| Definition | Deinococcus geothermalis DSM 11300, complete genome. |
|---|---|
| Accession | NC_008025 |
| Length | 2,467,205 |
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The map label for this gene is 94984231
Identifier: 94984231
GI number: 94984231
Start: 113498
End: 113932
Strand: Reverse
Name: 94984231
Synonym: Dgeo_0123
Alternate gene names: NA
Gene position: 113932-113498 (Counterclockwise)
Preceding gene: 94984236
Following gene: 94984229
Centisome position: 4.62
GC content: 67.36
Gene sequence:
>435_bases ATGAAACAGCTCCTGCTGCTTCCGGCCTTGGCCCTGGGCCTCTCAGCGTGTGCGGGCAGCACGCCACCGCTGGCCGCGCC CACCATCAACGTGAGCGGCACCTGGGTGGCGACGCTCGCGCCGGGCGCGACGTTTCCGCAGCAAGTCTTCCGCTTCACCT TGACGCAAAGGGGTCATGTTCTGAGCGGTCAGGCCGAGATCGTCCCTGACCCTGCGGGCGCTGCGCCGCCGTACACATAC GACGCCTTTGGCCAGGTCAGCGGCATCGTCAGCGGCGACCGGTTCAACTTCACCGCTCGCGGAACGGGTGACTTCGCCGG GAGTGTCACCCTCTCCGGCACGGTGGTGGAGAACAAGTTGACAGGCACGTGGGTGGGCTTTGGCGGCCAGGGCTGGAGCG ACACGGGCAGCTTCAGCGCCATCCCCCAGGACTGA
Upstream 100 bases:
>100_bases AAAAGGCAGTCGCGCCTATCCTGCTTAATCCGATTGAAGAAGTCAAGTTTAAAGGTGATGCCGGGAGCTGCGAGCTGCCT AGAGAACGCTAGGCTGAGGC
Downstream 100 bases:
>100_bases CCCGCCGCACTACAGTTCGGCCAGTTTGGCCAAAACCAGCTCAGGCCGCACGGTATAGTCGCCCGTCTGGGCCTCCACAT ACTCGAAGCGCACCACGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 144; Mature: 144
Protein sequence:
>144_residues MKQLLLLPALALGLSACAGSTPPLAAPTINVSGTWVATLAPGATFPQQVFRFTLTQRGHVLSGQAEIVPDPAGAAPPYTY DAFGQVSGIVSGDRFNFTARGTGDFAGSVTLSGTVVENKLTGTWVGFGGQGWSDTGSFSAIPQD
Sequences:
>Translated_144_residues MKQLLLLPALALGLSACAGSTPPLAAPTINVSGTWVATLAPGATFPQQVFRFTLTQRGHVLSGQAEIVPDPAGAAPPYTY DAFGQVSGIVSGDRFNFTARGTGDFAGSVTLSGTVVENKLTGTWVGFGGQGWSDTGSFSAIPQD >Mature_144_residues MKQLLLLPALALGLSACAGSTPPLAAPTINVSGTWVATLAPGATFPQQVFRFTLTQRGHVLSGQAEIVPDPAGAAPPYTY DAFGQVSGIVSGDRFNFTARGTGDFAGSVTLSGTVVENKLTGTWVGFGGQGWSDTGSFSAIPQD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14703; Mature: 14703
Theoretical pI: Translated: 4.82; Mature: 4.82
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQLLLLPALALGLSACAGSTPPLAAPTINVSGTWVATLAPGATFPQQVFRFTLTQRGHV CCCHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCEEEEECCCCCCHHHHHHHHHCCCCEE LSGQAEIVPDPAGAAPPYTYDAFGQVSGIVSGDRFNFTARGTGDFAGSVTLSGTVVENKL ECCCCEEEECCCCCCCCCCCCCCCCEECEECCCCEEEEECCCCCCCCEEEEEEEEECCCC TGTWVGFGGQGWSDTGSFSAIPQD CEEEEECCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKQLLLLPALALGLSACAGSTPPLAAPTINVSGTWVATLAPGATFPQQVFRFTLTQRGHV CCCHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCEEEEECCCCCCHHHHHHHHHCCCCEE LSGQAEIVPDPAGAAPPYTYDAFGQVSGIVSGDRFNFTARGTGDFAGSVTLSGTVVENKL ECCCCEEEECCCCCCCCCCCCCCCCEECEECCCCEEEEECCCCCCCCEEEEEEEEECCCC TGTWVGFGGQGWSDTGSFSAIPQD CEEEEECCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA