Click here to switch to the map view.

The map label for this gene is 94984345

Identifier: 94984345

GI number: 94984345

Start: 221890

End: 223875

Strand: Reverse

Name: 94984345

Synonym: Dgeo_0237

Alternate gene names: NA

Gene position: 223875-221890 (Counterclockwise)

Preceding gene: 94984346

Following gene: 94984344

Centisome position: 9.07

GC content: 65.76

Gene sequence:

>1986_bases
ATGCTCGCCGCCCTGATTCGCCAGGCCCAGCAGGCGGGCCTCAGCCCCGAGCCAGGCTTTGCGCCCAAAGAGCTGCACTG
GCTTGCGCAGCTGCACAGCGGAAAGTTCACGGGCGTCTTGCCGCTTCGTGAGGGCAAAAAAGGCCGCCAGGTTGCGCGCT
GCCCCGAGCTGAGCCAACCGGAAATGATGGCCCTGCCCAAAGCCCTGGGTCAAACCCAGGCCGCCCACTTTCTGGCGGAT
TCCTGCGGTGTGATCGCCCTGCTGCCCGAACGTGCGGGACAGGAGGTGGACACCAAGACCCAGGCCAAGCACGGAGCCTA
CGCCGCCCTCCTGGAACGCGCCGCCCAAGACCTGCCGCAGCTCCTCCCCGTGCTCGAAGTGCTGCGTGACCCCGCCGAGC
TGGCCGAGCTGCGCGCCGAGCTGGCGCAGCGGGGCGCCAAAGCCACCGATCGCCTGAGCTTTGCGGTCGACGGCCTAGAT
CTGCTGGAGAGCGAGCTTTGGCACGACTGGTGGCGCCGCTTCCGGCGTCAGGTCTTCGGACAGCCCACCACAACAGGCAC
CATGCTGGACCTCAGCAGCGGCGAAGTGGTGACGCCCGCCAAAACCCACCCCAAGCTCAACAAACTGGGCGTGGGGGCGA
TGCCCACCGGCGCTTCGCTCATCGGCTATGACAAGGAAGCGTTCAGTTCCTACGGGCTGCAAGCGGGCGAAAATGGCGCG
GTCTCCGAGGAAAATGCCGCTGCCTACCGTGCCGCGCTGGAGCATCTGCTCGCCCAGGCTCCGGTGCTGGGCCAGATGAA
AGTCGCCGTCTGGTTTGATCACCGTCAGGCGGAGGGGCAAGCGCTCATTGACGCGATTGAGAACCCCGCCACCCTCACGC
AGGCGTCCGAAACCTTCAGTTGGGACGACTGGGACGACAGCGCGTCCGTCGCGGTGGTGCAGACGCCCGAGCAACAAGCG
GCTGTGGCCCACACGCGCGCTCAGCAGCTGCTCAGCGCCCTGCGCCGCGGCGAGACGCCGCCCACGCTCACCGCTCAGTA
CTTCGCCCTTGCCATCAGCGGTGCAAGTGGCCGAGCGATGGTGCGCGACTGGCACACCGGCAGCCTGGAACACCTCGCCG
AAGCCGTGGCCACCTGGTTTGAAGACCTCGCCATCACCAACCTGAGCGGGAAGCGGGCCAAGCGTCCCCGGTTCTTTAGC
CTGCTGATGAATATCCAGCGGCCCAAGCCGCAGTCGACATCTATGGACGACTACCTCAAGCCCATTCGCAACCTTCAGCT
TCCGTTGTGGCGAGCCGCGCTCGACCCGAATGCACCCATTCCTTTTTCTGCGGTCGCCAAGTTGATGGAGGCCCACAAAG
CCCAGGTGATGACCGGCCAATTCAGCGAGGCCCTGAGCCGTGATGGGGACGGCGAGGACAAAGGCCGTATCTACACGCGC
ATGGCGCTCTTGAAGGCCTATCACAACCGCAAGGCCCGCCGGCAACTCGCCCGCGGACAAGGAGGTTTTTTGATGTCCAG
TTCGGTTGATCCCCACCACCCCAGCCCCGCCTACCACTGCGGACGGCTGATGTACCTGCTCGCCAACGTGCAAGACGCCC
AGGGAAGCGACGTCAACGCTGGCGTCGTACAGCGCTACTACGGCGCGGCCAGCAGCACGCCAGCCCTGGTACTGGGCCGC
CTGACCCGCCTCAGCCAGCACCACCTGGCCAAGATCGCGCGCGAGAAGCCCGGCCTGGCTTTGACGCTCGAACGGGACAT
CGCCGCCGTGTGGTCCGCGCTTGGCCACGACCTCCCCAAAACACTCTCGCTCGAGGAGCAAAGCCTCTTTGCCCTGGGCT
ACTACCAGCAACTGGCAGACAGCGTGGCTCGCCGGCAGGATCTGGCCGCTCAGCGCAAGGCCGCCACGGCACAAGCTGAC
CCCCATCCTGAAACTTCCCCTCTCGCCGAGACCACCCAGACCGAACAGACCGCACAAGGAGAATAA

Upstream 100 bases:

>100_bases
ACGCACCCCACATCAGCCTCTTTCAGGCAAATATTCGCGGCGGCGTGCTGGAGGTGCCGCCCTACCACAGCGCTGACGTG
CGCAAACCTGGAGGTCACTG

Downstream 100 bases:

>100_bases
CCATGACGCAGACCTCTTCCCCCCTCCGCAACCGTTATGAGTTTCTGCTGCTGTTCGACGTGGAAAATGGCAACCCGAAC
GGCGACCCCGACAGCGGCAA

Product: CRISPR-associated Csd1 family protein

Products: NA

Alternate protein names: CRISPR-Associated RAMP Csd1 Family Protein; CRISPR-Associated Csd1 Family Protein; Csd1 Family CRISPR-Associated Protein; Crispr-Protein; CRISPR-Associated Protein; CRISPR-Associated Protein Csd2 Family; Crispr-Associated Protein Csd1 Family

Number of amino acids: Translated: 661; Mature: 661

Protein sequence:

>661_residues
MLAALIRQAQQAGLSPEPGFAPKELHWLAQLHSGKFTGVLPLREGKKGRQVARCPELSQPEMMALPKALGQTQAAHFLAD
SCGVIALLPERAGQEVDTKTQAKHGAYAALLERAAQDLPQLLPVLEVLRDPAELAELRAELAQRGAKATDRLSFAVDGLD
LLESELWHDWWRRFRRQVFGQPTTTGTMLDLSSGEVVTPAKTHPKLNKLGVGAMPTGASLIGYDKEAFSSYGLQAGENGA
VSEENAAAYRAALEHLLAQAPVLGQMKVAVWFDHRQAEGQALIDAIENPATLTQASETFSWDDWDDSASVAVVQTPEQQA
AVAHTRAQQLLSALRRGETPPTLTAQYFALAISGASGRAMVRDWHTGSLEHLAEAVATWFEDLAITNLSGKRAKRPRFFS
LLMNIQRPKPQSTSMDDYLKPIRNLQLPLWRAALDPNAPIPFSAVAKLMEAHKAQVMTGQFSEALSRDGDGEDKGRIYTR
MALLKAYHNRKARRQLARGQGGFLMSSSVDPHHPSPAYHCGRLMYLLANVQDAQGSDVNAGVVQRYYGAASSTPALVLGR
LTRLSQHHLAKIAREKPGLALTLERDIAAVWSALGHDLPKTLSLEEQSLFALGYYQQLADSVARRQDLAAQRKAATAQAD
PHPETSPLAETTQTEQTAQGE

Sequences:

>Translated_661_residues
MLAALIRQAQQAGLSPEPGFAPKELHWLAQLHSGKFTGVLPLREGKKGRQVARCPELSQPEMMALPKALGQTQAAHFLAD
SCGVIALLPERAGQEVDTKTQAKHGAYAALLERAAQDLPQLLPVLEVLRDPAELAELRAELAQRGAKATDRLSFAVDGLD
LLESELWHDWWRRFRRQVFGQPTTTGTMLDLSSGEVVTPAKTHPKLNKLGVGAMPTGASLIGYDKEAFSSYGLQAGENGA
VSEENAAAYRAALEHLLAQAPVLGQMKVAVWFDHRQAEGQALIDAIENPATLTQASETFSWDDWDDSASVAVVQTPEQQA
AVAHTRAQQLLSALRRGETPPTLTAQYFALAISGASGRAMVRDWHTGSLEHLAEAVATWFEDLAITNLSGKRAKRPRFFS
LLMNIQRPKPQSTSMDDYLKPIRNLQLPLWRAALDPNAPIPFSAVAKLMEAHKAQVMTGQFSEALSRDGDGEDKGRIYTR
MALLKAYHNRKARRQLARGQGGFLMSSSVDPHHPSPAYHCGRLMYLLANVQDAQGSDVNAGVVQRYYGAASSTPALVLGR
LTRLSQHHLAKIAREKPGLALTLERDIAAVWSALGHDLPKTLSLEEQSLFALGYYQQLADSVARRQDLAAQRKAATAQAD
PHPETSPLAETTQTEQTAQGE
>Mature_661_residues
MLAALIRQAQQAGLSPEPGFAPKELHWLAQLHSGKFTGVLPLREGKKGRQVARCPELSQPEMMALPKALGQTQAAHFLAD
SCGVIALLPERAGQEVDTKTQAKHGAYAALLERAAQDLPQLLPVLEVLRDPAELAELRAELAQRGAKATDRLSFAVDGLD
LLESELWHDWWRRFRRQVFGQPTTTGTMLDLSSGEVVTPAKTHPKLNKLGVGAMPTGASLIGYDKEAFSSYGLQAGENGA
VSEENAAAYRAALEHLLAQAPVLGQMKVAVWFDHRQAEGQALIDAIENPATLTQASETFSWDDWDDSASVAVVQTPEQQA
AVAHTRAQQLLSALRRGETPPTLTAQYFALAISGASGRAMVRDWHTGSLEHLAEAVATWFEDLAITNLSGKRAKRPRFFS
LLMNIQRPKPQSTSMDDYLKPIRNLQLPLWRAALDPNAPIPFSAVAKLMEAHKAQVMTGQFSEALSRDGDGEDKGRIYTR
MALLKAYHNRKARRQLARGQGGFLMSSSVDPHHPSPAYHCGRLMYLLANVQDAQGSDVNAGVVQRYYGAASSTPALVLGR
LTRLSQHHLAKIAREKPGLALTLERDIAAVWSALGHDLPKTLSLEEQSLFALGYYQQLADSVARRQDLAAQRKAATAQAD
PHPETSPLAETTQTEQTAQGE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 72043; Mature: 72043

Theoretical pI: Translated: 7.39; Mature: 7.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAALIRQAQQAGLSPEPGFAPKELHWLAQLHSGKFTGVLPLREGKKGRQVARCPELSQP
CHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHCCCCCCCC
EMMALPKALGQTQAAHFLADSCGVIALLPERAGQEVDTKTQAKHGAYAALLERAAQDLPQ
HHHHHHHHHHHHHHHHHHHHCCCEEEECCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
LLPVLEVLRDPAELAELRAELAQRGAKATDRLSFAVDGLDLLESELWHDWWRRFRRQVFG
HHHHHHHHHCHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCC
QPTTTGTMLDLSSGEVVTPAKTHPKLNKLGVGAMPTGASLIGYDKEAFSSYGLQAGENGA
CCCCCCEEEECCCCCEECCCCCCCCHHHCCCCCCCCCCHHCCCCHHHHHHCCCCCCCCCC
VSEENAAAYRAALEHLLAQAPVLGQMKVAVWFDHRQAEGQALIDAIENPATLTQASETFS
CCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHCCCHHHHHCCCCCC
WDDWDDSASVAVVQTPEQQAAVAHTRAQQLLSALRRGETPPTLTAQYFALAISGASGRAM
CCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHEEHHHEEECCCCCCE
VRDWHTGSLEHLAEAVATWFEDLAITNLSGKRAKRPRFFSLLMNIQRPKPQSTSMDDYLK
EEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHH
PIRNLQLPLWRAALDPNAPIPFSAVAKLMEAHKAQVMTGQFSEALSRDGDGEDKGRIYTR
HHHHCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
MALLKAYHNRKARRQLARGQGGFLMSSSVDPHHPSPAYHCGRLMYLLANVQDAQGSDVNA
HHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCH
GVVQRYYGAASSTPALVLGRLTRLSQHHLAKIAREKPGLALTLERDIAAVWSALGHDLPK
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHCCCCCC
TLSLEEQSLFALGYYQQLADSVARRQDLAAQRKAATAQADPHPETSPLAETTQTEQTAQG
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCC
E
C
>Mature Secondary Structure
MLAALIRQAQQAGLSPEPGFAPKELHWLAQLHSGKFTGVLPLREGKKGRQVARCPELSQP
CHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHCCCCCCCC
EMMALPKALGQTQAAHFLADSCGVIALLPERAGQEVDTKTQAKHGAYAALLERAAQDLPQ
HHHHHHHHHHHHHHHHHHHHCCCEEEECCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
LLPVLEVLRDPAELAELRAELAQRGAKATDRLSFAVDGLDLLESELWHDWWRRFRRQVFG
HHHHHHHHHCHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCC
QPTTTGTMLDLSSGEVVTPAKTHPKLNKLGVGAMPTGASLIGYDKEAFSSYGLQAGENGA
CCCCCCEEEECCCCCEECCCCCCCCHHHCCCCCCCCCCHHCCCCHHHHHHCCCCCCCCCC
VSEENAAAYRAALEHLLAQAPVLGQMKVAVWFDHRQAEGQALIDAIENPATLTQASETFS
CCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHCCCHHHHHCCCCCC
WDDWDDSASVAVVQTPEQQAAVAHTRAQQLLSALRRGETPPTLTAQYFALAISGASGRAM
CCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHEEHHHEEECCCCCCE
VRDWHTGSLEHLAEAVATWFEDLAITNLSGKRAKRPRFFSLLMNIQRPKPQSTSMDDYLK
EEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHH
PIRNLQLPLWRAALDPNAPIPFSAVAKLMEAHKAQVMTGQFSEALSRDGDGEDKGRIYTR
HHHHCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
MALLKAYHNRKARRQLARGQGGFLMSSSVDPHHPSPAYHCGRLMYLLANVQDAQGSDVNA
HHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCH
GVVQRYYGAASSTPALVLGRLTRLSQHHLAKIAREKPGLALTLERDIAAVWSALGHDLPK
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHCCCCCC
TLSLEEQSLFALGYYQQLADSVARRQDLAAQRKAATAQADPHPETSPLAETTQTEQTAQG
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCC
E
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA