| Definition | Deinococcus geothermalis DSM 11300, complete genome. |
|---|---|
| Accession | NC_008025 |
| Length | 2,467,205 |
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The map label for this gene is 94984352
Identifier: 94984352
GI number: 94984352
Start: 230425
End: 230916
Strand: Reverse
Name: 94984352
Synonym: Dgeo_0244
Alternate gene names: NA
Gene position: 230916-230425 (Counterclockwise)
Preceding gene: 94984355
Following gene: 94984351
Centisome position: 9.36
GC content: 67.07
Gene sequence:
>492_bases ATGAAGGCCATGAGTCAGACCGACCCGCGCGCTGCGGCTCAGGCCCTCGCGGCCCTTGACTGGAGCCGCGCCCACCGCAC GCCCATTCAGATGCGCTACGGCGACATTGATGCGATGGGCCACCTCAACAACGCCGTGTACGTGCAGTACCTCGAAACGT CCCGGGTCATCCTGATGCGCGACCTGGGCGTCCACGACCAGGACGACCGTTCGGTGATTGCTCGCCTGGAACTCGACTAC CGCCAGGAGGTGCTGTGGGGCCAGGCCGTGGTCGTGGAATCCTTGGTGGAACGGGTGGGCCGCACGAGTTGGACCATTGT CTCGCGCCTGAGTGCAGACGGCGTGCCCTGCGCCTATGCCCGAACCGTGCAGGTGCGGGTGGATGAGGCCCACCGCCCAG AAGTCCTTCCCGAGCGCATCCGGGCGGCCTTCGCGCCCCTGTTGATTGCCTCGTCGCCAGTCGCCGAGCTGCAAGAGAGC CTGCCCGGGTGA
Upstream 100 bases:
>100_bases TGGGAGGACAGCGGAGGCGGCGGGTCGGGGGGCGTCATGCCCCAGAGCATAGCGTCCAGCTGGATGAGGAGGCAGGGAGC CCTCCTGCGGAAACCGCATA
Downstream 100 bases:
>100_bases GTCGCGCGTACTACGAAGACCGGGTGTTGTATCAGGGCGACGTCTGGGTACGCCTCGACACCCTGCCGCGCCTGCTGGCG GAAGGCTGGCGGCGCACGCT
Product: thioesterase superfamily protein
Products: NA
Alternate protein names: Thioesterase; Thioesterase Superfamily; Thioesterase Family Protein
Number of amino acids: Translated: 163; Mature: 163
Protein sequence:
>163_residues MKAMSQTDPRAAAQALAALDWSRAHRTPIQMRYGDIDAMGHLNNAVYVQYLETSRVILMRDLGVHDQDDRSVIARLELDY RQEVLWGQAVVVESLVERVGRTSWTIVSRLSADGVPCAYARTVQVRVDEAHRPEVLPERIRAAFAPLLIASSPVAELQES LPG
Sequences:
>Translated_163_residues MKAMSQTDPRAAAQALAALDWSRAHRTPIQMRYGDIDAMGHLNNAVYVQYLETSRVILMRDLGVHDQDDRSVIARLELDY RQEVLWGQAVVVESLVERVGRTSWTIVSRLSADGVPCAYARTVQVRVDEAHRPEVLPERIRAAFAPLLIASSPVAELQES LPG >Mature_163_residues MKAMSQTDPRAAAQALAALDWSRAHRTPIQMRYGDIDAMGHLNNAVYVQYLETSRVILMRDLGVHDQDDRSVIARLELDY RQEVLWGQAVVVESLVERVGRTSWTIVSRLSADGVPCAYARTVQVRVDEAHRPEVLPERIRAAFAPLLIASSPVAELQES LPG
Specific function: Unknown
COG id: COG0824
COG function: function code R; Predicted thioesterase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18190; Mature: 18190
Theoretical pI: Translated: 6.11; Mature: 6.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKAMSQTDPRAAAQALAALDWSRAHRTPIQMRYGDIDAMGHLNNAVYVQYLETSRVILMR CCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHCCCCEEEEEEECCCCEEEEE DLGVHDQDDRSVIARLELDYRQEVLWGQAVVVESLVERVGRTSWTIVSRLSADGVPCAYA CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCEEEE RTVQVRVDEAHRPEVLPERIRAAFAPLLIASSPVAELQESLPG EEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHCCC >Mature Secondary Structure MKAMSQTDPRAAAQALAALDWSRAHRTPIQMRYGDIDAMGHLNNAVYVQYLETSRVILMR CCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHCCCCEEEEEEECCCCEEEEE DLGVHDQDDRSVIARLELDYRQEVLWGQAVVVESLVERVGRTSWTIVSRLSADGVPCAYA CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCEEEE RTVQVRVDEAHRPEVLPERIRAAFAPLLIASSPVAELQESLPG EEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA