| Definition | Deinococcus geothermalis DSM 11300, complete genome. |
|---|---|
| Accession | NC_008025 |
| Length | 2,467,205 |
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The map label for this gene is hslO [H]
Identifier: 94984660
GI number: 94984660
Start: 588189
End: 589100
Strand: Reverse
Name: hslO [H]
Synonym: Dgeo_0553
Alternate gene names: 94984660
Gene position: 589100-588189 (Counterclockwise)
Preceding gene: 94984665
Following gene: 94984659
Centisome position: 23.88
GC content: 69.08
Gene sequence:
>912_bases ATGACATTAGACCCCCTCCCTGCCTCCTTTCTGCTGCGCGGCACTGCCGCAGACAACACCCTGCGCCTCGTGGGGATCGA CGCGACCCGGATCGTCGAGGAAGCCCGCCTCCGGCACCACCTCAGCAAAACAGCGACCGCCGCGCTGGGCCGCGCGCTGG CGGCCAGTGCCCTCCTTGCCGTCGTCCTGGGCAAAAAGAGTGACAGCCGTGTGACCGTGCGGATCCAGGGGGACGGCCCG GTGGGCTGGATCGTCAGCGAGGGCAGCGTCGACGGACAGGTGCGCGGCTACGTGCGCGATCCCGGCGCCGACCTGCCGGT GCGGGGCACGGACGGCAAGCTGGACGTGCGCGGTCTCGTTGGCACGGAGGGCGAGCTGGCCGTCACCCGGCTGCTCGACA ATGGCGAACCTTACACCGGCAGCGTGCGCCTGGTCAGCGGGGAGATCGCAGAGGATATCAGCACCTATCTGGGGGTATCC GAACAGATTCCCAACGCGGTGCTGCTGGGCGTGTACGAGGAAGGCGGGCGGGTCTACCGCGCCGGCGGGCTGCTGGTCCA GGCCATGCCCGGCGCGACCGACGAGACTCTGGCGCGGTTGGAGGCCAACATCCGCGGGATGGGCCAGCTGACCGATCACC TGCGGCGGGGCAGCCTGCTGGAAACGATGCAGACGGCCGCCGCCGGGCTCGACCTGGTGCTCGCCCCCGAGGCACAGCCG GTCCACTTCCAGTGCCGCTGCTCGCGTGAACGGGCGATGGAAAGCCTGCGCTTTTTTGCCCCCACCGAGCGTCAGGAGAT GATGGACGAGGGCGGCCAGGAGATTGTCTGCCACTGGTGCGGCGAGCATTACCACATCACGCCCGACGAGATCGCCGATC TGGACGCGCAGCACACGCACGCGCAGGCGTAA
Upstream 100 bases:
>100_bases CGCAGGATGGAGCACACCCGCAGCAAAGAACAGAAAAGAACTCGTGGGGATTGAGAGGCCTCCCACAGCGGCCTTGAGTC TCCACTTGTAAGATTTCCTA
Downstream 100 bases:
>100_bases CGCCGCTCTGCCCGCGAGGCGGTCTGCGCAAGAGAGCCAGATCGTCTCTTTGCGCTGCAGGTGGTCGCCAACGCTCAGTG AGTGTGGACCGGCGCCCTCA
Product: Hsp33 protein
Products: NA
Alternate protein names: Heat shock protein 33 homolog; HSP33 [H]
Number of amino acids: Translated: 303; Mature: 302
Protein sequence:
>303_residues MTLDPLPASFLLRGTAADNTLRLVGIDATRIVEEARLRHHLSKTATAALGRALAASALLAVVLGKKSDSRVTVRIQGDGP VGWIVSEGSVDGQVRGYVRDPGADLPVRGTDGKLDVRGLVGTEGELAVTRLLDNGEPYTGSVRLVSGEIAEDISTYLGVS EQIPNAVLLGVYEEGGRVYRAGGLLVQAMPGATDETLARLEANIRGMGQLTDHLRRGSLLETMQTAAAGLDLVLAPEAQP VHFQCRCSRERAMESLRFFAPTERQEMMDEGGQEIVCHWCGEHYHITPDEIADLDAQHTHAQA
Sequences:
>Translated_303_residues MTLDPLPASFLLRGTAADNTLRLVGIDATRIVEEARLRHHLSKTATAALGRALAASALLAVVLGKKSDSRVTVRIQGDGP VGWIVSEGSVDGQVRGYVRDPGADLPVRGTDGKLDVRGLVGTEGELAVTRLLDNGEPYTGSVRLVSGEIAEDISTYLGVS EQIPNAVLLGVYEEGGRVYRAGGLLVQAMPGATDETLARLEANIRGMGQLTDHLRRGSLLETMQTAAAGLDLVLAPEAQP VHFQCRCSRERAMESLRFFAPTERQEMMDEGGQEIVCHWCGEHYHITPDEIADLDAQHTHAQA >Mature_302_residues TLDPLPASFLLRGTAADNTLRLVGIDATRIVEEARLRHHLSKTATAALGRALAASALLAVVLGKKSDSRVTVRIQGDGPV GWIVSEGSVDGQVRGYVRDPGADLPVRGTDGKLDVRGLVGTEGELAVTRLLDNGEPYTGSVRLVSGEIAEDISTYLGVSE QIPNAVLLGVYEEGGRVYRAGGLLVQAMPGATDETLARLEANIRGMGQLTDHLRRGSLLETMQTAAAGLDLVLAPEAQPV HFQCRCSRERAMESLRFFAPTERQEMMDEGGQEIVCHWCGEHYHITPDEIADLDAQHTHAQA
Specific function: Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress [H]
COG id: COG1281
COG function: function code O; Disulfide bond chaperones of the HSP33 family
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HSP33 family [H]
Homologues:
Organism=Escherichia coli, GI87082260, Length=291, Percent_Identity=28.5223367697594, Blast_Score=98, Evalue=7e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000397 - InterPro: IPR016154 - InterPro: IPR016153 [H]
Pfam domain/function: PF01430 HSP33 [H]
EC number: NA
Molecular weight: Translated: 32523; Mature: 32392
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLDPLPASFLLRGTAADNTLRLVGIDATRIVEEARLRHHLSKTATAALGRALAASALLA CCCCCCCHHHEEECCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VVLGKKSDSRVTVRIQGDGPVGWIVSEGSVDGQVRGYVRDPGADLPVRGTDGKLDVRGLV HHHCCCCCCEEEEEEECCCCEEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCEEEEEEE GTEGELAVTRLLDNGEPYTGSVRLVSGEIAEDISTYLGVSEQIPNAVLLGVYEEGGRVYR CCCCCEEEEEECCCCCCCCCEEEEEECHHHHHHHHHCCCHHHCCCEEEEEEEECCCEEEE AGGLLVQAMPGATDETLARLEANIRGMGQLTDHLRRGSLLETMQTAAAGLDLVLAPEAQP ECCEEEEECCCCCHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHCCCEEEECCCCCC VHFQCRCSRERAMESLRFFAPTERQEMMDEGGQEIVCHWCGEHYHITPDEIADLDAQHTH EEEEEECCHHHHHHHHHHCCCCHHHHHHHCCCCEEEEEECCCCEEECHHHHHCCCCCCCC AQA CCC >Mature Secondary Structure TLDPLPASFLLRGTAADNTLRLVGIDATRIVEEARLRHHLSKTATAALGRALAASALLA CCCCCCHHHEEECCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VVLGKKSDSRVTVRIQGDGPVGWIVSEGSVDGQVRGYVRDPGADLPVRGTDGKLDVRGLV HHHCCCCCCEEEEEEECCCCEEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCEEEEEEE GTEGELAVTRLLDNGEPYTGSVRLVSGEIAEDISTYLGVSEQIPNAVLLGVYEEGGRVYR CCCCCEEEEEECCCCCCCCCEEEEEECHHHHHHHHHCCCHHHCCCEEEEEEEECCCEEEE AGGLLVQAMPGATDETLARLEANIRGMGQLTDHLRRGSLLETMQTAAAGLDLVLAPEAQP ECCEEEEECCCCCHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHCCCEEEECCCCCC VHFQCRCSRERAMESLRFFAPTERQEMMDEGGQEIVCHWCGEHYHITPDEIADLDAQHTH EEEEEECCHHHHHHHHHHCCCCHHHHHHHCCCCEEEEEECCCCEEECHHHHHCCCCCCCC AQA CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10567266 [H]