| Definition | Deinococcus geothermalis DSM 11300, complete genome. |
|---|---|
| Accession | NC_008025 |
| Length | 2,467,205 |
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The map label for this gene is 94984223
Identifier: 94984223
GI number: 94984223
Start: 107434
End: 107910
Strand: Reverse
Name: 94984223
Synonym: Dgeo_0115
Alternate gene names: NA
Gene position: 107910-107434 (Counterclockwise)
Preceding gene: 94984224
Following gene: 94984220
Centisome position: 4.37
GC content: 56.18
Gene sequence:
>477_bases ATGAAAAAGAGCCTCTCTCTGTTGGCACTTCCATTGGCCCTGGCTTCTTGTGGTCTGTTCGGTCTTCCCAAGGGGGACGT GACCGGCAGCATCTACGGCTCGCCCAATCAGAATGGCAATATTCGTCTTGCCCTGATCGGCGCCGCAGGCTATCAAAACA ACTCGGTGGATCAGGTTGATGTGGGCACCTTGAACCCGCAAAAGAGCGTCTACGCCGTGACGCTGCCGAGCAGCCCCAAG GATGGTTACTACGAACTGCTGGCCTACGTGGACAGCAACGCCAACAACAAGTACGATGCCGACACCGAAAAACGCACCCA AAGCAACGGCAAGGTGATGGTCTACAGTGCCAATGGCCTGGGCAACAAGGATGGCAGCAACCTGCTGAACCTCAAGCCGG GCTGGAGTCTGATTCAGAATGGCCAGGTGGTCAAGAGCGGCCTGCCCTTTAACAGCTACGACCTGAACTGGCAGTAA
Upstream 100 bases:
>100_bases ATGAGGCCCCCTGATCTCTGATCAGTTCGTGAGAGCAGCGTTGGAAGTTGTTTGAGAGCCAACTGATCTATGACCTCTAG GCAGAAGGTAGCGTGACGCC
Downstream 100 bases:
>100_bases AGCAGTAAAGCGGCCAAACACCCCAGGCAGGAGCGGTTTTCGTGGGCCGCTCCTGCCTTCTGCTCGCCGCCTTCAGCACT CGCTTTCAGCACGGCCCGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 158; Mature: 158
Protein sequence:
>158_residues MKKSLSLLALPLALASCGLFGLPKGDVTGSIYGSPNQNGNIRLALIGAAGYQNNSVDQVDVGTLNPQKSVYAVTLPSSPK DGYYELLAYVDSNANNKYDADTEKRTQSNGKVMVYSANGLGNKDGSNLLNLKPGWSLIQNGQVVKSGLPFNSYDLNWQ
Sequences:
>Translated_158_residues MKKSLSLLALPLALASCGLFGLPKGDVTGSIYGSPNQNGNIRLALIGAAGYQNNSVDQVDVGTLNPQKSVYAVTLPSSPK DGYYELLAYVDSNANNKYDADTEKRTQSNGKVMVYSANGLGNKDGSNLLNLKPGWSLIQNGQVVKSGLPFNSYDLNWQ >Mature_158_residues MKKSLSLLALPLALASCGLFGLPKGDVTGSIYGSPNQNGNIRLALIGAAGYQNNSVDQVDVGTLNPQKSVYAVTLPSSPK DGYYELLAYVDSNANNKYDADTEKRTQSNGKVMVYSANGLGNKDGSNLLNLKPGWSLIQNGQVVKSGLPFNSYDLNWQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16847; Mature: 16847
Theoretical pI: Translated: 8.88; Mature: 8.88
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKSLSLLALPLALASCGLFGLPKGDVTGSIYGSPNQNGNIRLALIGAAGYQNNSVDQVD CCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCEEEEEEEECCCCCCCCCEEE VGTLNPQKSVYAVTLPSSPKDGYYELLAYVDSNANNKYDADTEKRTQSNGKVMVYSANGL CCCCCCCCCEEEEECCCCCCCCCEEEEEEEECCCCCCCCCCCHHHHCCCCEEEEEECCCC GNKDGSNLLNLKPGWSLIQNGQVVKSGLPFNSYDLNWQ CCCCCCCEEEECCCCHHHCCCEEEECCCCCCCCCCCCC >Mature Secondary Structure MKKSLSLLALPLALASCGLFGLPKGDVTGSIYGSPNQNGNIRLALIGAAGYQNNSVDQVD CCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCEEEEEEEECCCCCCCCCEEE VGTLNPQKSVYAVTLPSSPKDGYYELLAYVDSNANNKYDADTEKRTQSNGKVMVYSANGL CCCCCCCCCEEEEECCCCCCCCCEEEEEEEECCCCCCCCCCCHHHHCCCCEEEEEECCCC GNKDGSNLLNLKPGWSLIQNGQVVKSGLPFNSYDLNWQ CCCCCCCEEEECCCCHHHCCCEEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA