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The map label for this gene is yvfS [H]

Identifier: 94984293

GI number: 94984293

Start: 173740

End: 174537

Strand: Reverse

Name: yvfS [H]

Synonym: Dgeo_0185

Alternate gene names: 94984293

Gene position: 174537-173740 (Counterclockwise)

Preceding gene: 94984294

Following gene: 94984292

Centisome position: 7.07

GC content: 66.29

Gene sequence:

>798_bases
ATGACCACCTTCGCCCCCACCGCTTCTGTCCCGACGCGCCGCGTCCCAGTTCTGCCGCTCCTCACCCAGCTCGTCTTGGC
CGAATTGCGCCGCATGGCCCGCAGCCCGATGTTCGCAGTCGGCACACTGGGCTTTCCGGTGCTGTGGTTCGCGCTGTTCG
CCCTGCCCCACGTGCACAAGACAATGGATTCGGGCGCGAATGTCGGCCAGTATCTGCTCGTGAGTTTTGCCACCTATGCG
CTGCTGTCGCTGGCGATGTTCTCGTTCGGGGCAGCGGTGGCCAACGAGCGGACGGGCGGCTGGTTGCGGCTGCTGCGGGC
TTCGCCCCTGCCCGCGACGCTGTATCTGGCCGCCAAGCTGCTGGCCGCCCTCGTCTTCAGCGCGTTGAGCCTGACGCTGC
TGTACGCCTTTGCCCACTTTGCGGGCGGCGTGACCTTCCCCGTTGGGCAGGGCCTCCTGATTGCGGGTAAGCTGCTGGTT
GGCATGATCCCGCTGATCGCACTGGGCCTGTGCATCGGCTTTCTGAGCAACCCAGCGAGCGCCAGCGTCCTAGCAAACAT
CCTCAGTGTGATCGTCTCCTTTGGGTCGGGGCTGTTTGTGCCGCTGGACCAACTCCCCAAAGTCGTGCAGAATCTCGCGC
CCTACCTTCCGAGTTATCACCTGGCGCAGCTCGGCTGGAGCGCCGTCACGGGGCAGGGGAGCAGCGGCAGCCACTGGGCT
TGGCTGGCTGGGTATACGCTGGTCTGCGGCGGCGTGGCGGTTTGGGCCTACCGCCGGGACGAGGCACGCGGGCAGTAG

Upstream 100 bases:

>100_bases
GCTTGCCCTCTTTCTGGTGTTCGTGACCTACCAGGTGGTCTATGCCTGGCTGGTGCTGCGTGTCGCCCGTTCTTCCCGCC
TTGCTTGAGGAGGTTTCATC

Downstream 100 bases:

>100_bases
GCGAGCCGGGGATGTGTCTTCTGGGCACTCCCGGCACCCCGAGAAAGAGGACGCGGCATGCAGGCGCGCAAGCAGAAAAT
GAACCCCTGGGACTTCTTCC

Product: ABC-2 type transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 265; Mature: 264

Protein sequence:

>265_residues
MTTFAPTASVPTRRVPVLPLLTQLVLAELRRMARSPMFAVGTLGFPVLWFALFALPHVHKTMDSGANVGQYLLVSFATYA
LLSLAMFSFGAAVANERTGGWLRLLRASPLPATLYLAAKLLAALVFSALSLTLLYAFAHFAGGVTFPVGQGLLIAGKLLV
GMIPLIALGLCIGFLSNPASASVLANILSVIVSFGSGLFVPLDQLPKVVQNLAPYLPSYHLAQLGWSAVTGQGSSGSHWA
WLAGYTLVCGGVAVWAYRRDEARGQ

Sequences:

>Translated_265_residues
MTTFAPTASVPTRRVPVLPLLTQLVLAELRRMARSPMFAVGTLGFPVLWFALFALPHVHKTMDSGANVGQYLLVSFATYA
LLSLAMFSFGAAVANERTGGWLRLLRASPLPATLYLAAKLLAALVFSALSLTLLYAFAHFAGGVTFPVGQGLLIAGKLLV
GMIPLIALGLCIGFLSNPASASVLANILSVIVSFGSGLFVPLDQLPKVVQNLAPYLPSYHLAQLGWSAVTGQGSSGSHWA
WLAGYTLVCGGVAVWAYRRDEARGQ
>Mature_264_residues
TTFAPTASVPTRRVPVLPLLTQLVLAELRRMARSPMFAVGTLGFPVLWFALFALPHVHKTMDSGANVGQYLLVSFATYAL
LSLAMFSFGAAVANERTGGWLRLLRASPLPATLYLAAKLLAALVFSALSLTLLYAFAHFAGGVTFPVGQGLLIAGKLLVG
MIPLIALGLCIGFLSNPASASVLANILSVIVSFGSGLFVPLDQLPKVVQNLAPYLPSYHLAQLGWSAVTGQGSSGSHWAW
LAGYTLVCGGVAVWAYRRDEARGQ

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 28030; Mature: 27899

Theoretical pI: Translated: 10.32; Mature: 10.32

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTFAPTASVPTRRVPVLPLLTQLVLAELRRMARSPMFAVGTLGFPVLWFALFALPHVHK
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
TMDSGANVGQYLLVSFATYALLSLAMFSFGAAVANERTGGWLRLLRASPLPATLYLAAKL
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCHHHHHHHHH
LAALVFSALSLTLLYAFAHFAGGVTFPVGQGLLIAGKLLVGMIPLIALGLCIGFLSNPAS
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
ASVLANILSVIVSFGSGLFVPLDQLPKVVQNLAPYLPSYHLAQLGWSAVTGQGSSGSHWA
HHHHHHHHHHHHHHCCCCEECHHHHHHHHHHHHHHCCCHHHHHHCHHHHCCCCCCCCCHH
WLAGYTLVCGGVAVWAYRRDEARGQ
HHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TTFAPTASVPTRRVPVLPLLTQLVLAELRRMARSPMFAVGTLGFPVLWFALFALPHVHK
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
TMDSGANVGQYLLVSFATYALLSLAMFSFGAAVANERTGGWLRLLRASPLPATLYLAAKL
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCHHHHHHHHH
LAALVFSALSLTLLYAFAHFAGGVTFPVGQGLLIAGKLLVGMIPLIALGLCIGFLSNPAS
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
ASVLANILSVIVSFGSGLFVPLDQLPKVVQNLAPYLPSYHLAQLGWSAVTGQGSSGSHWA
HHHHHHHHHHHHHHCCCCEECHHHHHHHHHHHHHHCCCHHHHHHCHHHHCCCCCCCCCHH
WLAGYTLVCGGVAVWAYRRDEARGQ
HHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]