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The map label for this gene is sufB [C]

Identifier: 94984579

GI number: 94984579

Start: 485591

End: 486943

Strand: Reverse

Name: sufB [C]

Synonym: Dgeo_0472

Alternate gene names: 94984579

Gene position: 486943-485591 (Counterclockwise)

Preceding gene: 94984580

Following gene: 94984578

Centisome position: 19.74

GC content: 65.26

Gene sequence:

>1353_bases
ATGACCCAATTCACCGACCAACTCGCTCAGTACAGCGGCCCAGAATGGCTGACCGCCAAGCGCCGCGCAAGCCTCGACCT
TTTTCACCAGCTCGATGTCCCCTCCGAGAGCGTGGAGGCCTGGAAATACACCCGCGTGGATGTGGACTTCAGCGAGTTGC
GCCCCCATCCCAAGCGCGAGCGTGTGACCGATCTCTCCGCGTTGCCGAGCAGCGTACAAAAGCGCCTCACCAGTACGGAC
GTCGGCGCCTACCTTGTGCTGGACGGCCCGGATGTGGTGTACGCCACCGAACTGCCCGCTGAGCTGCGCGAGAAGGGCGT
GATCTTTACCGACCTGAAGACGGCAGTGGAGCAGCACGCCGAACTGGTGCAGCAGTACCTCTACTCGGTGGTCCCGGCGG
AAGTGCCCGACGACACGACCATCGCCGCGCCCGGCACCACGCCCAGCAAGTCGCCTGACCCCAGTGAAGGCAAGTTCAGT
GCGCTGGCGGCCGCCCTGTGGACCAACGGCGCCTTTGTGTATGTGCCGCGTGGCGTGGAAGTCGAACTGCCGCTGGGTTC
CTTCCGCGTGATGAGCGAGGCGGGCACCTATACCGCGACCCGCACGCTGGTCGTGGCGGAGGAGAACGCGCAGGTCACCT
TCATCGACGAGCAGGATTCGGAAGACCTGCCCGGCACCTACGCCATCGGCGCGGTCGAACTGGTGGTCAAGCAGGGCGCC
CGGCTGCGCTACGTCTCCATCCAGAACTGGGGCAAGGGCGTCACGCACATCCAGCGCCAGCGCGGCGACGTGCACCGGGA
CGCGACGCTGAACAGCCTGGTCGTGACGATGGGCGGCACGCTCAGCCGCACCGAGATGCAGTCCTACCTGCGCGGCCAGG
GCAGCGACTCCGAGATGCTGGGGCTGTACTTCGCCAGCAAGGACCAGCACTTCGACCACTACACCCTTCAGCACCACGCT
GCCCCGCACGCGCACTCCGACCTGCTGTACAAGGGCGTGAACGCCGATCAGTCGGTGGGCGTCTTTTCCGGCATGATCAA
GGTGGACCTCGGTGCCCAAAAGACCGACGCCTACCAGAAGCACCGCACGCTGATGCTCTCCAGTGAGGCGCAGAACTACT
CCGTGCCTCAGCTGGAGATCAACGCGAATGACGTGCGCTGCTCGCACGGCTCGACCACCGGCCCGGTCAACCAGGAGGCC
CTCTTCTTCCTGCGCTCGCGCGGCATCCACAAGGAACTCGCCGAGAAGATGCTGGTCACGGCCTTCCTGGAGGACGTGCT
TGCGCGCGTGCCGCTTCAGAGCGTCGTGAAGTACATCGAGGGCATCATCGCGGAGAAGGTGGGGGCGGCGTAA

Upstream 100 bases:

>100_bases
AACCGCCTGATCGAACTCGAAATGGAAGGCAGCGTCGGCTAAAGGCCATGCGCAGCGCGGACGCCGCACACTGGGGCGTC
CGCGTCCCTCTGGAGGAACC

Downstream 100 bases:

>100_bases
GGGAAGCGTTCCGCTTTCAGCCGTGAGCGGTCAGTCCTGGGAGGGGCTGGCCGCTTCTTCGTGGAGAGGCTTGATGGTAA
AACCCGGCATGAACAAGTCG

Product: FeS assembly protein SufD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 450; Mature: 449

Protein sequence:

>450_residues
MTQFTDQLAQYSGPEWLTAKRRASLDLFHQLDVPSESVEAWKYTRVDVDFSELRPHPKRERVTDLSALPSSVQKRLTSTD
VGAYLVLDGPDVVYATELPAELREKGVIFTDLKTAVEQHAELVQQYLYSVVPAEVPDDTTIAAPGTTPSKSPDPSEGKFS
ALAAALWTNGAFVYVPRGVEVELPLGSFRVMSEAGTYTATRTLVVAEENAQVTFIDEQDSEDLPGTYAIGAVELVVKQGA
RLRYVSIQNWGKGVTHIQRQRGDVHRDATLNSLVVTMGGTLSRTEMQSYLRGQGSDSEMLGLYFASKDQHFDHYTLQHHA
APHAHSDLLYKGVNADQSVGVFSGMIKVDLGAQKTDAYQKHRTLMLSSEAQNYSVPQLEINANDVRCSHGSTTGPVNQEA
LFFLRSRGIHKELAEKMLVTAFLEDVLARVPLQSVVKYIEGIIAEKVGAA

Sequences:

>Translated_450_residues
MTQFTDQLAQYSGPEWLTAKRRASLDLFHQLDVPSESVEAWKYTRVDVDFSELRPHPKRERVTDLSALPSSVQKRLTSTD
VGAYLVLDGPDVVYATELPAELREKGVIFTDLKTAVEQHAELVQQYLYSVVPAEVPDDTTIAAPGTTPSKSPDPSEGKFS
ALAAALWTNGAFVYVPRGVEVELPLGSFRVMSEAGTYTATRTLVVAEENAQVTFIDEQDSEDLPGTYAIGAVELVVKQGA
RLRYVSIQNWGKGVTHIQRQRGDVHRDATLNSLVVTMGGTLSRTEMQSYLRGQGSDSEMLGLYFASKDQHFDHYTLQHHA
APHAHSDLLYKGVNADQSVGVFSGMIKVDLGAQKTDAYQKHRTLMLSSEAQNYSVPQLEINANDVRCSHGSTTGPVNQEA
LFFLRSRGIHKELAEKMLVTAFLEDVLARVPLQSVVKYIEGIIAEKVGAA
>Mature_449_residues
TQFTDQLAQYSGPEWLTAKRRASLDLFHQLDVPSESVEAWKYTRVDVDFSELRPHPKRERVTDLSALPSSVQKRLTSTDV
GAYLVLDGPDVVYATELPAELREKGVIFTDLKTAVEQHAELVQQYLYSVVPAEVPDDTTIAAPGTTPSKSPDPSEGKFSA
LAAALWTNGAFVYVPRGVEVELPLGSFRVMSEAGTYTATRTLVVAEENAQVTFIDEQDSEDLPGTYAIGAVELVVKQGAR
LRYVSIQNWGKGVTHIQRQRGDVHRDATLNSLVVTMGGTLSRTEMQSYLRGQGSDSEMLGLYFASKDQHFDHYTLQHHAA
PHAHSDLLYKGVNADQSVGVFSGMIKVDLGAQKTDAYQKHRTLMLSSEAQNYSVPQLEINANDVRCSHGSTTGPVNQEAL
FFLRSRGIHKELAEKMLVTAFLEDVLARVPLQSVVKYIEGIIAEKVGAA

Specific function: Unknown

COG id: COG0719

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, permease component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0051 (ycf24) family [H]

Homologues:

Organism=Escherichia coli, GI87081955, Length=359, Percent_Identity=26.4623955431755, Blast_Score=142, Evalue=3e-35,
Organism=Escherichia coli, GI1787971, Length=156, Percent_Identity=35.8974358974359, Blast_Score=100, Evalue=2e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010231
- InterPro:   IPR000825 [H]

Pfam domain/function: PF01458 UPF0051 [H]

EC number: NA

Molecular weight: Translated: 49542; Mature: 49411

Theoretical pI: Translated: 5.43; Mature: 5.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQFTDQLAQYSGPEWLTAKRRASLDLFHQLDVPSESVEAWKYTRVDVDFSELRPHPKRE
CCCHHHHHHHCCCCCHHHHHHHCCHHHHHHCCCCCHHHHHEEEEEECCCHHHCCCCCCHH
RVTDLSALPSSVQKRLTSTDVGAYLVLDGPDVVYATELPAELREKGVIFTDLKTAVEQHA
HHHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEEECCCHHHHHCCCEEEHHHHHHHHHH
ELVQQYLYSVVPAEVPDDTTIAAPGTTPSKSPDPSEGKFSALAAALWTNGAFVYVPRGVE
HHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCEE
VELPLGSFRVMSEAGTYTATRTLVVAEENAQVTFIDEQDSEDLPGTYAIGAVELVVKQGA
EEECCCCEEEHHCCCCEEEEEEEEEEECCCEEEEEECCCCCCCCCEEHHHHHHHHHHCCC
RLRYVSIQNWGKGVTHIQRQRGDVHRDATLNSLVVTMGGTLSRTEMQSYLRGQGSDSEML
EEEEEEECCCCCHHHHHHHHCCCCCCCCHHHEEEEECCCCCCHHHHHHHHCCCCCCCCEE
GLYFASKDQHFDHYTLQHHAAPHAHSDLLYKGVNADQSVGVFSGMIKVDLGAQKTDAYQK
EEEEECCCCCCCCEEHHHCCCCCCCCHHHEECCCCCCCCHHHHCEEEEECCCCHHHHHHH
HRTLMLSSEAQNYSVPQLEINANDVRCSHGSTTGPVNQEALFFLRSRGIHKELAEKMLVT
HHEEEEECCCCCCCCCEEEECCCEEEECCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHH
AFLEDVLARVPLQSVVKYIEGIIAEKVGAA
HHHHHHHHHCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TQFTDQLAQYSGPEWLTAKRRASLDLFHQLDVPSESVEAWKYTRVDVDFSELRPHPKRE
CCHHHHHHHCCCCCHHHHHHHCCHHHHHHCCCCCHHHHHEEEEEECCCHHHCCCCCCHH
RVTDLSALPSSVQKRLTSTDVGAYLVLDGPDVVYATELPAELREKGVIFTDLKTAVEQHA
HHHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEEECCCHHHHHCCCEEEHHHHHHHHHH
ELVQQYLYSVVPAEVPDDTTIAAPGTTPSKSPDPSEGKFSALAAALWTNGAFVYVPRGVE
HHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCEE
VELPLGSFRVMSEAGTYTATRTLVVAEENAQVTFIDEQDSEDLPGTYAIGAVELVVKQGA
EEECCCCEEEHHCCCCEEEEEEEEEEECCCEEEEEECCCCCCCCCEEHHHHHHHHHHCCC
RLRYVSIQNWGKGVTHIQRQRGDVHRDATLNSLVVTMGGTLSRTEMQSYLRGQGSDSEML
EEEEEEECCCCCHHHHHHHHCCCCCCCCHHHEEEEECCCCCCHHHHHHHHCCCCCCCCEE
GLYFASKDQHFDHYTLQHHAAPHAHSDLLYKGVNADQSVGVFSGMIKVDLGAQKTDAYQK
EEEEECCCCCCCCEEHHHCCCCCCCCHHHEECCCCCCCCHHHHCEEEEECCCCHHHHHHH
HRTLMLSSEAQNYSVPQLEINANDVRCSHGSTTGPVNQEALFFLRSRGIHKELAEKMLVT
HHEEEEECCCCCCCCCEEEECCCEEEECCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHH
AFLEDVLARVPLQSVVKYIEGIIAEKVGAA
HHHHHHHHHCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA