCGGCTACCCCCATGTGGAGGCCTACGAGGACGTGCTGCTTGGACGGGCGCTGGCGGGGCTGGGCGAGGTGGCCTA TGTGCCCGGCGCCCTGGTGGAGACCAGCGCCCGGCGACTGGAGGGGGGCTGGCTGCCTTTTTTGTGGCGGCACGCGCTCA ACCTCAGCGGTCATAGGCGAGGGTATTTCGCGGACTAG
Upstream 100 bases:
>100_bases GGCCCGAGCGTGCCGGGCCGCAGGGGCAAGGGAGGGAGCCGGCGGGTCATCGCGCCTGCTTCCAGATGCGCCGCACGCAG GAGACTGCTACCCTGGCGCG
Downstream 100 bases:
>100_bases CGGCTTCGGGAAAGGGGATCTCGCGCGGCACCCCCAAGACGCTCGCGTACACGTCCAGCACCCGCTCGGCCACACCACCC GGCGTCCAGGCAGCGCCAAA
Product: glycosyl transferase family protein
Products: NA
Alternate protein names: Glycosyltransferase; Glycosyl Transferase; Membrane Sugar Transferase; Glycosyl Transferase Family 2 Protein; Glycosyltransferase Protein; Cell Wall Biosynthesis Glycosyltransferase-Like Protein; Glycosyltransferase-Like Protein; Glycosyl Transferase-Related Protein; AMP-Dependent Synthetase And Ligase; Family 2 Glycosyl Transferase; Glycosyl Transferase Group 2 Family Protein
Number of amino acids: Translated: 225; Mature: 224
Protein sequence:
>225_residues MPDFTVVIPARNEAAYLPLTLRALERQTQPPAEVIVVDNASRDDTAQLARAWGAQVISCAVRGIAHARQAGLDAARTPWV ASTDADSLPTPEWLARLSEAADAAPGRVALYGPMRFCGVSQPVSALSELGYGAFLRVCELTGRPNLAGANMAFSRAAAGL VGGYPHVEAYEDVLLGRALAGLGEVAYVPGALVETSARRLEGGWLPFLWRHALNLSGHRRGYFAD
Sequences:
>Translated_225_residues MPDFTVVIPARNEAAYLPLTLRALERQTQPPAEVIVVDNASRDDTAQLARAWGAQVISCAVRGIAHARQAGLDAARTPWV ASTDADSLPTPEWLARLSEAADAAPGRVALYGPMRFCGVSQPVSALSELGYGAFLRVCELTGRPNLAGANMAFSRAAAGL VGGYPHVEAYEDVLLGRALAGLGEVAYVPGALVETSARRLEGGWLPFLWRHALNLSGHRRGYFAD >Mature_224_residues PDFTVVIPARNEAAYLPLTLRALERQTQPPAEVIVVDNASRDDTAQLARAWGAQVISCAVRGIAHARQAGLDAARTPWVA STDADSLPTPEWLARLSEAADAAPGRVALYGPMRFCGVSQPVSALSELGYGAFLRVCELTGRPNLAGANMAFSRAAAGLV GGYPHVEAYEDVLLGRALAGLGEVAYVPGALVETSARRLEGGWLPFLWRHALNLSGHRRGYFAD
Specific function: Unknown
COG id: COG0463
COG function: function code M; Glycosyltransferases involved in cell wall biogenesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23934; Mature: 23803
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDFTVVIPARNEAAYLPLTLRALERQTQPPAEVIVVDNASRDDTAQLARAWGAQVISCA CCCCEEEEECCCCCEECHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHH VRGIAHARQAGLDAARTPWVASTDADSLPTPEWLARLSEAADAAPGRVALYGPMRFCGVS HHHHHHHHHHCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCHHHHCCC QPVSALSELGYGAFLRVCELTGRPNLAGANMAFSRAAAGLVGGYPHVEAYEDVLLGRALA HHHHHHHHCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH GLGEVAYVPGALVETSARRLEGGWLPFLWRHALNLSGHRRGYFAD HCCCHHHCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure PDFTVVIPARNEAAYLPLTLRALERQTQPPAEVIVVDNASRDDTAQLARAWGAQVISCA CCCEEEEECCCCCEECHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHH VRGIAHARQAGLDAARTPWVASTDADSLPTPEWLARLSEAADAAPGRVALYGPMRFCGVS HHHHHHHHHHCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCHHHHCCC QPVSALSELGYGAFLRVCELTGRPNLAGANMAFSRAAAGLVGGYPHVEAYEDVLLGRALA HHHHHHHHCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH GLGEVAYVPGALVETSARRLEGGWLPFLWRHALNLSGHRRGYFAD HCCCHHHCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA