| Definition | Deinococcus geothermalis DSM 11300, complete genome. |
|---|---|
| Accession | NC_008025 |
| Length | 2,467,205 |
Click here to switch to the map view.
The map label for this gene is pcp [H]
Identifier: 94984549
GI number: 94984549
Start: 455263
End: 455898
Strand: Reverse
Name: pcp [H]
Synonym: Dgeo_0441
Alternate gene names: 94984549
Gene position: 455898-455263 (Counterclockwise)
Preceding gene: 94984556
Following gene: 94984539
Centisome position: 18.48
GC content: 69.03
Gene sequence:
>636_bases ATGCCCACCCTGCTCCTGACTGGCTTCGAGCGCTTCCACACCCACCCCAGCAACCCCAGCGCCCAGGCAGCGGAGGCGCT GAACGGGCAGGCGGTGGGGCAGGCGCACGTCGTATCCGCTCTGCTCCCAGTCGAACCACAGGCGGCAGCCGCAGCTCTGC GCGCCCTGCTGGAGCGGCATCAACCCGATGCTGTGCTGCTCACCGGCCTCGCAGCGGGACGCCCGCAGGTGACGGTGGAG CGGGTCGCTCTGAATGTGATGGACTTCCTGATCCCCGACAACGCCGGGCAGACCTACCGCGACCTCCCCGCCTGCACGGA GCCGAACGCCCCCGCCGCCTACCTCAGCACGCTGCCCCTGCGCGCGGTCGTGAAGGGGTGGCACTCGGCGGGGATTCCCG GCAGCATCAGCAACACTGCAGGCCTGTACGTCTGTAATTTCGTGCTGTATCACGCGCTGCATCAGCTTGCCCGGCTGGGC CGCGCCCAGGTCCCCTGCGGCTTCCTGCATGTGCCCGCCAATGCGGAGCTTGCCCTTGCCGTGTCCGAAGACCAACCCCC ACTCCCCTACCTGCCGCAGGAGGAGATCACGCGGGCGGTACGGGTGGCGGTGGAGATTGTCGGACGCAGGCTGTAG
Upstream 100 bases:
>100_bases GCGCGTGGTTTCGACCTCGGGCAGTTCGGGCACAGAGCGAGCATACCCGCCCGGGCGGCGAAGAACTGCGCGGGGAGGCA GCTTTCTCTATCCTCTCGCC
Downstream 100 bases:
>100_bases CCGCCCACTCCGCTACGGAAAAGGCGCCTTGCCCGCCACCCAACCGCCCTCTGCTCCCCCCGCCCAGTACCACTCGCCCT CCCGCGGTTTCTGTGCGAGG
Product: pyrrolidone-carboxylate peptidase
Products: NA
Alternate protein names: 5-oxoprolyl-peptidase; Pyroglutamyl-peptidase I; PGP-I; Pyrase [H]
Number of amino acids: Translated: 211; Mature: 210
Protein sequence:
>211_residues MPTLLLTGFERFHTHPSNPSAQAAEALNGQAVGQAHVVSALLPVEPQAAAAALRALLERHQPDAVLLTGLAAGRPQVTVE RVALNVMDFLIPDNAGQTYRDLPACTEPNAPAAYLSTLPLRAVVKGWHSAGIPGSISNTAGLYVCNFVLYHALHQLARLG RAQVPCGFLHVPANAELALAVSEDQPPLPYLPQEEITRAVRVAVEIVGRRL
Sequences:
>Translated_211_residues MPTLLLTGFERFHTHPSNPSAQAAEALNGQAVGQAHVVSALLPVEPQAAAAALRALLERHQPDAVLLTGLAAGRPQVTVE RVALNVMDFLIPDNAGQTYRDLPACTEPNAPAAYLSTLPLRAVVKGWHSAGIPGSISNTAGLYVCNFVLYHALHQLARLG RAQVPCGFLHVPANAELALAVSEDQPPLPYLPQEEITRAVRVAVEIVGRRL >Mature_210_residues PTLLLTGFERFHTHPSNPSAQAAEALNGQAVGQAHVVSALLPVEPQAAAAALRALLERHQPDAVLLTGLAAGRPQVTVER VALNVMDFLIPDNAGQTYRDLPACTEPNAPAAYLSTLPLRAVVKGWHSAGIPGSISNTAGLYVCNFVLYHALHQLARLGR AQVPCGFLHVPANAELALAVSEDQPPLPYLPQEEITRAVRVAVEIVGRRL
Specific function: Removes 5-oxoproline from various penultimate amino acid residues except L-proline [H]
COG id: COG2039
COG function: function code O; Pyrrolidone-carboxylate peptidase (N-terminal pyroglutamyl peptidase)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase C15 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000816 - InterPro: IPR016125 [H]
Pfam domain/function: PF01470 Peptidase_C15 [H]
EC number: =3.4.19.3 [H]
Molecular weight: Translated: 22443; Mature: 22312
Theoretical pI: Translated: 6.95; Mature: 6.95
Prosite motif: PS01333 PYRASE_GLU ; PS01334 PYRASE_CYS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTLLLTGFERFHTHPSNPSAQAAEALNGQAVGQAHVVSALLPVEPQAAAAALRALLERH CCCEEEECHHHHCCCCCCCHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHC QPDAVLLTGLAAGRPQVTVERVALNVMDFLIPDNAGQTYRDLPACTEPNAPAAYLSTLPL CCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCHHHHHHHHH RAVVKGWHSAGIPGSISNTAGLYVCNFVLYHALHQLARLGRAQVPCGFLHVPANAELALA HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCEEEEE VSEDQPPLPYLPQEEITRAVRVAVEIVGRRL ECCCCCCCCCCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure PTLLLTGFERFHTHPSNPSAQAAEALNGQAVGQAHVVSALLPVEPQAAAAALRALLERH CCEEEECHHHHCCCCCCCHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHC QPDAVLLTGLAAGRPQVTVERVALNVMDFLIPDNAGQTYRDLPACTEPNAPAAYLSTLPL CCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCHHHHHHHHH RAVVKGWHSAGIPGSISNTAGLYVCNFVLYHALHQLARLGRAQVPCGFLHVPANAELALA HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCEEEEE VSEDQPPLPYLPQEEITRAVRVAVEIVGRRL ECCCCCCCCCCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10567266 [H]