| Definition | Deinococcus geothermalis DSM 11300, complete genome. |
|---|---|
| Accession | NC_008025 |
| Length | 2,467,205 |
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The map label for this gene is 94984445
Identifier: 94984445
GI number: 94984445
Start: 338569
End: 340074
Strand: Reverse
Name: 94984445
Synonym: Dgeo_0337
Alternate gene names: NA
Gene position: 340074-338569 (Counterclockwise)
Preceding gene: 94984446
Following gene: 94984443
Centisome position: 13.78
GC content: 69.72
Gene sequence:
>1506_bases ATGGGCGTGAAGGGGTGCGATCCCGAGCTGGATCTGCTGCACCGCGAGGCGGACGGTGACCTCACCGAAGCCGAGTGGGC GCAGCTGACGGCCCTATCACAGGACCCAAGCTTCGCACAGACTCGGCAGCGGCTGAGGCAGGCTACGGCAGCCCTCCGCG CCCTGCCTCCCCCCACCTTACCCCGCAGCCTCGCGCATGAGGTCGCGTCCGAGATCGCTTGGGCAGCTTGGTTGACAACT GCACCTCCACCCCCCCGACCGGCCCCGATCGCTGCACAGGTGGCAGCGGACGTGCGAACATCCAGTCCGTTGGACGCACC CCCAGGTCTGCCCCACAGCCTCGCGCCTGCTGTCGCCTCAGACGTGGCGTGGGCAGTCCGGCTGAGGCAGTCTTCCCCTT CCCTTCCGATATCGGTAGCTCAAGCAATCTCAGCGCGGATTGCGCATGAGGCGAGCGCTGAGAGAACACCGCCTGATACC GTCCTCCCCCGGCACAATCCGGCACCGCTGCTGCTGGTTGTGGGCCTGTTGATCGGGCTGACGCTGCTGGGCCTCACGAG TGCCTGGCCGAACCTGGCAGCGGGGGCGGCCGTCGCGCAGGCGCTGATCGCGCAGGTTTCTCCGCTGGCGGGGGTAGGTC TGGTGCTGCTGCTGGCCGTGAGCCTGCTGGTGGCCTGGCGGCCCACACCGGCTGTACAACGCTTTGGAGCGGCAGCCTTC GCGCTCTCGGCGGTCCTGACGCTGCCTCCGCTCTACCAGGCCTTTGGCCGTAGCGGGGTCACGGTGGGGCATGATGTCAC CGTTCACGGCCAAGTTGCAGGCAATGTGATCGCGCTGGGTGGGAACGTGATCCTGGCCTCCGACGCGCGGGTGCAAGGCG AGGTCATCACGCTGTTTGGGGACGTGCGGCGGGATCCCCAGGCGCGGGTCACCGGCCGGGTCAATGCTTTGCTTGGGCAC GCCCCGGGAGACGTGACAGCCCGCCAAACCGCACCCCCTTCGGGCCTGAGTCTGGCGACAGCCTCTGCCTTCCGGCCACT GCTGGGGTGGCTGGGTGGCGCGGCGTGGAGCCGGATCTTCGTGGTGCTGACCGGCGGCATGCTGCTGCTGCTGTTCGTCA CCGGGGCCGCTCCCCTGCTCGCGCGGCGCCAGCGCCATGCCCCGCTGCGGACCCTTGCGCTGGGGGTGCTGGCCTTGGCC CTCCTGATCGGCCCGGCGCTGGGGCTGGCACTGGCGGGTCTGCTGGTGCCCGCACTGCTGGCATGCGCCTTTGCACTGCT GCTGGTGGCAACTGGCCTCAGTGTCAGCGTCTACGATGCCGGTCGGGCAGCGGCCTATCGGCTGCGGCTGCCTGCCCCGG ATGTGGTCGGGGCTGTGCTGGGGCTGATCGCGGTCGCCTTGAGCCTCAGCCTTCCACCGCTCGCCCTGATCGGCGCCCTG GTGGGTGGCGCCTGGGGCATCGGGACGCTGCTTCTGACCCGCTCGGAAGGCCAGGGGCGGGTCTAA
Upstream 100 bases:
>100_bases CGTGCGGCTGCTTTCCAAAACCGGTGGCAAGAGTGGCGATTACACTGCACCGGACACTTGACCGGAAACTTTCTCGTTCC CTTCAACGTAAAAGGAATGT
Downstream 100 bases:
>100_bases AAACGGGTCGTGGGCCAGAACTGGCATGTTCCGGCCCACGTTGCGAGAACAGCACTCAGCCCAGAATGCGCTTGAGATGC AGGTAGATCTCGTACCAGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 501; Mature: 500
Protein sequence:
>501_residues MGVKGCDPELDLLHREADGDLTEAEWAQLTALSQDPSFAQTRQRLRQATAALRALPPPTLPRSLAHEVASEIAWAAWLTT APPPPRPAPIAAQVAADVRTSSPLDAPPGLPHSLAPAVASDVAWAVRLRQSSPSLPISVAQAISARIAHEASAERTPPDT VLPRHNPAPLLLVVGLLIGLTLLGLTSAWPNLAAGAAVAQALIAQVSPLAGVGLVLLLAVSLLVAWRPTPAVQRFGAAAF ALSAVLTLPPLYQAFGRSGVTVGHDVTVHGQVAGNVIALGGNVILASDARVQGEVITLFGDVRRDPQARVTGRVNALLGH APGDVTARQTAPPSGLSLATASAFRPLLGWLGGAAWSRIFVVLTGGMLLLLFVTGAAPLLARRQRHAPLRTLALGVLALA LLIGPALGLALAGLLVPALLACAFALLLVATGLSVSVYDAGRAAAYRLRLPAPDVVGAVLGLIAVALSLSLPPLALIGAL VGGAWGIGTLLLTRSEGQGRV
Sequences:
