| Definition | Deinococcus geothermalis DSM 11300, complete genome. |
|---|---|
| Accession | NC_008025 |
| Length | 2,467,205 |
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The map label for this gene is yeiI [H]
Identifier: 94984466
GI number: 94984466
Start: 363341
End: 364474
Strand: Reverse
Name: yeiI [H]
Synonym: Dgeo_0358
Alternate gene names: 94984466
Gene position: 364474-363341 (Counterclockwise)
Preceding gene: 94984467
Following gene: 94984465
Centisome position: 14.77
GC content: 71.69
Gene sequence:
>1134_bases ATGCCGCTGACCGAGCGCGAACGCGCCCTCCTCAACCTGATTCGCGAGGCCCCCCTCAGCACCCCCGCAGAACTGGCCCG CCGCCTGGGGACCTCGCGCGCGGCGGTCAATGTGCACGTGAGCAACCTGATTCGCAAGGGTGCACTGCTGGGGCGTGGCT ACGTCGTGGCGCCGGAGCAGGAGGCACGGGTGGTCGTGGTCGGCGGCGCGAACGTGGACATCAAGGCGCGAACGCTCGCG CCCGCTGTCTCTGGCACCAGCAATCCGGGGATGACCCGTCAGGCCGCAGGGGGTGTGGCCCGCAACATCGCGGAGAACTT GGCCCGGCTGGGGATCCAGACGCACCTGATCACGGCGCTTGGGCGGGACGCGCCCGGCGACCTGCTGCTGCGCGAAACGG AGGCGGCGGGTGTGGACATGCGAAGTGTGCTGCGCCTGGACGCCCCCACCGGCACCTACACGGCCGTGCTGGACAATAGC GGCGAGCTGCTGATTGCGGTCGCGGCGATGGAGGTGACGGCTGCCCTGACCCCGGCAGCCCTGAACGAACGTCGCGGCCT GCTCCAGCACGCGAGCTGGGTGGTCGCGGACGGGAACCTCAGCGCAGAAACGCTGACCCATCTGCTCACCCTCTGCCGGG AAGCGGGCGTGCCCGTGACCTTTGAGCCGGTCAGTGTGCCGAAGGCCGCCCACCTCCTCCCCGCACTGCATTCCGGACTC GCGCCGCACACCGTCACGCCGAACGTCGCGGAACTTGCCGCGCTCACGAGCCGGGACGTGGCCGACACGCCCGCGGCGCT CGGAGCAGCTGCGCAGGAGCTGCATGCGCGGGGCGTCCAGACCGTCTGGGTGCGCCGGGGCGACCGCGGCAGCCTGCTGT CAACCCCGGAAGGCGTTACCGAACTCCCCGCTCTCCCCGCCCAGGTCGCCGACGTGACCGGCGCAGGCGACGCGATGCTC GCCGCCTACCTCGCCGCCCTGCTGGAGGGCCATTCTCCCGCCGAGGCCGCCCGTCACGGCCACGCCGCCGCTGCGCTGAC GGTCGAGAGTCCTCATACCGTCTCCCCTACCCTCACCCCCGCTGCCCTTAGAGCGCGGCTGGGAAGCCCTGAGGCCGCGG ACCGTGAGCGCTAA
Upstream 100 bases:
>100_bases GCCGTACTGAAGCTTCCTTAAAACCGGGCAAGGCGTTATCCCCACCAGGAACCACGCCCTCTTGCTTCATTCCGATAAAA ACCTTTACTCTAATTAAGCC
Downstream 100 bases:
>100_bases CCGAAATCCTTGCGTTTCGTCCCCGCTTTCCTTCTGACAGCTCAGGTCTCAAAGCCTTACACCGCACCCCAAAGGAGTCC TCATGCTCACCCCCATTCCC
Product: PfkB
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 377; Mature: 376
Protein sequence:
>377_residues MPLTERERALLNLIREAPLSTPAELARRLGTSRAAVNVHVSNLIRKGALLGRGYVVAPEQEARVVVVGGANVDIKARTLA PAVSGTSNPGMTRQAAGGVARNIAENLARLGIQTHLITALGRDAPGDLLLRETEAAGVDMRSVLRLDAPTGTYTAVLDNS GELLIAVAAMEVTAALTPAALNERRGLLQHASWVVADGNLSAETLTHLLTLCREAGVPVTFEPVSVPKAAHLLPALHSGL APHTVTPNVAELAALTSRDVADTPAALGAAAQELHARGVQTVWVRRGDRGSLLSTPEGVTELPALPAQVADVTGAGDAML AAYLAALLEGHSPAEAARHGHAAAALTVESPHTVSPTLTPAALRARLGSPEAADRER
Sequences:
>Translated_377_residues MPLTERERALLNLIREAPLSTPAELARRLGTSRAAVNVHVSNLIRKGALLGRGYVVAPEQEARVVVVGGANVDIKARTLA PAVSGTSNPGMTRQAAGGVARNIAENLARLGIQTHLITALGRDAPGDLLLRETEAAGVDMRSVLRLDAPTGTYTAVLDNS GELLIAVAAMEVTAALTPAALNERRGLLQHASWVVADGNLSAETLTHLLTLCREAGVPVTFEPVSVPKAAHLLPALHSGL APHTVTPNVAELAALTSRDVADTPAALGAAAQELHARGVQTVWVRRGDRGSLLSTPEGVTELPALPAQVADVTGAGDAML AAYLAALLEGHSPAEAARHGHAAAALTVESPHTVSPTLTPAALRARLGSPEAADRER >Mature_376_residues PLTERERALLNLIREAPLSTPAELARRLGTSRAAVNVHVSNLIRKGALLGRGYVVAPEQEARVVVVGGANVDIKARTLAP AVSGTSNPGMTRQAAGGVARNIAENLARLGIQTHLITALGRDAPGDLLLRETEAAGVDMRSVLRLDAPTGTYTAVLDNSG ELLIAVAAMEVTAALTPAALNERRGLLQHASWVVADGNLSAETLTHLLTLCREAGVPVTFEPVSVPKAAHLLPALHSGLA PHTVTPNVAELAALTSRDVADTPAALGAAAQELHARGVQTVWVRRGDRGSLLSTPEGVTELPALPAQVADVTGAGDAMLA AYLAALLEGHSPAEAARHGHAAAALTVESPHTVSPTLTPAALRARLGSPEAADRER
Specific function: Unknown
COG id: COG0524
COG function: function code G; Sugar kinases, ribokinase family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the carbohydrate kinase pfkB family [H]
Homologues:
Organism=Homo sapiens, GI11545855, Length=237, Percent_Identity=28.2700421940928, Blast_Score=65, Evalue=9e-11, Organism=Escherichia coli, GI1788484, Length=359, Percent_Identity=36.4902506963788, Blast_Score=192, Evalue=2e-50, Organism=Escherichia coli, GI1788491, Length=310, Percent_Identity=32.258064516129, Blast_Score=147, Evalue=1e-36, Organism=Escherichia coli, GI87081971, Length=297, Percent_Identity=26.9360269360269, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI87082281, Length=290, Percent_Identity=27.5862068965517, Blast_Score=64, Evalue=1e-11, Organism=Escherichia coli, GI1789432, Length=283, Percent_Identity=27.9151943462898, Blast_Score=62, Evalue=6e-11, Organism=Caenorhabditis elegans, GI25147470, Length=322, Percent_Identity=25.4658385093168, Blast_Score=87, Evalue=2e-17, Organism=Drosophila melanogaster, GI24580669, Length=323, Percent_Identity=26.0061919504644, Blast_Score=92, Evalue=8e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011611 - InterPro: IPR002173 - InterPro: IPR011991 [H]
Pfam domain/function: PF00294 PfkB [H]
EC number: NA
Molecular weight: Translated: 38915; Mature: 38784
Theoretical pI: Translated: 6.81; Mature: 6.81
Prosite motif: PS00583 PFKB_KINASES_1 ; PS00584 PFKB_KINASES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLTERERALLNLIREAPLSTPAELARRLGTSRAAVNVHVSNLIRKGALLGRGYVVAPEQ CCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCEEEEEHHHHHHHHHHHCCCCEEECCCC EARVVVVGGANVDIKARTLAPAVSGTSNPGMTRQAAGGVARNIAENLARLGIQTHLITAL CCEEEEEECCCCEEEEHHHCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH GRDAPGDLLLRETEAAGVDMRSVLRLDAPTGTYTAVLDNSGELLIAVAAMEVTAALTPAA CCCCCCCEEEEECCCCCCCHHHHHEECCCCCCEEEEEECCCCEEEEEEHHHHHHHHCHHH LNERRGLLQHASWVVADGNLSAETLTHLLTLCREAGVPVTFEPVSVPKAAHLLPALHSGL HHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHCCC APHTVTPNVAELAALTSRDVADTPAALGAAAQELHARGVQTVWVRRGDRGSLLSTPEGVT CCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCH ELPALPAQVADVTGAGDAMLAAYLAALLEGHSPAEAARHGHAAAALTVESPHTVSPTLTP HCCCCCHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHCCCCEEEEEECCCCCCCCCCCH AALRARLGSPEAADRER HHHHHHCCCCCCCCCCC >Mature Secondary Structure PLTERERALLNLIREAPLSTPAELARRLGTSRAAVNVHVSNLIRKGALLGRGYVVAPEQ CCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCEEEEEHHHHHHHHHHHCCCCEEECCCC EARVVVVGGANVDIKARTLAPAVSGTSNPGMTRQAAGGVARNIAENLARLGIQTHLITAL CCEEEEEECCCCEEEEHHHCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH GRDAPGDLLLRETEAAGVDMRSVLRLDAPTGTYTAVLDNSGELLIAVAAMEVTAALTPAA CCCCCCCEEEEECCCCCCCHHHHHEECCCCCCEEEEEECCCCEEEEEEHHHHHHHHCHHH LNERRGLLQHASWVVADGNLSAETLTHLLTLCREAGVPVTFEPVSVPKAAHLLPALHSGL HHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHCCC APHTVTPNVAELAALTSRDVADTPAALGAAAQELHARGVQTVWVRRGDRGSLLSTPEGVT CCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCH ELPALPAQVADVTGAGDAMLAAYLAALLEGHSPAEAARHGHAAAALTVESPHTVSPTLTP HCCCCCHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHCCCCEEEEEECCCCCCCCCCCH AALRARLGSPEAADRER HHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503; 2460435 [H]