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The map label for this gene is rpfG [H]

Identifier: 94984328

GI number: 94984328

Start: 203455

End: 204570

Strand: Reverse

Name: rpfG [H]

Synonym: Dgeo_0220

Alternate gene names: 94984328

Gene position: 204570-203455 (Counterclockwise)

Preceding gene: 94984329

Following gene: 94984326

Centisome position: 8.29

GC content: 69.44

Gene sequence:

>1116_bases
ATGACCGCCATCTCCCGTGAGGTCCCCCGTACGCCTCACGACCTGTCGCTGTACCTGACCCGCCTGGGCCTGACCGCCCC
GGACCTGGGCAGCGCGATGCAACCGGTCTTGGACGTCCTGGTGAGCCGAACGGCGGCGGTCGGGGCGGGGTATTTTCAGC
TGCGCGACAGCACCCTGACTTACCAGGCGCGGGCCGCCAGCGGGGACCTACCGCAGGGTCCACTCATGGAGGCGCTACTC
GCACACGGGCTACCGCCCGAGCTGCCGCTGGTGCAGGCACTGGAGGCGGCGGACGGAGCGCTCTTTTTTGAGGACACGCG
CCTTGACCCGCAGGCGGCGGGCTTTGCTGACCTGGGTGTGCTGGCGCTGACGGCGGCGCCAGTGCACAACCAGAGCGGGC
GGCTGGTGGGCGCACTGCTTTCGCATGTCTTTGCGCCGCATCCCTGGTCGGCGGAGGAGCGGCAGCTGGTGAGTACCGTC
ACTGGGCTGCTGACCCTGCTGGCCGCCCGGCTGGACGCCGAGGAGCGCGAGCGCGCGGCCCACGAGAGCGCTCTGCGGGC
GCTGGGCCTGATGCTGGAAGCCCGCGATACCGAGACACAGGGACATACCGACCGGGTAACGGCGCTGGCGCTGCGCCTGG
GCCGCGCTCTGGGGCTGAGTGACACCGAGCTGCGCGACCTGCGCTGGGGCGCCTACCTGCACGACATCGGCAAAATCGCC
ATTCCCGACGCAATCCTGCATTGCCCCGGCACCCTGGACCTGGCGGCGTGGGCCCGCATGCAAGAACATGTCAACGAGGG
TACCCGGCTCGCAGCGCAGTTGCCCTTCCTGCCCCGGGCGGCACTCGATGTGATTGCCTGTCACCACGAATGCTGGGACG
GCAGCGGCTATCCCCGCGGTCTGGCGGGTGAGGCGATTCCACGGCACGCCCGCATCTTCGCCGCCTGTGACGTGTACGAC
GCACTGGTGAGCGCGCGTCCCTACAAACGGGCCTGGACCCATGCCGAGGCCACCGCCTATCTGGAACAGCGGAGCGGCCA
CCAGTTCGACCCGGTGATTGTGCGGGCACTGCTGCGCGTGCTGGAAGACGAGGACTCAGCCGCCGCAAACGCCTGA

Upstream 100 bases:

>100_bases
CAGCTTTCCTCTGCCCTGAGCGGGGCTGCCTTCCCACGCCGCCCCATGGGGCCTTGCGCTGCCAGAACTCTGTGAGGTTT
CTCGCGTTAAGCTGCCCTTA

Downstream 100 bases:

>100_bases
GTGTCTAGACCGGTGTCAGCGTCAACACCGTCACTTCCGGCGGGCAAAGGTTGCGCAAGGGCAGGCCGCTGGTGCCCAGG
CCCCGGCTGACATAGGCGGG

Product: metal dependent phosphohydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 371; Mature: 370

Protein sequence:

>371_residues
MTAISREVPRTPHDLSLYLTRLGLTAPDLGSAMQPVLDVLVSRTAAVGAGYFQLRDSTLTYQARAASGDLPQGPLMEALL
AHGLPPELPLVQALEAADGALFFEDTRLDPQAAGFADLGVLALTAAPVHNQSGRLVGALLSHVFAPHPWSAEERQLVSTV
TGLLTLLAARLDAEERERAAHESALRALGLMLEARDTETQGHTDRVTALALRLGRALGLSDTELRDLRWGAYLHDIGKIA
IPDAILHCPGTLDLAAWARMQEHVNEGTRLAAQLPFLPRAALDVIACHHECWDGSGYPRGLAGEAIPRHARIFAACDVYD
ALVSARPYKRAWTHAEATAYLEQRSGHQFDPVIVRALLRVLEDEDSAAANA

Sequences:

>Translated_371_residues
MTAISREVPRTPHDLSLYLTRLGLTAPDLGSAMQPVLDVLVSRTAAVGAGYFQLRDSTLTYQARAASGDLPQGPLMEALL
AHGLPPELPLVQALEAADGALFFEDTRLDPQAAGFADLGVLALTAAPVHNQSGRLVGALLSHVFAPHPWSAEERQLVSTV
TGLLTLLAARLDAEERERAAHESALRALGLMLEARDTETQGHTDRVTALALRLGRALGLSDTELRDLRWGAYLHDIGKIA
IPDAILHCPGTLDLAAWARMQEHVNEGTRLAAQLPFLPRAALDVIACHHECWDGSGYPRGLAGEAIPRHARIFAACDVYD
ALVSARPYKRAWTHAEATAYLEQRSGHQFDPVIVRALLRVLEDEDSAAANA
>Mature_370_residues
TAISREVPRTPHDLSLYLTRLGLTAPDLGSAMQPVLDVLVSRTAAVGAGYFQLRDSTLTYQARAASGDLPQGPLMEALLA
HGLPPELPLVQALEAADGALFFEDTRLDPQAAGFADLGVLALTAAPVHNQSGRLVGALLSHVFAPHPWSAEERQLVSTVT
GLLTLLAARLDAEERERAAHESALRALGLMLEARDTETQGHTDRVTALALRLGRALGLSDTELRDLRWGAYLHDIGKIAI
PDAILHCPGTLDLAAWARMQEHVNEGTRLAAQLPFLPRAALDVIACHHECWDGSGYPRGLAGEAIPRHARIFAACDVYDA
LVSARPYKRAWTHAEATAYLEQRSGHQFDPVIVRALLRVLEDEDSAAANA

Specific function: Positively regulates the synthesis of extracellular enzymes and extracellular polysaccharides. The cell-cell signaling system encoded by rpf genes is required for full virulence and is implicated in regulation of the formation and dispersal of biofilms [H

COG id: COG2206

COG function: function code T; HD-GYP domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR003607
- InterPro:   IPR001789 [H]

Pfam domain/function: PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 40008; Mature: 39877

Theoretical pI: Translated: 5.68; Mature: 5.68

Prosite motif: PS00053 RIBOSOMAL_S8

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAISREVPRTPHDLSLYLTRLGLTAPDLGSAMQPVLDVLVSRTAAVGAGYFQLRDSTLT
CCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCEEE
YQARAASGDLPQGPLMEALLAHGLPPELPLVQALEAADGALFFEDTRLDPQAAGFADLGV
EEEECCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHCCCCEEEECCCCCHHHCCHHHHHH
LALTAAPVHNQSGRLVGALLSHVFAPHPWSAEERQLVSTVTGLLTLLAARLDAEERERAA
HHHHCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
HESALRALGLMLEARDTETQGHTDRVTALALRLGRALGLSDTELRDLRWGAYLHDIGKIA
HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHH
IPDAILHCPGTLDLAAWARMQEHVNEGTRLAAQLPFLPRAALDVIACHHECWDGSGYPRG
HCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCC
LAGEAIPRHARIFAACDVYDALVSARPYKRAWTHAEATAYLEQRSGHQFDPVIVRALLRV
CCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
LEDEDSAAANA
HCCCCCCCCCC
>Mature Secondary Structure 
TAISREVPRTPHDLSLYLTRLGLTAPDLGSAMQPVLDVLVSRTAAVGAGYFQLRDSTLT
CCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCEEE
YQARAASGDLPQGPLMEALLAHGLPPELPLVQALEAADGALFFEDTRLDPQAAGFADLGV
EEEECCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHCCCCEEEECCCCCHHHCCHHHHHH
LALTAAPVHNQSGRLVGALLSHVFAPHPWSAEERQLVSTVTGLLTLLAARLDAEERERAA
HHHHCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
HESALRALGLMLEARDTETQGHTDRVTALALRLGRALGLSDTELRDLRWGAYLHDIGKIA
HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHH
IPDAILHCPGTLDLAAWARMQEHVNEGTRLAAQLPFLPRAALDVIACHHECWDGSGYPRG
HCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCC
LAGEAIPRHARIFAACDVYDALVSARPYKRAWTHAEATAYLEQRSGHQFDPVIVRALLRV
CCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
LEDEDSAAANA
HCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11123673 [H]