>Translated_501_residues MGVKGCDPELDLLHREADGDLTEAEWAQLTALSQDPSFAQTRQRLRQATAALRALPPPTLPRSLAHEVASEIAWAAWLTT APPPPRPAPIAAQVAADVRTSSPLDAPPGLPHSLAPAVASDVAWAVRLRQSSPSLPISVAQAISARIAHEASAERTPPDT VLPRHNPAPLLLVVGLLIGLTLLGLTSAWPNLAAGAAVAQALIAQVSPLAGVGLVLLLAVSLLVAWRPTPAVQRFGAAAF ALSAVLTLPPLYQAFGRSGVTVGHDVTVHGQVAGNVIALGGNVILASDARVQGEVITLFGDVRRDPQARVTGRVNALLGH APGDVTARQTAPPSGLSLATASAFRPLLGWLGGAAWSRIFVVLTGGMLLLLFVTGAAPLLARRQRHAPLRTLALGVLALA LLIGPALGLALAGLLVPALLACAFALLLVATGLSVSVYDAGRAAAYRLRLPAPDVVGAVLGLIAVALSLSLPPLALIGAL VGGAWGIGTLLLTRSEGQGRV >Mature_500_residues GVKGCDPELDLLHREADGDLTEAEWAQLTALSQDPSFAQTRQRLRQATAALRALPPPTLPRSLAHEVASEIAWAAWLTTA PPPPRPAPIAAQVAADVRTSSPLDAPPGLPHSLAPAVASDVAWAVRLRQSSPSLPISVAQAISARIAHEASAERTPPDTV LPRHNPAPLLLVVGLLIGLTLLGLTSAWPNLAAGAAVAQALIAQVSPLAGVGLVLLLAVSLLVAWRPTPAVQRFGAAAFA LSAVLTLPPLYQAFGRSGVTVGHDVTVHGQVAGNVIALGGNVILASDARVQGEVITLFGDVRRDPQARVTGRVNALLGHA PGDVTARQTAPPSGLSLATASAFRPLLGWLGGAAWSRIFVVLTGGMLLLLFVTGAAPLLARRQRHAPLRTLALGVLALAL LIGPALGLALAGLLVPALLACAFALLLVATGLSVSVYDAGRAAAYRLRLPAPDVVGAVLGLIAVALSLSLPPLALIGALV GGAWGIGTLLLTRSEGQGRV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51185; Mature: 51054
Theoretical pI: Translated: 11.19; Mature: 11.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.2 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGVKGCDPELDLLHREADGDLTEAEWAQLTALSQDPSFAQTRQRLRQATAALRALPPPTL CCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCC PRSLAHEVASEIAWAAWLTTAPPPPRPAPIAAQVAADVRTSSPLDAPPGLPHSLAPAVAS HHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH DVAWAVRLRQSSPSLPISVAQAISARIAHEASAERTPPDTVLPRHNPAPLLLVVGLLIGL HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHH TLLGLTSAWPNLAAGAAVAQALIAQVSPLAGVGLVLLLAVSLLVAWRPTPAVQRFGAAAF HHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH ALSAVLTLPPLYQAFGRSGVTVGHDVTVHGQVAGNVIALGGNVILASDARVQGEVITLFG HHHHHHHCCHHHHHHCCCCCEECCEEEEECEECCCEEEECCCEEEECCCCCCCCEEEEEH DVRRDPQARVTGRVNALLGHAPGDVTARQTAPPSGLSLATASAFRPLLGWLGGAAWSRIF HHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH VVLTGGMLLLLFVTGAAPLLARRQRHAPLRTLALGVLALALLIGPALGLALAGLLVPALL HHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ACAFALLLVATGLSVSVYDAGRAAAYRLRLPAPDVVGAVLGLIAVALSLSLPPLALIGAL HHHHHHHHHHCCCEEEEECCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCHHHHHHHH VGGAWGIGTLLLTRSEGQGRV HHCHHHHHHEEEECCCCCCCC >Mature Secondary Structure GVKGCDPELDLLHREADGDLTEAEWAQLTALSQDPSFAQTRQRLRQATAALRALPPPTL CCCCCCCHHHHHHHCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCC PRSLAHEVASEIAWAAWLTTAPPPPRPAPIAAQVAADVRTSSPLDAPPGLPHSLAPAVAS HHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH DVAWAVRLRQSSPSLPISVAQAISARIAHEASAERTPPDTVLPRHNPAPLLLVVGLLIGL HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHH TLLGLTSAWPNLAAGAAVAQALIAQVSPLAGVGLVLLLAVSLLVAWRPTPAVQRFGAAAF HHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH ALSAVLTLPPLYQAFGRSGVTVGHDVTVHGQVAGNVIALGGNVILASDARVQGEVITLFG HHHHHHHCCHHHHHHCCCCCEECCEEEEECEECCCEEEECCCEEEECCCCCCCCEEEEEH DVRRDPQARVTGRVNALLGHAPGDVTARQTAPPSGLSLATASAFRPLLGWLGGAAWSRIF HHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH VVLTGGMLLLLFVTGAAPLLARRQRHAPLRTLALGVLALALLIGPALGLALAGLLVPALL HHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ACAFALLLVATGLSVSVYDAGRAAAYRLRLPAPDVVGAVLGLIAVALSLSLPPLALIGAL HHHHHHHHHHCCCEEEEECCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCHHHHHHHH VGGAWGIGTLLLTRSEGQGRV HHCHHHHHHEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA