| Definition | Deinococcus geothermalis DSM 11300, complete genome. |
|---|---|
| Accession | NC_008025 |
| Length | 2,467,205 |
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The map label for this gene is cvrA [H]
Identifier: 94984330
GI number: 94984330
Start: 205968
End: 207467
Strand: Reverse
Name: cvrA [H]
Synonym: Dgeo_0222
Alternate gene names: 94984330
Gene position: 207467-205968 (Counterclockwise)
Preceding gene: 94984334
Following gene: 94984329
Centisome position: 8.41
GC content: 66.07
Gene sequence:
>1500_bases ATGGGTGAGGTTCACGCGGAAGTTTATCTGCTCGCGGCAGGCGTCCTGCTGCTGGCGAGCCTGGTGGTGAGCCGTCTGGG TGGGCGGCTGGGCATTCCGGGGCTGCTGCTGTTTCTGGGGGTAGGGATGGCGGCAGGTTCAGACGGGCTGGGTATCCAGT TCAGTGATTACCGCTTTGCCCAAGCACTCGGCACGGTTGCGCTGTGTTTTATCCTCTTTCAGGGCGGCCTGACCACCAAC TGGCGCGAAACGCGGCCTGTCATTTGGCGTGGCCTGAGTTTGGCAACCCTGGGCGTGCTGCTGACTGCGGGCGTGATGGC GGCCTTTGCGCACTTCCTGCTGGCGTGGCCTTGGCTGGCGGCCTGGATGCTGGGTGCCGTGGTGAGCAGCACCGACGCCA GCGCGGTCTTTTCGGTGCTCAAGGAACGCGCGCTGGGCCTTAGGGGAGACATCGCTCCGCTGCTGGAGTTTGAGTCGGGC GGCAACGACCCGATGGCGGTCTTTCTGACTGTCGGGATTCTCGAACTGATCGCCCACCCCGGCATGAGCGTGCTGGAGAT CGTTCCGCTGTTTTTGCGGCAGATGCTGCTGGGGGCGCTGCTGGGTGCCGGACTGGGCCACGCGGCGCTGTGGGTGCTCA ACCGGCTGCAACTCCAGTTCGAGGGGCTGTACTCGGTCCTCAGCCTGGCGCTGGCCCTCACCATCTTCAGCGCCACCGCT GTCGCGGGGGGCAGCGGCTTTCTGGCGATCTACATCGCGGGGGTGATCCTGGGCAATGCGGACTTCATCCACAAGCGCAG CCTGCTCGCCTTTCACGACGTCCTGGCTTGGTTGATGCAGGTGGTGATGTTCCTCACGCTGGGGTTGCTGGTCAATCCAC ACGAACTGTGGCCGGTCGCCGGGCTGGGCCTATCCTTTGCGCTGGTGCTGGCGTTTGTGGCGCGGCCGCTGGCGGTGTAT CTCGGCCTGGCGGGGTCCCCTATGCCGCTCAACCAGAAGACGATGGTGGCCTGGGTCGGCCTGCGCGGCGCGGTGCCGAT CGTGCTGGCGACCTTTCCGCTGCTGGCGGGGGTGCCCCAGGCGCACACGCTGTTCAACGTGGTGTTCTTCATCGTCCTGA CCAGCGTGCTGCTCCAGGGCACCACCCTGCCCCTGGTGGCAACCTGGCTGGGCGTGCGCGAGCCTCTGCCTCTGCCGGCG GCCAACCCTATCAGCTACACCCCCACCGGGCATAGCCGCAACGCGCTGGTAGAGATCGAGGTCCAACAGGGCAGCGACGC CGACGGACAGCGCATCGTGGACCTGCACCTGCCTCCGGACGCTCTGGTGATCCTGATTCACCGCGGCGGCGAGTTCCTGA TTCCCAAGGGCGCGACCCGGCTGGAGGCCGGCGATAGCCTGCAGGTGCTGGCCCGTGAGGACGAGCTGCGCGAGGTGCGG CGGCGACTGGAAGTGAAGGGCAACTTGGAACACCATAACGTGGAACACCGCACAGGGTGA
Upstream 100 bases:
>100_bases GCGAAGGTGTACCGGCCCGGGGCGTCATGCCCTCCAGGGTAAAGGGCCAAGAAGGGGGGGTCAAGCCGGGTCGTCCCCCA CTCTGTGAAACCATAGGCCG
Downstream 100 bases:
>100_bases GGCGTTTCGCCCGCGCCCGTCCCCACTGCTGAGACAGCCCCCCTGCCGCCCCCCGGCGCGGGTGTTACCGTACCCCCATG ACCACCGCCGAGCCATCCAA
Product: potassium/proton antiporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 499; Mature: 498
Protein sequence:
>499_residues MGEVHAEVYLLAAGVLLLASLVVSRLGGRLGIPGLLLFLGVGMAAGSDGLGIQFSDYRFAQALGTVALCFILFQGGLTTN WRETRPVIWRGLSLATLGVLLTAGVMAAFAHFLLAWPWLAAWMLGAVVSSTDASAVFSVLKERALGLRGDIAPLLEFESG GNDPMAVFLTVGILELIAHPGMSVLEIVPLFLRQMLLGALLGAGLGHAALWVLNRLQLQFEGLYSVLSLALALTIFSATA VAGGSGFLAIYIAGVILGNADFIHKRSLLAFHDVLAWLMQVVMFLTLGLLVNPHELWPVAGLGLSFALVLAFVARPLAVY LGLAGSPMPLNQKTMVAWVGLRGAVPIVLATFPLLAGVPQAHTLFNVVFFIVLTSVLLQGTTLPLVATWLGVREPLPLPA ANPISYTPTGHSRNALVEIEVQQGSDADGQRIVDLHLPPDALVILIHRGGEFLIPKGATRLEAGDSLQVLAREDELREVR RRLEVKGNLEHHNVEHRTG
Sequences:
>Translated_499_residues MGEVHAEVYLLAAGVLLLASLVVSRLGGRLGIPGLLLFLGVGMAAGSDGLGIQFSDYRFAQALGTVALCFILFQGGLTTN WRETRPVIWRGLSLATLGVLLTAGVMAAFAHFLLAWPWLAAWMLGAVVSSTDASAVFSVLKERALGLRGDIAPLLEFESG GNDPMAVFLTVGILELIAHPGMSVLEIVPLFLRQMLLGALLGAGLGHAALWVLNRLQLQFEGLYSVLSLALALTIFSATA VAGGSGFLAIYIAGVILGNADFIHKRSLLAFHDVLAWLMQVVMFLTLGLLVNPHELWPVAGLGLSFALVLAFVARPLAVY LGLAGSPMPLNQKTMVAWVGLRGAVPIVLATFPLLAGVPQAHTLFNVVFFIVLTSVLLQGTTLPLVATWLGVREPLPLPA ANPISYTPTGHSRNALVEIEVQQGSDADGQRIVDLHLPPDALVILIHRGGEFLIPKGATRLEAGDSLQVLAREDELREVR RRLEVKGNLEHHNVEHRTG >Mature_498_residues GEVHAEVYLLAAGVLLLASLVVSRLGGRLGIPGLLLFLGVGMAAGSDGLGIQFSDYRFAQALGTVALCFILFQGGLTTNW RETRPVIWRGLSLATLGVLLTAGVMAAFAHFLLAWPWLAAWMLGAVVSSTDASAVFSVLKERALGLRGDIAPLLEFESGG NDPMAVFLTVGILELIAHPGMSVLEIVPLFLRQMLLGALLGAGLGHAALWVLNRLQLQFEGLYSVLSLALALTIFSATAV AGGSGFLAIYIAGVILGNADFIHKRSLLAFHDVLAWLMQVVMFLTLGLLVNPHELWPVAGLGLSFALVLAFVARPLAVYL GLAGSPMPLNQKTMVAWVGLRGAVPIVLATFPLLAGVPQAHTLFNVVFFIVLTSVLLQGTTLPLVATWLGVREPLPLPAA NPISYTPTGHSRNALVEIEVQQGSDADGQRIVDLHLPPDALVILIHRGGEFLIPKGATRLEAGDSLQVLAREDELREVRR RLEVKGNLEHHNVEHRTG
Specific function: Participates in control of cell volume in low-osmolarity conditions [H]
COG id: COG3263
COG function: function code P; NhaP-type Na+/H+ and K+/H+ antiporters with a unique C-terminal domain
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 RCK C-terminal domain [H]
Homologues:
Organism=Escherichia coli, GI87081854, Length=452, Percent_Identity=41.8141592920354, Blast_Score=274, Evalue=8e-75,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018421 - InterPro: IPR006153 - InterPro: IPR018422 - InterPro: IPR016169 - InterPro: IPR006037 - InterPro: IPR005170 [H]
Pfam domain/function: PF03471 CorC_HlyC; PF00999 Na_H_Exchanger; PF02080 TrkA_C [H]
EC number: NA
Molecular weight: Translated: 53193; Mature: 53061
Theoretical pI: Translated: 6.76; Mature: 6.76
Prosite motif: PS00687 ALDEHYDE_DEHYDR_GLU
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGEVHAEVYLLAAGVLLLASLVVSRLGGRLGIPGLLLFLGVGMAAGSDGLGIQFSDYRFA CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCEEECCHHHH QALGTVALCFILFQGGLTTNWRETRPVIWRGLSLATLGVLLTAGVMAAFAHFLLAWPWLA HHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AWMLGAVVSSTDASAVFSVLKERALGLRGDIAPLLEFESGGNDPMAVFLTVGILELIAHP HHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHEECCCCCCHHHHHHHHHHHHHHHCC GMSVLEIVPLFLRQMLLGALLGAGLGHAALWVLNRLQLQFEGLYSVLSLALALTIFSATA CHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VAGGSGFLAIYIAGVILGNADFIHKRSLLAFHDVLAWLMQVVMFLTLGLLVNPHELWPVA HCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHH GLGLSFALVLAFVARPLAVYLGLAGSPMPLNQKTMVAWVGLRGAVPIVLATFPLLAGVPQ HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCH AHTLFNVVFFIVLTSVLLQGTTLPLVATWLGVREPLPLPAANPISYTPTGHSRNALVEIE HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEE VQQGSDADGQRIVDLHLPPDALVILIHRGGEFLIPKGATRLEAGDSLQVLAREDELREVR EECCCCCCCCEEEEEECCCCEEEEEEECCCCEEECCCCCCCCCCCCHHHHHCHHHHHHHH RRLEVKGNLEHHNVEHRTG HHHHHCCCCCCCCCCCCCC >Mature Secondary Structure GEVHAEVYLLAAGVLLLASLVVSRLGGRLGIPGLLLFLGVGMAAGSDGLGIQFSDYRFA CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCEEECCHHHH QALGTVALCFILFQGGLTTNWRETRPVIWRGLSLATLGVLLTAGVMAAFAHFLLAWPWLA HHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AWMLGAVVSSTDASAVFSVLKERALGLRGDIAPLLEFESGGNDPMAVFLTVGILELIAHP HHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHEECCCCCCHHHHHHHHHHHHHHHCC GMSVLEIVPLFLRQMLLGALLGAGLGHAALWVLNRLQLQFEGLYSVLSLALALTIFSATA CHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VAGGSGFLAIYIAGVILGNADFIHKRSLLAFHDVLAWLMQVVMFLTLGLLVNPHELWPVA HCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHH GLGLSFALVLAFVARPLAVYLGLAGSPMPLNQKTMVAWVGLRGAVPIVLATFPLLAGVPQ HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCH AHTLFNVVFFIVLTSVLLQGTTLPLVATWLGVREPLPLPAANPISYTPTGHSRNALVEIE HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEE VQQGSDADGQRIVDLHLPPDALVILIHRGGEFLIPKGATRLEAGDSLQVLAREDELREVR EECCCCCCCCEEEEEECCCCEEEEEEECCCCEEECCCCCCCCCCCCHHHHHCHHHHHHHH RRLEVKGNLEHHNVEHRTG HHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA